Cynoglossus semilaevis (tongue sole): 103376825
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Entry
103376825 CDS
T04866
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X2
KO
K16474
intraflagellar transport protein 88
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csem03037
]
103376825
Cilium and associated proteins [BR:
csem03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
103376825
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_7
TPR_6
TPR_11
TPR_19
TPR_14
TPR_17
TPR_16
TPR_10
ANAPC3
DUF2225
TPR_9
TPR_15
ARM_TT21_2nd
ARM_TT21_4th
TPR_MalT
ARM_TT21_N
TPR_CcmH_CycH
Coatomer_E
TPR-S
DUF1347
ARM_TT21_C
COP9_hel_rpt
RPN6_N
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
103376825
NCBI-ProteinID:
XP_008305576
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Position
2:19983095..19988018
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AA seq
583 aa
AA seq
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MENYKITASFPSTTMGTRTSSFSFGSQFCITPPKSRPNTVVGYFSTARPMNPATGYRSSL
SGGSTLDLLSQSRSRSLSSELKTQTTIDEKIVILEKRVRDLIEKSCLAKSAGDLQTAFKR
AKEAGRSERALVSLQEKAGRMNIVNIGLTYSVLLNLANQYESNEMYTEALSSYQIIVKNK
KFTHGGFVRVNMGNIYFKLKNYTKALKFYRMALDTISNEFVEIRMKIMQNIGLVFAHTGQ
YSDAIESFEHIMTERPNIKTGFNLILCYYAIGDTERMKTGFQNLTSVTLDMNDGQKYMSA
PDDFSTSVIFEGAKNDKLYQMGGNLKALANKCIVISVKLIAPVIETSLVAGLDWCLDILK
TTQHADTAHDLEITKAVICLGQRNFNLAEVVETLSTLEKKESSRKGAAATNLSSLYFLEK
DYEKADRYSDFAMDTDSTNPAVLVNKGNTTFIKQDYKKAAEFYREALKSDSSSTEALYNL
GLSYKKMKCLEDALECFLKLHAILRNSSQVMYQLANLYELLGNPKQAIKWLTQVISLMPT
DPKALAKVGELYECEGDESQALQYYYESFRSAAQVLHLGRGFY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggagaattacaaaataactgcttcttttccaagcaccaccatgggaacccggacatca
agtttttcattcggttctcagttctgtataaccccgccaaagagcagacccaatactgtt
gtgggatattttagcactgcacgtccaatgaatcctgccactggctacaggtcctctctg
tccggtggatcaaccctggatcttctaagccagtccagaagccgttctctttcatccgaa
ttaaaaactcagacaacaattgatgagaagatagttatccttgagaaacgagtgagagac
cttattgaaaaaagctgtttggcaaagagcgccggagatttgcagacggcttttaaaaga
gccaaagaggcaggaagaagtgagagagcgttggtgagtcttcaagaaaaagcaggcagg
atgaacattgttaatataggactcacctactcagttttgcttaaccttgccaaccagtat
gagagcaatgaaatgtacacggaggccctaagcagttaccagatcattgtaaagaacaag
aaatttactcacggaggatttgttagagtaaacatgggcaatatttattttaaactgaaa
aactacaccaaagccctaaagttttacagaatggcactggacacgatttcaaatgaattc
gtggaaataaggatgaagataatgcaaaatattggcctagtctttgctcacacaggccaa
tactccgatgcaatagaatcttttgaacacattatgaccgagagacccaacatcaagacg
ggcttcaaccttatcctgtgctactatgctattggtgatacagagagaatgaagactggc
tttcagaatctcacatcggtcactcttgacatgaacgatggacaaaagtacatgtcagct
cctgatgacttcagtacaagtgtaatctttgaaggagccaagaatgacaagctttaccag
atgggaggaaatcttaaagcacttgctaataagtgcattgtaatctcagtgaagctcatt
gctccagtcattgaaacctctcttgttgcaggtttagactggtgtttggacattttgaag
actactcagcatgctgacacagctcatgatctagaaattaccaaagccgtcatctgtctt
ggacaaaggaacttcaatcttgctgaggtggttgaaaccctaagtacattagaaaagaaa
gagagcagcaggaagggtgcggcagccaccaatttatcctcactttactttctggagaag
gattatgaaaaagcagatcgatattccgattttgccatggacactgacagcaccaaccca
gcagtgcttgtcaacaagggcaacacgacgttcatcaagcaggattacaaaaaggccgca
gaattctacagggaagcactgaagagtgattcttctagtaccgaggccctgtacaaccta
gggctatcctacaagaaaatgaaatgtcttgaggacgccctggaatgcttcttgaagctt
catgccattctgcggaatagcagccaagttatgtaccagctggccaatctctacgaactt
cttggtaatcctaaacaggcaataaagtggctaacgcaggtcatcagcctgatgcccact
gaccccaaggccctagctaaagtgggcgagctgtacgaatgtgagggggacgaatctcag
gctttgcagtactactacgagtccttcaggtctgctgcccaagtccttcatcttggccgt
ggcttttactga
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