Clavibacter seminis: KYT88_13135
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Entry
KYT88_13135 CDS
T11076
Name
(GenBank) LysR family transcriptional regulator
Organism
csei Clavibacter seminis
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
MarR_2
HTH_24
HTH_30
HTH_5
HTH_AsnC-type
HTH_28
HTH_23
Fe_dep_repress
Sigma70_r4
MarR
HTH_Tnp_ISL3
HTH_10
HTH_IclR
HTH_50
Motif
Other DBs
NCBI-ProteinID:
UKF24652
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Position
complement(2775363..2776220)
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AA seq
285 aa
AA seq
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MLDPTLLATFLAVADTRSFTQAAARLGISQPTVSQQVRRLERAVDRTLIARDTRAMRLTD
AGDAMAGFARTILAAHRAAESYFGGSEVSGRLRFGTADDLAITQLPRILRHFRQLHPQIE
LELTVTQSGPLHRRLLAGQLDLILTKTTVDEQPGARLVGRDRMVWVGLERTLVEPGATVP
LIAYRAPSISRQMAMDALEREGRTWRITCSTRDVNGVLAAVRAGMGVAVLPQALIPTDLV
KVTSRLGLPELDEVDYVLMDNPAGPRASIEALTSAIMSRGVTRAS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacccgaccctgctcgcgaccttcctcgccgtcgccgacacccgcagcttcacg
caggcggcggcgcggctcgggatcagccagcccaccgtgagccagcaggtgcgccggctc
gagcgggccgtcgaccggacgctcatcgcgcgcgacacccgggccatgcgcctcaccgac
gcgggcgacgcgatggccggcttcgcgcgcacgatcctcgcggcgcaccgcgcggcggag
agctacttcggcggatccgaggtgagcggccgcctgcgcttcggcacggcggacgacctg
gccatcacgcagctcccgcggatcctccgccacttccggcagctgcacccgcagatcgag
ctggagctcacggtgacgcagagcggcccgctgcaccggcggctgctcgcgggccagctc
gacctgatcctgaccaagaccacggtcgacgagcagccgggcgcgcgcctcgtgggccgc
gaccgcatggtgtgggtgggcctcgagcgcacgctcgtggagccgggcgcgaccgtgccg
ctcatcgcctaccgcgcaccgagcatcagcaggcagatggcgatggacgccctcgagcgg
gagggccgcacctggcggatcacgtgcagcacccgcgacgtgaacggcgtgctcgccgcc
gtgcgcgccggcatgggcgtggcggtgctgccgcaggcgctgatcccgacggacctcgtg
aaggtgacctcgcgcctcggcctgcccgagctcgacgaggtcgactacgtgctgatggac
aacccggccgggccgcgcgcgtccatcgaggcgctgacctcggcgatcatgtcgcgcggg
gtgacgcgggcgagctga
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