KEGG   Clavibacter seminis: KYT88_11575
Entry
KYT88_11575       CDS       T11076                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
csei  Clavibacter seminis
Pathway
csei03030  DNA replication
csei03430  Mismatch repair
csei03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KYT88_11575
   03430 Mismatch repair
    KYT88_11575
   03440 Homologous recombination
    KYT88_11575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csei03032]
    KYT88_11575
   03400 DNA repair and recombination proteins [BR:csei03400]
    KYT88_11575
Enzymes [BR:csei01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KYT88_11575
DNA replication proteins [BR:csei03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     KYT88_11575
DNA repair and recombination proteins [BR:csei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     KYT88_11575
SSDB
Motif
Pfam: RNase_T Rv2179c-like DUF1265
Other DBs
NCBI-ProteinID: UKF24361
LinkDB
Position
2458069..2458698
AA seq 209 aa
MPLDFTAIDFETANNSSASACSVGLVKVRDGVVVETASWLIRPPAGHDTFSVWNTRIHGI
VEDDVAGADGWADQLPRLMAFAGDDHLVAHNARFDMGVIQGACKATALITPPYSYLCSLQ
VARRTYALDSYRLPVAARAAGFEDFSHHEALADARACAAIVVHAAGRHGAASIAGLAEAA
GVGLGRIGAPRTQTVTQASAAATPPIDWA
NT seq 630 nt   +upstreamnt  +downstreamnt
atgccgttggacttcaccgcgatcgacttcgagaccgccaacaactcgtcggcgagcgcg
tgctcggtgggtctcgtgaaggtgcgcgacggcgtcgtcgtcgagaccgcgtcctggctc
atccggccgccggcggggcacgacaccttctcggtctggaacacgcggatccacggcatc
gtcgaggacgacgtggccggcgccgacggctgggccgaccagctgccgcgcctcatggcc
ttcgcgggcgacgaccacctcgtcgcccacaacgcgcgcttcgacatgggcgtgatccag
ggcgcgtgcaaggccaccgcgctcatcacgccgccgtactcctacctctgcagcctccag
gtcgcgcgtcgcacctacgcgctcgactcgtaccggctgccggtcgccgcgcgggccgcg
ggcttcgaggacttctcgcaccacgaggcgctggcggacgcacgggcgtgcgcagcgatc
gtcgtgcacgcggccggacggcacggcgccgcgtcgatcgccgggctggcggaggccgcg
ggcgtgggcctcggccgcatcggcgcgccgcgcacgcagaccgtcacgcaggcgtccgcc
gccgcgacgccgcccatcgactgggcctga

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