Clavibacter seminis: KYT88_12510
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Entry
KYT88_12510 CDS
T11076
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
csei Clavibacter seminis
Pathway
csei00061
Fatty acid biosynthesis
csei00071
Fatty acid degradation
csei01100
Metabolic pathways
csei01212
Fatty acid metabolism
csei02024
Quorum sensing
csei04146
Peroxisome
Module
csei_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KYT88_12510
00071 Fatty acid degradation
KYT88_12510
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KYT88_12510
09145 Cellular community - prokaryotes
02024 Quorum sensing
KYT88_12510
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
csei01004
]
KYT88_12510
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csei04147
]
KYT88_12510
Enzymes [BR:
csei01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KYT88_12510
Lipid biosynthesis proteins [BR:
csei01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KYT88_12510
Exosome [BR:
csei04147
]
Exosomal proteins
Exosomal proteins of breast milk
KYT88_12510
Exosomal proteins of breast cancer cells
KYT88_12510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UKF24535
LinkDB
All DBs
Position
complement(2641063..2642649)
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AA seq
528 aa
AA seq
DB search
MSSDTPLQPEHEQPHGGFSTVSVAAILAESAERHADRVAVVVGDVSTTYRELWDETRAYA
GALRDRGVGEGTRVAMLIPNVADFPRVYYAVLALGGVVVPVHALLKSEEIAYVLRDSGST
LMVCAGPLLEQGARGAALAEVPVISVLVPAATEGGPDRLEELARAATPIRTYVPRRPSDT
ATILYTSGTTGQPKGAEGSHLALVMQVDVLILDTFDLRAGDRILGCLPLFHTFGQTCTMN
ASFRAGATIVMVPRFDGDTALALMVEHETQVFMGVPTMYFALLAAAARNPARPSLRYAIS
GGAAIPVAVIDAFREQFDAEIHEGYGLTETSPVASFNHVGVPARPGTVGKPIWGVQIEIA
DPEHEDRVELVERGTLGEIVIRGHNLMNGYLHRPEDTARAVVDGWFRSGDLGTIDEDGYI
RVVDRTKDMILRNGYNVYPREVEEVLARHEAVAQCAVFGVPHEEHGQEIVAAIVPKADAM
VDAAEVVAYMKERIASYKYPRRVEVVEALPLGPSGKILKRTLVERFGA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgacacgcccctccagcccgagcacgagcagccgcacggcgggttctccacc
gtctcggtcgccgcgatcctcgccgagtccgccgaacggcacgccgaccgggtcgccgtg
gtcgtcggcgacgtctccaccacctaccgcgagctctgggacgagacgcgcgcctacgcc
ggcgccctccgcgaccgcggggtgggggaggggacgcgcgtcgcgatgctcatcccgaac
gtcgccgacttcccgcgcgtctactacgcggtgctcgcgctcggcggcgtggtcgtgccc
gtgcacgcgctgctgaagagcgaggagatcgcgtacgtgctgcgcgactccggatccacg
ctcatggtctgcgccggccccctgctcgagcagggcgcgaggggtgccgcgctcgcggag
gtgcccgtgatcagcgtgctcgtgccggccgccaccgagggcgggcccgaccggctggag
gagctcgcgcgggccgcgacgcccatccgcacctacgtgccgcgtcggccgtcggacacc
gcgacgatcctctacacgtccggcaccaccggccagccgaagggcgcggagggcagccac
ctggcgctcgtgatgcaggtcgacgtgctcatcctcgacaccttcgacctgcgtgcgggc
gaccggatcctcggctgcctgcccctgttccacaccttcgggcagacctgcaccatgaac
gcgtcgttccgggccggcgcgaccatcgtgatggtgccccgcttcgacggcgacaccgcg
ctcgcgctcatggtcgagcacgagacgcaggtgttcatgggcgtgcccaccatgtacttc
gcgctgctcgcggccgccgcccggaaccccgcgcgcccgtccctgcgctacgccatctcg
ggcggcgccgcgatccccgtggccgtcatcgacgcgttccgcgagcagttcgacgccgag
atccacgagggctacggcctcacggagacctcgcccgtcgcgtcgttcaaccacgtcggc
gtgcctgcccggcccggcaccgtcgggaagccgatctggggcgtgcagatcgagatcgcc
gaccccgagcacgaggaccgcgtggagctcgtcgagcggggcacgctcggcgagatcgtg
atccgcggccacaacctcatgaacgggtacctgcaccgccccgaggacacggcccgcgcg
gtcgtcgacggctggttccgctcgggcgacctcggcaccatcgacgaggacggctacatc
cgcgtcgtcgaccggacgaaggacatgatcctgcgcaacggctacaacgtgtacccgcgc
gaggtcgaggaggtgctcgcccggcacgaggccgtcgcgcagtgcgccgtgttcggcgtg
ccgcacgaggagcacgggcaggagatcgtcgcggcgatcgtgccgaaggcggacgccatg
gtcgacgcggcggaggtcgtcgcgtacatgaaggagcgcatcgcgtcgtacaagtacccg
cggcgggtcgaggtggtcgaggcgctgccgctcgggccgagcggcaagatcctcaagcgg
acgctcgtcgagcggttcggcgcgtga
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