Cynoglossus semilaevis (tongue sole): 103376707
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Entry
103376707 CDS
T04866
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X2
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04010
MAPK signaling pathway
csem04020
Calcium signaling pathway
csem04144
Endocytosis
csem04510
Focal adhesion
csem04540
Gap junction
csem04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103376707 (pdgfra)
04020 Calcium signaling pathway
103376707 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103376707 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
103376707 (pdgfra)
04540 Gap junction
103376707 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
103376707 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csem01001
]
103376707 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
csem04090
]
103376707 (pdgfra)
Enzymes [BR:
csem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
103376707 (pdgfra)
Protein kinases [BR:
csem01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
103376707 (pdgfra)
CD molecules [BR:
csem04090
]
Proteins
103376707 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
I-set
Ig_3
Pkinase
ig
Ig_2
V-set
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
C2-set_2
Kinase-like
Motif
Other DBs
NCBI-GeneID:
103376707
NCBI-ProteinID:
XP_008305410
LinkDB
All DBs
Position
2:16484118..16510338
Genome browser
AA seq
1474 aa
AA seq
DB search
MDGVKMFVIFGGIMMLLVSVSCELSPPTIEATEEEFILKLNSMFNISCSGKSKRRVVWAE
PLPENTFVYPGYYTATLFIDNATVENTGYYMCVYETQEGQLESEPEEDNEAGIYVFVPDP
TAPFVPETPENLVVPMDLSGVPISCRVSDPYLDVILRSVPSEEEMHAYYDSRMGFFGTLS
PGQYQCETSVNNQVARSAIYTVNAEAPEEMEDFSVEVKASDENVRVGQPFFIICMAPTGP
TFQQQWLHPKKQAMYTDQVKQTLPDHVVYTLSVSQASSQDSGVYECSVTNTVNGEVRVNS
VAINVFEENSFVSLHHSGIFEVEYVSLLQETEFTVFIDASPPPKVMWLKDGKELPANYFI
DTQTVPFQGNRYQSTLTLRQPLEKDNGNYTVVAHSGSHTAQFSFNIKVKASTSAFFPPSS
APVLLPQTDELIVTLHTPFTLSCRGEAKLAWDTPQDVREQTQEDNSGLFVSSIIVDSATA
IHTGHYICFYNSNTTEEIGETSIYIYVPDPDVPFVPSLVPFSKHILSDHEEMEIQCRVSD
PSANVTLINVDTQQPVPSVYDSKRGALGIFTVGTYMCKALINGEEHYSEEYIVHGWTGGA
GLHVELTAKRTALLVGEAITITCLARGSEILEDHWKYPGKLASRGVKTVRENKRNHEILY
TLTIAQATTKDSGIYSCSITDVISNESQTKELVIRVFAGEFMSIKPLFKEYESAQLDEVR
EFRAEITSFPTAHVTWLKGGIPLSNVTAEISTSLRQLSETSYLSTLTLIRAKEEDSGNYT
MRVENGNQSQDTGLTLEVKVPAVIMELVDIHHGSATGQSVVCISRGQPTPVVEWFICKNI
KQCANDSSLWVPLTINSTKITVDSHVDQDNNLESQVMFGHLENTVAVRCLARNEMAAVSR
EIKLVSNGPQPELTVAAAVLVLLVIVIISLIVLVVIWKQKPRYEIRWRVIESVSPDGHEY
IYVDPMQLPYDSRWEFPRDRLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPT
ARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNREN
FLSLNPEKNKKELDIFGINPADESSRSYVILSFEQTKGDYMDMKQADNTQYVPMLEMSNA
SKYSDIQTSDYDHPPSQKGSNEGEMDILLSEDMNEGLTTTDLLSFTYQVARGMEFLASKN
CVHRDLAARNVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYT
TLSDVWSYGILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMSKPEHAPHDVYEMMMKCW
NSEPEKRPSFLGLSETVATLLPSSYKKHYERINCEFLKSDHPAVTRVCVENDDAYIGISY
KNQGKLKDRESGFDEQRLSSDSGYIIPLPDLDPISDDEYGKRNRHSSQTSEESAIETGSS
SSTFAKREGETLEDITLLDEMCLDCSDLAEDSFL
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggatggggtgaagatgtttgtcatctttgggggcataatgatgctgctggtttcagtt
tcttgcgaactgtcaccaccaacaattgaggccactgaggaggaattcatcctgaagctc
aactctatgttcaacataagctgctcagggaaaagtaaaagaagggtggtttgggctgaa
cctctaccagaaaacacttttgtttatccaggatactacacagcaacactcttcatcgac
aatgccacagtagaaaacactggctactacatgtgtgtgtatgaaacacaagagggacaa
ctggagagtgagccggaagaggacaacgaggcaggaatatacgtctttgtcccagatccc
acagccccatttgttcccgagacccctgagaacttggtggtccccatggacctatctggt
gtccccatctcctgccgtgtctctgacccttaccttgatgtcatcctgaggagcgtcccc
agtgaggaggagatgcacgcttactacgacagcaggatgggctttttcgggaccctttca
cctggacagtaccagtgtgagaccagtgtaaacaaccaggttgccagaagtgccatttat
acggtgaatgccgaagctccagaagagatggaggattttagtgtggaagtaaaagccagc
gacgaaaatgtgagagtcgggcaaccgttcttcatcatctgcatggctcccactgggcca
acctttcagcagcagtggctccatcctaaaaaacaggctatgtatacggaccaggtaaaa
cagactctccccgaccacgtcgtctatactctcagcgtctcgcaggcctcttctcaggac
agtggcgtctacgagtgctcggttactaacacagtaaatggcgaggtcagagtcaacagt
gtcgccatcaatgtctttgaggagaattcctttgtgtcactgcaccacagtgggattttt
gaagtggagtatgtcagccttctacaggagactgaattcactgttttcatcgatgcctcc
cctcctcccaaggtgatgtggctgaaggatggcaaagaactaccagccaactacttcatc
gacacccagactgttccatttcaggggaatcgatatcaaagcaccctaacgttacggcag
cctcttgagaaagacaatgggaattacactgttgtagcccacagtggctcccacaccgct
cagttctcatttaatatcaaagtcaaagcctccacttcagccttcttcccaccatcctct
gctccggtgctgctgccacagaccgatgagttgatcgtgaccctacacactcccttcacc
ctaagctgcagaggagaggccaaactggcttgggacacgccacaagatgtgcgtgaacaa
acacaggaggacaacagtggcctgtttgtctcgtccatcattgtggacagtgctactgca
atacacactggccactacatctgcttttacaacagcaacaccacggaggagattggagaa
accagcatctacatttatgtaccagatccagatgttccctttgtgccatcactggtgcct
ttcagcaaacacatcctgtctgaccatgaggaaatggagatccagtgtcgtgtgtctgat
cccagtgccaacgtgacgctcatcaatgttgacacgcagcagcccgtgcctagcgtttac
gacagtaagagaggagctctgggcatattcactgtgggcacctacatgtgtaaagccctc
ataaatggagaagaacactacagtgaggaatacattgtccacggctggacaggtggtgct
gggctgcacgttgagctgacagccaagaggaccgctctgctggtgggagaagccatcacc
atcacctgtctggctcgtggttctgaaatcctggaagaccactggaaataccccggcaaa
ctggccagtcgtggagtcaaaactgtccgtgagaacaaaaggaaccacgagattctctac
actttgacaattgcacaggctacaaccaaagacagcggcatctactcatgttccatcact
gatgtcatcagtaacgagagccagacaaaggaactggttattagagtttttgcaggtgaa
tttatgtccatcaagccgctgtttaaagaatatgaatcagcacagctggatgaggtgcgg
gagttcagagcagaaatcacttccttcccaactgctcatgtcacatggctgaaaggtggg
atccctctcagcaacgtgacggcggagatctccaccagcctgcggcagctcagtgagacc
agctacttgagtaccctcaccctgatccgggccaaagaagaggacagtgggaattatacg
atgagagtggagaacggaaaccagagtcaggacactggcctaaccctggaggtcaaagta
ccagcggtcatcatggagctggtggacatccaccacggttcagccacaggccagtctgtg
gtgtgtatttctagggggcagcccacccctgtggtggagtggttcatctgcaagaacatc
aaacaatgtgccaatgactcgtccctgtgggtgcccctcactatcaattcaacaaaaatc
acagtggactcccatgttgaccaggacaacaacctggagagccaggtcatgtttggtcat
ctggagaacaccgtggcggtgcgctgcctggccaggaacgaaatggccgctgtcagcagg
gagatcaaactggtctcaaatggccctcaaccagagctgactgtagctgctgctgtgctg
gtgctactggttattgtcatcatctcactcattgtcttggttgttatctggaaacagaaa
ccaagatacgaaatccgctggagggtcatcgagtcggtcagcccagatggtcatgagtac
atctatgtggatccaatgcaacttccttatgattccagatgggaatttccccgtgacaga
cttgtgctcggtcgtatcctgggctctggagcctttgggaaggtggtagagggcacggcc
tacggactcagccgctcccagcctgtcatgaaggtggcggtcaaaatgttaaaacctaca
gcacgctccagtgagaaacaagctctgatgtcggagctgaagattatgactcatctcggc
cctcacctgaatatcgttaaccttctgggagcttgcacgaaatcaggccctatctacatc
atcacagagtactgcttctacggggacttggtcaactacctgcacaaaaacagggagaac
ttcctgagcctgaacccagagaagaacaaaaaagaactggacatctttggaatcaaccct
gccgacgagagcagcaggagttatgtgatcctgtcgttcgagcaaaccaaaggagattac
atggacatgaaacaagctgacaacacccagtatgtgcccatgctggagatgagcaacgct
tcaaaatactctgacatccagacatcggactacgaccacccaccctcccagaaaggctca
aatgaaggtgaaatggacatcctgctgtcagaggacatgaacgagggcctcaccaccacg
gacctgctcagcttcacctaccaagtggccagaggcatggagttcttagcctccaagaac
tgtgtgcaccgggacctcgcagccaggaatgtacttctctctcagggcaaaatagtcaag
atctgtgactttggactggccagagacatcatgcatgacaacaactatgtctccaaagga
agcaccttcctgccagtgaagtggatggcccccgagagtatctttgacaatctctacaca
actctgagtgatgtctggtcttatggcatcctcctctgggagatcttctctctgggtgga
accccgtacccaggaatggtggtggattccagcttctacaacaagatcaagagtggctac
cggatgtccaagcctgaacatgctcctcatgacgtgtatgaaatgatgatgaagtgctgg
aacagcgagccagagaagaggccatcttttctgggtttgagtgaaactgttgcaaccttg
cttccctccagctacaaaaagcattatgagaggattaactgcgagttcctgaagagcgac
caccctgctgtaactcgtgtgtgtgtggagaacgacgacgcctacataggcatttcctac
aagaaccagggcaagctaaaggaccgggaaagtgggtttgatgagcagcgtctgagctct
gacagcggctacatcattcctctgcccgacctggaccccatatctgatgatgaatatgga
aaaagaaacagacacagctctcagacatcggaggagagtgccatcgagactggttccagc
agctcaaccttcgctaagcgtgaaggggagaccttggaggacattacactgctggatgag
atgtgtctggactgtagtgatctggcagaggacagctttctgtga
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