Clavibacter seminis: KYT88_08925
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Entry
KYT88_08925 CDS
T11076
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
csei Clavibacter seminis
Pathway
csei03030
DNA replication
csei03430
Mismatch repair
csei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KYT88_08925
03430 Mismatch repair
KYT88_08925
03440 Homologous recombination
KYT88_08925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csei03032
]
KYT88_08925
03400 DNA repair and recombination proteins [BR:
csei03400
]
KYT88_08925
Enzymes [BR:
csei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KYT88_08925
DNA replication proteins [BR:
csei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KYT88_08925
DNA repair and recombination proteins [BR:
csei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KYT88_08925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Tenui_N
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UKF23856
UniProt:
A0ABY3T4V0
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All DBs
Position
1887008..1887709
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AA seq
233 aa
AA seq
DB search
MTSRWHDTLASFDLETTGVDVETARIVTACIVVLDAQGEVLERHDWLADPGVEIPAGAAA
IHGVTTERARAEGRDAAVVVLEIVTTIREMFARGLALVVYNAPYDLTLLNREAVRHGVEP
LRDTGPVIDPLVIDKAVDTYRRGKRTLSVAAEHYGVRLDDAHDAGADAIAAGRVAQAIAG
RYADQLDIPVLDLHDRQVDWSRVQAESFQDYMRRTRDPAFTTSGAWPERHVGA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccgctggcacgacaccctggcctcgttcgacctcgagacgacgggggtggac
gtcgagaccgcgcgcatcgtcacggcgtgcatcgtcgtcctcgacgcgcagggcgaggtc
ctcgaacgacacgactggctcgcggatcccggcgtcgagatccccgcgggcgcggccgcc
atccacggcgtcacgacggagcgcgccagggccgagggacgcgacgccgcggtggtcgtc
ctcgagatcgtcaccaccatccgcgagatgttcgcccgcggcctcgcgctcgtggtctac
aacgcgccctacgacctcacgctgctcaaccgcgaggccgtgcgtcacggcgtggagccg
ctgcgcgacaccggccccgtgatcgacccgctcgtcatcgacaaggccgtggacacctac
cgccgcggcaagcgcacgctgtccgtcgcggccgagcactacggcgtccgactcgacgac
gcacacgacgccggcgccgacgccatcgccgccggtcgagtcgcccaggccatcgccggc
cgctacgccgaccagctcgacatccccgtgctggacctgcacgaccgccaggtcgactgg
tcgcgcgtgcaggcggagagcttccaggactacatgcggcgcacgcgcgatccggcgttc
accacatccggagcctggccggagcgacacgtcggagcctga
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