Clavibacter seminis: KYT88_10500
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Entry
KYT88_10500 CDS
T11076
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
csei Clavibacter seminis
Pathway
csei00300
Lysine biosynthesis
csei00470
D-Amino acid metabolism
csei01100
Metabolic pathways
csei01110
Biosynthesis of secondary metabolites
csei01120
Microbial metabolism in diverse environments
csei01230
Biosynthesis of amino acids
Module
csei_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KYT88_10500 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KYT88_10500 (dapF)
Enzymes [BR:
csei01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KYT88_10500 (dapF)
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Paralog
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UKF24152
UniProt:
A0ABY3TAA8
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All DBs
Position
complement(2220742..2221620)
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AA seq
292 aa
AA seq
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MADLQFTKGQGTGNDFVLFADPAGEIDLTDTQVQALCDRHFGIGADGTIRAVLSSRIPEG
RAALEEDPDAEWFMDYRNVDGSPAEMCGNGIRVFTLFLIENGLIELPPGRTIPIGTRAGV
RDVQRSGSGFQVDLGRWELAGGEPLVRAKDLQVARPGLGIDVGNPHVVVALSSEDELAEA
DLAFVPQLDPEPAAGANVELVVPADPLVVDGVGHITMRVHERGSGETLSCGTGAAAAALA
TRHWAGAAAPHQWRVQLPGGALGVRMFPTEDGEHVGLSGPAELVFDGVVALA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcagacctgcagttcaccaagggccagggcacgggcaacgacttcgtgctgttcgcg
gatcccgcgggcgagatcgacctgaccgacacgcaggtgcaggccctctgcgaccgccac
ttcggcatcggcgccgacgggacgatacgcgcggtgctctcgagtcgcatccccgagggc
cgcgccgccctcgaggaggatccggacgccgagtggttcatggactaccgcaacgtcgac
ggcagccccgccgagatgtgcggcaacgggatccgcgtcttcacgctcttcctcatcgag
aacggcctcatcgagctgcccccgggacgcacgatccccatcggcacccgggctggtgtc
cgcgacgtccagcgcagcggatccggcttccaggtcgacctcggccgctgggagctggcg
gggggcgagcccctcgtgcgcgccaaggacctccaggtcgcgcgtccgggcctcggcatc
gacgtcggcaacccgcacgtggtggtcgcgctgtcgagcgaggacgagctcgcggaggcc
gacctcgcgttcgtgccgcagctggatcccgagcccgccgccggcgcgaacgtcgagctg
gtggtgccggcggatccgctcgtcgtcgacggggtgggccacatcaccatgcgcgtccac
gagcgcgggagcggcgagacgctgagctgcgggaccggcgccgcggcggcggccctcgcg
acgcggcactgggcgggcgccgcagcaccgcaccagtggcgcgtgcagctgccgggcggt
gcgctcggcgtccgcatgttcccgacggaggacggcgagcacgtgggcctgtcgggaccg
gccgagctggtcttcgacggggtcgtggcgctggcctga
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