Clavibacter seminis: KYT88_13270
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Entry
KYT88_13270 CDS
T11076
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csei Clavibacter seminis
Pathway
csei03420
Nucleotide excision repair
csei03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KYT88_13270
03430 Mismatch repair
KYT88_13270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csei03400
]
KYT88_13270
Enzymes [BR:
csei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KYT88_13270
DNA repair and recombination proteins [BR:
csei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KYT88_13270
MMR (mismatch excision repair)
Other MMR factors
KYT88_13270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
AAA_11
ResIII
PPS_PS
Motif
Other DBs
NCBI-ProteinID:
UKF24674
LinkDB
All DBs
Position
complement(2815571..2818021)
Genome browser
AA seq
816 aa
AA seq
DB search
MSSDPAAISPSSTPIILDGRSGAAGGSGAPEDPLLEGLNPEQREAVVYRGPALLIVAGAG
SGKTRVLTHRIASLIESREAWPSQILAITFTNKAAAEMRERVESLLGQASEGMWISTFHS
ACVRILRREAEAFGFTQNFTIYDSADSRVLIKRIIKQLDADTLGFTVSSVSGRISKLKNE
LSDADTFARTANFNDPAEAMFVEIFRQYTRSLASANAFDFDDLIGQTVYLFRAFPKVAAL
YQRRFRHVLVDEYQDTNHAQYSLIRELTRAVAPEDVPVDTRMSTNGMGGIDGASLTVVGD
SDQSIYAFRGADIRNITEFERDFPQSKVVLLEQNYRSTQNILTAANAVISNNFDRKDKKL
WTSIGDGDKIVGFTGYSGHDEAQFVADEIQKLHEEGTAYSEIAVFYRTNAQTRALEEILI
RSAVPYRIMGGTKFYERAEIKDAMAYLIAVANPADVLALRRILNTPKRGIGPATETALAN
FAESHGVTFREAMRRASELGLGPKVTQAILTLSRMLDEVALLMDPERPEGRTSVGDLVTT
LLEKSGLVQALRASKDAQDEARAENVEELVAVTKEFSRNNPEGQLVDFLTEVSLVAAADE
LDDSSGTVSLMTLHTAKGLEYDSVFLTGVEEDLLPHRMSANEPGGPAEERRLFYVGITRA
RRRLFISLAMTRAQFGEVNVAMPSRYLQEIPAELIDWKQSPGMATSRGGTQPRALNARRE
GGGYGGRSRSSSGFEDPALPPPPRPKTQWANTVTGQVRDNGDLELAFGDRIRHTDFGDGR
VTGVTGEGRKRIAEVQFDGPAGRKRLLIKIAPIEKL
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgagttccgaccccgccgccatctccccctccagcacgccgatcatcctcgacggccgg
tcgggtgccgccggggggtcgggcgctccggaggatccgctgctggagggcctcaacccg
gagcagcgggaggccgtcgtctaccggggtcccgcgctgctcatcgtcgcgggcgccggt
tccggcaagacgcgcgtgctcacgcaccgcatcgccagcctcatcgagtcccgggaggcg
tggccgagccagatcctcgccatcaccttcacgaacaaggccgccgccgagatgcgcgag
cgcgtcgagtccctcctcgggcaggcgtccgagggcatgtggatctccaccttccactcc
gcgtgcgtgcgcatcctccgacgcgaggcggaggccttcggcttcacgcagaacttcacc
atctacgactccgcggacagccgcgtgctcatcaagcggatcatcaagcagctcgacgcg
gacacgctcggcttcaccgtctcgtcggtgtcgggccgcatatcgaagctcaagaacgag
ctgtcggacgcggacaccttcgcgcgcacggcgaacttcaacgatcctgccgaggccatg
ttcgtggagatcttccggcagtacacgcgctcgctcgcctccgccaacgccttcgacttc
gacgacctcatcggccagacggtctacctcttccgcgccttccccaaggtggcggcgctc
taccagcggcgcttccggcacgtgctcgtggacgagtaccaggacacgaaccacgcgcag
tactccctcatccgcgagctgacgcgcgccgtcgccccggaggacgtgcccgtcgacacc
cgcatgtccacgaacggcatgggcgggatcgacggggcctcgctcaccgtggtgggcgac
agcgaccagtcgatctacgccttccgcggcgccgacatccgcaacatcaccgagttcgag
cgcgacttcccgcagtcgaaggtcgtgctcctcgagcagaactaccggtcgacccagaac
atcctcaccgccgccaacgccgtcatctcgaacaacttcgaccgcaaggacaagaagctg
tggacctccatcggcgacggcgacaagatcgtcggcttcacggggtactcggggcacgac
gaggcgcagttcgtcgccgacgagatccagaagctgcatgaggagggcaccgcctactcg
gagatcgccgtcttctatcggaccaacgcgcagacgcgagcgctcgaggagatcctcatc
cgctcggccgtgccctaccggatcatgggcggcacgaagttctacgagcgggcggagatc
aaggacgccatggcgtacctgatcgccgtcgccaaccccgcggacgtgctggcgctgcgc
cgcatcctcaacaccccgaagcgcggcatcggccccgccacggagacggccctcgccaac
ttcgcggagtcgcacggcgtcaccttccgggaggccatgcgccgtgcgtccgagctgggg
ctcgggcccaaggtgacgcaggcgatcctcacgctctcgcgcatgctcgacgaggtcgcg
ctcctaatggaccccgagcggcccgaaggacggacgtccgtcggcgacctggtgaccacg
ctgctggagaagagcggcctggtccaggcgctccgggccagcaaggacgcgcaggacgag
gcccgcgcggagaacgtcgaggagctcgtcgccgtcaccaaggagttctcgcgcaacaat
cccgagggccagctggtcgacttcctcacggaggtctcgctcgtcgccgcggcggatgag
ctcgacgactcgagcggcaccgtgtccctcatgaccctccacacagcgaagggcctggag
tacgactcggtcttcctcaccggcgtggaggaggacctgctgccgcaccgcatgtcggcc
aacgagcccggcggcccggcggaggagcggcgcctgttctacgtcggcatcacacgagcc
cgtcggcgcctcttcatctccctcgcgatgacgcgggcccagttcggcgaggtcaacgtc
gccatgcccagccggtacctgcaggagatcccggccgagctcatcgactggaagcagtcg
cccggcatggccacatcgcgcggtggcacccaaccgcgcgccctcaacgcccggcgggag
ggaggcgggtacggcggtcgctcgcgctcgtcgagcggcttcgaggatccggcgctgccg
ccgccaccgcgacccaagacccagtgggccaacacggtcaccggccaggtgcgcgacaac
ggcgacctcgagctcgcgttcggcgaccgcatccgccacaccgacttcggcgacggccgt
gtcacgggcgtcacgggcgagggacgcaagcgcatcgccgaggtgcagttcgacggaccg
gccggtcgcaagcggctgctcatcaagatcgcgcccatcgagaagctctag
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