Clavibacter seminis: KYT88_13380
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Entry
KYT88_13380 CDS
T11076
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
csei Clavibacter seminis
Pathway
csei00470
D-Amino acid metabolism
csei01100
Metabolic pathways
csei01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KYT88_13380 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
KYT88_13380 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csei01011
]
KYT88_13380 (alr)
Enzymes [BR:
csei01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
KYT88_13380 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
csei01011
]
Precursor biosynthesis
Racemase
KYT88_13380 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
TsaE
Mur_ligase_C
AAA_18
AP_endonuc_2
MoCF_biosynth
cobW
AAA_22
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UKF24696
LinkDB
All DBs
Position
complement(2841162..2842889)
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AA seq
575 aa
AA seq
DB search
MSETVPVPAGPVAPGRRAVVDLDAIRHNVRTLAALAAPARTMVAVKADAYGHGALQVARA
ALEAGAESLAVLDVASAVELRRAGITARLLAWLHSVDTDFRVAVENGIDLGVSALWELER
IAAAGRATGMRARVHLKADTGLSRNGATPELWPDLVRAAVAADAAGELTLHALWSHLADA
SPEDDDAALARFHEAVRVAEELGARPVEKHLAASSAGIRLPAARFDMVRFGIAVYGISPF
DYRSGRDLGLIPAMTLEADVVSVKRVEAGHGVSYGLDHRTAGPSTLALVPLGYADGIPRI
AAPLASVLLNGRRFPIAGRIAMDQLVLDVGDLPVEVGDTAVILGPGDRGEPTAEEWAGWA
ETIGDEIVTRVGPRVDRVHLHERPDAEDVDAEDAAAEVLSDELVPVASTDDMEELGRALA
RELGAGDLVVLSGPLGAGKTTLTRGLGAGLGVRGPVTSPTFVLARTHPSLVDGPPLVHVD
AYRLADARELDDLDIDFARSVVVVEWGDGKLDGIAEEWWDLRIARPTGAGVADPDAAGHA
AADADADAAADADPDAAPEEPRTVRIRRLRARTRA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagaccgtgcccgtgcccgccggacccgtcgcgcccggccgccgcgccgtcgtc
gacctcgacgcgatccgccacaacgtccgcacgctcgcggcgctcgccgcccccgcccgc
acgatggtcgccgtgaaggccgacgcctacggccacggcgcgctccaggtcgcgcgcgcc
gccctcgaggccggcgccgagagcctcgccgtgctcgacgtcgcatccgccgtcgagctc
cgccgggccggcatcaccgcccggctcctggcctggctgcacagcgtcgacaccgacttc
cgcgtcgcggtggagaacggcatcgacctcggcgtctcggccctctgggagctggagcgc
atcgcggccgccgggcgcgccacggggatgcgcgcccgcgtgcacctcaaggccgacacc
ggactcagccgcaacggcgccacgccggagctgtggccggatctcgtgcgggccgcggtc
gccgccgacgccgcgggcgagctgacgctgcacgcgctgtggtcgcacctggccgacgcc
tcgcccgaggacgacgacgccgcgctcgcccgcttccacgaggcggtgcgcgtggccgag
gagctgggcgcgcgacccgtggagaagcacctggccgcgagctccgcggggatccgcctg
cccgccgcccgcttcgacatggtgcgcttcggcatcgcggtctacggcatctcgccgttc
gactaccgctccggccgcgacctcggcctgatccccgcgatgacgctggaagccgacgtc
gtctccgtcaagcgcgtcgaggccggacacggcgtctcctacggcctggaccaccgcacc
gcggggccgtcgacgctcgcgctcgtgccgctcggctacgccgacgggatcccgcgcatc
gccgccccgctcgcctccgtgctcctgaacggccgccgcttcccgatcgccggccgcatc
gccatggaccagctcgtgctcgacgtcggcgacctgcccgtcgaggtcggcgacaccgcc
gtgatcctcggccccggcgaccgcggcgagcccacggccgaggagtgggccggctgggcc
gagaccatcggcgacgagatcgtgacccgggtggggccgcgcgtcgaccgcgtgcacctg
cacgagcgcccggacgcggaggacgtcgacgccgaggacgccgccgccgaggtcctctcc
gacgagctcgtgcccgtcgccagcaccgacgacatggaggagctcggccgcgccctcgcg
cgcgagctgggcgcgggcgatctcgtcgtcctgtccggcccgctcggcgcgggcaagacc
acgctcacccgcgggctcggcgcgggactcggcgtccgcggtcccgtcacgagccccacc
ttcgtgctcgcgcgcacgcacccgagcctcgtcgacggcccgccgctcgtgcacgtggac
gcctaccgcctggccgacgcccgcgagctcgacgacctcgacatcgacttcgcgcgctcc
gtcgtggtggtcgagtggggcgacggcaagctcgacggcatcgccgaggagtggtgggac
ctgcggatcgcgcggcccacgggcgcgggcgtcgcggatcccgacgcggccggccacgcc
gccgccgacgccgacgcggatgccgccgccgacgcggacccggacgccgcccccgaggag
ccccgcaccgtccgcatccggcggctccgcgcgcggacccgcgcctag
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