Clavibacter seminis: KYT88_11175
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Entry
KYT88_11175 CDS
T11076
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csei Clavibacter seminis
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csei03016
]
KYT88_11175 (truB)
Enzymes [BR:
csei01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KYT88_11175 (truB)
Transfer RNA biogenesis [BR:
csei03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KYT88_11175 (truB)
Prokaryotic type
KYT88_11175 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
UKF24285
UniProt:
A0ABY3T5Q3
LinkDB
All DBs
Position
complement(2362421..2363380)
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AA seq
319 aa
AA seq
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METPTPRAAPSTASGLLLIDKRGEWTSHDLVARTRRLAGTRKVGHAGTLDPMATGLMILG
VNSSTRLLTHLVGLDKEYLATIRLGRATTTDDREGEVVSRAEPGRIRDLAVADVERAVAD
LRGTISQVPSAVSAIKVDGKRAYARVRAGEDVELAAREVTVSAFDVLRFDAVEPEEGEED
GAQLDLDVRITCSSGTYVRALARDLGRALGVGGHLTALRRTRVGPFHVDDAVPIDEMVVA
DRLIPPADAAARLFDVLHLTEQEAVDLGHGKKLTTPDEAPTEDPLAAVAPDGRLVGLVGF
RGRTGTSIVNFPADDRGAS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccccgaccccccgcgccgcgccctcgaccgcgagcggcctgctcctcatcgac
aagcgcggcgagtggaccagccacgacctcgtcgcccgcacgcgccgcctcgccggcacc
cgcaaggtcgggcacgcgggcacgctcgacccgatggcgaccggcctcatgatcctcggc
gtcaacagctccacgcgcctgctcacccacctcgtcggcctcgacaaggagtacctggcg
accatccgcctcggccgcgccaccacgaccgacgaccgcgagggcgaggtcgtctcgcgt
gccgagcccgggcggatccgcgacctcgccgtcgccgacgtggagcgcgccgtcgccgac
ctccgcggcacgatctcgcaggtgccgagcgccgtgagcgccatcaaggtcgacggcaag
cgcgcctacgcccgcgtccgcgccggcgaggacgtcgagctcgccgcgcgcgaggtcacc
gtctccgcgttcgacgtgctgcgcttcgacgcggtggagcccgaggagggcgaggaggac
ggcgcgcagctcgacctcgacgtgcgcatcacctgctcgtccggcacctacgtgcgggcg
ctcgcgcgcgacctcgggcgcgcgctcggcgtcggcgggcacctcaccgcgctccgccgc
acgcgcgtcggccccttccacgtcgacgacgcggtgccgatcgacgagatggtcgtcgcc
gaccgcctcatcccgccggccgacgccgccgcgcgcctcttcgacgtgctgcacctcacc
gagcaggaggccgtcgacctcgggcacggcaagaagctcacgacgcccgacgaggcgccg
acggaggatccgctcgccgcggtcgcgcccgacggccggctcgtggggctggtcggcttc
cgcggtcgcaccggcacgtccatcgtcaacttcccggccgacgaccggggcgcgtcgtga
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