Clavibacter seminis: KYT88_11435
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Entry
KYT88_11435 CDS
T11076
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
csei Clavibacter seminis
Pathway
csei00260
Glycine, serine and threonine metabolism
csei00630
Glyoxylate and dicarboxylate metabolism
csei00670
One carbon pool by folate
csei00785
Lipoic acid metabolism
csei01100
Metabolic pathways
csei01110
Biosynthesis of secondary metabolites
csei01200
Carbon metabolism
Module
csei_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KYT88_11435 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KYT88_11435 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KYT88_11435 (gcvP)
00670 One carbon pool by folate
KYT88_11435 (gcvP)
Enzymes [BR:
csei01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
KYT88_11435 (gcvP)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF4450
Motif
Other DBs
NCBI-ProteinID:
UKF24334
LinkDB
All DBs
Position
complement(2432428..2435403)
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AA seq
991 aa
AA seq
DB search
MTAVDAGTRPATPAPASAPDIAEESSTFAPGAFGARHIGIDSEARATMLGVLGHDSIPSL
LAKAVPETIQVDRFRTEGDSVLPEAATERDALAELRRIAGRNRVRTSMIGLGYHDTITPA
VITRNVLENPSWYTAYTPYQPEISQGRLEALINFQTMVAELSGLATANASMLDEATAVVE
GMLLARRASKAKTDVFLIDADALPQTRALLESRAAAVGIELVAHDLATVDPAELPDAFGA
FIQYPAASGRVWDPSAVIARVHEAGGLAVVAADLLALTVITSPGELGADIAVGTSQRFGV
PMGFGGPHAGYLAVRAGLERQMPGRLVGVSQDAAGHPAYRLSLQTREQHIRREKATSNIC
TAQVLLAVMASMYAVYHGPKGLRVIARQANRGARRLVRSLATVGVSPVHAAFFDTVRVSV
PGRADEILAAAADGGVNLLRVDADTIGFSVDEATRPEDLAVVARAFGAELAEDEGAAGDL
SSIPEASIRTSEYLTHAVFSTHRSETGMMRYLKRLSDKDYALDRGMIPLGSCTMKLNAAT
EMEAVTWPEFQAIHPFAPADDVEGYLELVLQLETWLADVTGYDTVSLQPNAGSQGELAGL
LAIRGYHLANGDDARTVCLIPQSAHGTNAASAVLAGMRVVVVACDELGNVDLDDLRAKIA
AHRDELAGLMITYPSTHGVYEHEVGAICQAVHEAGGQVYVDGANLNALLGFARFGDFGGD
VSHLNLHKTFCIPHGGGGPGVGPVAAKAHLAPFLPGHPQAQRNVHALVQDGVVSTIEHGG
APVSAAPYGSPSILPISWAYVRMMGAEGLKQATGAAVLSANYIAARLRDHYPVLYAGEDG
LVAHECILDLRPLTAATGITVDDVAKRLVDYGFHAPTMSFPVPGTLMVEPTESEDLAEVE
RFIAAMIGIKQEAGSVAAGEWPADDNPLRNAPHTAESVIAGEWTHAYTRERAVYPVSTLV
RDKYWPPVRRIDQAYGDRNLFCACPPPEAFA
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgtcgacgccggcacgcgcccggccaccccggctcccgcctccgcacccgac
atcgcggaggagtcctcgacgttcgcgcccggcgcgttcggcgcccgccacatcggcatc
gactccgaggcccgcgccaccatgctcggcgtcctcggtcacgactcgatcccgtccctc
ctcgcgaaggccgtgcccgagacgatccaggtcgaccgcttccgcaccgagggcgactcc
gttctgcccgaggccgccaccgagcgcgacgccctcgccgagctccgccgcatcgcgggc
cgcaaccgcgtgcgcacgtcgatgatcggcctcggctaccacgacacgatcacgcccgcc
gtgatcacccggaacgtgctcgagaacccgagctggtacacggcgtacacgccgtatcag
ccggagatctcgcagggccgcctcgaggcgctcatcaacttccagacgatggtcgccgag
ctgtccgggctcgcgaccgcgaacgcgtccatgctcgacgaggccacggccgtcgtcgag
ggcatgctgctcgcgcgccgcgcctccaaggcgaagacggacgtgttcctcatcgacgcc
gacgccctgccgcagacgcgcgcgctcctcgagagccgggccgcggccgtcggcatcgag
ctggtcgcgcacgacctcgccacggtggatccggccgagctgcccgacgcgttcggcgcc
ttcatccagtacccggccgcctccggccgcgtctgggacccgagcgccgtcatcgcgcgc
gtgcacgaggccggcggcctcgcggtcgtcgcggccgacctgctcgccctcacggtcatc
acctcgccgggcgagctcggcgcggacatcgcggtcggcacctcgcagcgcttcggcgtg
cccatgggcttcggcggtccgcacgcgggctacctcgccgtgcgcgcgggactcgagcgg
cagatgcccggccgcctcgtcggcgtcagccaggacgcggccggccaccccgcataccgc
ctctcgctgcagacgcgcgagcagcacatccgccgtgagaaggccaccagcaacatctgc
accgcgcaggtgctcctcgccgtgatggcctcgatgtacgcggtctaccacgggccgaag
ggcctccgcgtgatcgcgcgccaggcgaaccggggcgcccgccgcctcgtccgctcgctc
gcgaccgtcggcgtctcgcccgtccacgccgcgttcttcgacaccgtgcgcgtctccgtg
cccggccgcgccgacgagatcctcgcggcggccgcggatggcggggtcaacctgctccgc
gtggacgccgacacgatcggcttcagcgtcgacgaggccacgcgccccgaggacctcgcg
gtcgtcgcgcgcgcgttcggcgccgagctcgcggaggacgagggcgcggccggcgacctg
tcctcgattcccgaggcgtcgatccgcacgagcgagtacctcacgcacgccgtgttctcc
acgcaccgctccgagaccggcatgatgcgctacctcaagcgcctctccgacaaggactac
gcgctcgaccgcggcatgatcccgctcggctcctgcaccatgaagctcaacgcggcgacc
gagatggaggcggtgacctggcccgagttccaggccatccaccccttcgcgccggctgac
gacgtcgagggctacctcgagctggtcctccagctggagacctggctcgcggacgtcacg
ggctacgacaccgtgagcctccagccgaacgccggcagccagggcgagctcgcgggcctc
ctcgcgatccgcggctaccacctcgcgaacggcgacgacgcgcgcacggtctgcctcatc
ccgcagagcgcgcacggcacgaacgcggccagcgccgtgctggccggcatgcgcgtcgtg
gtcgtcgcgtgcgacgagctcggcaacgtcgacctcgacgacctgcgcgccaagatcgcc
gcgcaccgcgacgagctcgcgggcctcatgatcacgtacccctccacccacggcgtctac
gagcacgaggtcggcgcgatctgccaggccgtgcacgaggcaggcggccaggtctacgtc
gacggcgcgaacctcaacgcgctcctcggcttcgcccggttcggcgacttcggcggcgac
gtctcgcacctcaacctgcacaagacgttctgcatcccgcacggcggcggcggacccggc
gtgggcccggtcgcggcgaaggcgcacctcgcgcccttcctgcccggccacccgcaggcg
cagcgcaacgtgcacgcgctcgtccaggacggggtcgtctcgaccatcgagcacggcggc
gccccggtgtcggcggctccgtacggatccccgagcatcctgccgatcagctgggcctac
gtccgcatgatgggcgcggaggggctcaagcaggcgaccggtgccgcggtcctctcggcg
aactacatcgccgcgcgcctccgcgaccactaccccgtgctctacgcgggggaggacggc
ctcgtcgcgcacgagtgcatcctcgacctgcgtccgctgaccgccgcgaccggcatcacg
gtggacgacgtggccaagcgcctcgtcgactacggcttccacgcgcccaccatgagcttc
ccggtccccggcacgctcatggtcgagccgacggagagcgaggacctcgccgaggtcgag
cgcttcatcgcggcgatgatcggcatcaagcaggaggccggctcggtcgccgcgggcgag
tggccggccgacgacaacccgctgcggaacgcgccgcacacggccgagtcggtcatcgcg
ggggagtggacgcacgcgtacacgcgcgagcgcgccgtctacccggtgtcgaccctcgtg
cgcgacaagtactggccgccggtgcgccgcatcgaccaggcgtacggcgaccgcaacctg
ttctgcgcctgcccgccgccggaggcgttcgcctga
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