Cynoglossus semilaevis (tongue sole): 103377003
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Entry
103377003 CDS
T04866
Symbol
stau2
Name
(RefSeq) LOW QUALITY PROTEIN: double-stranded RNA-binding protein Staufen homolog 2
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csem01009
]
103377003 (stau2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103377003 (stau2)
Protein phosphatases and associated proteins [BR:
csem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103377003 (stau2)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
103377003 (stau2)
mRNA cycle factors
Stress granule specific factors
103377003 (stau2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Dicer_dsRBD
COA2
Motif
Other DBs
NCBI-GeneID:
103377003
NCBI-ProteinID:
XP_008305832
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Position
3:complement(4387577..4450290)
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AA seq
668 aa
AA seq
DB search
MAQVKVQTSASLAGPGLSTGVPPMAMASTGSLGLQPSVNGTGTAPTPACPAPAAGYGDAP
VSSTSPGPPQENMANPKEKTPMCLVNELARFNRTQPQYKLLNERGPAHAKIFTVQLTLGE
QVWEAEGTSIKKAQHSTAAKALTESVLPRPAPRSPKVDVNSNPGSITPTVELNGLAMKRG
EPAIYRPLDPKPMPNYRANYNFRGMFNQRYHYPVPKIFYVQLSVGSHEFIGEGRTRQAAR
HNAATKALQALRNEPIPERPPQSPEEKVETEDGTDANKSEISLVYEIALKRNLSVNFEVL
KESGPPHMKSFLTRVTVGEFSAEGEGNSKKLSKKRAALSILQDLKKLPXPAVEKPKPHYK
KRTKTILKTGPDYGQGMNPISRLAQIQQAKKEKEPEYLLLSERGMPRRREFIMQVKVNNE
VATGTGPNKKVAKRNAAEAMLLQLGYKASTVPQNPTEMDNKGWNGQKASFTEATSNTQKG
LLHLSPDVYQEMEASRKQGGSVSGPGGSSANSANYTAPKDMGPCSAPLPPGHTQYYSGSP
SSTSPTATGARELLINGQSVSSETSLPVKGKSPPLACGVSVQPAQQLDYLARIQGFQVQY
SDAQSGKDYVTYLTLSPVQMTFHGTGSTLQASHDQAALSALKQLSEQGLDPVEGPIKTSE
PCGREDGH
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtgaaagtgcagacctcagcatccctggctggtcctggcctctccactgga
gttcccccgatggccatggccagcacaggatccctgggtctgcagccctccgtcaatggc
acaggcacggcccccacacccgcctgccctgctcctgcagccggatatggggacgcccct
gtgtcctctacatcgccaggtccaccccaggagaacatggcaaaccctaaagagaaaact
ccgatgtgtttggtgaatgagttagcccgttttaatagaacccaaccacagtacaagctc
cttaatgagagaggccctgcacatgccaagatcttcactgtgcagctgactcttggggag
caagtgtgggaggctgagggtaccagcatcaaaaaggctcagcactctacagccgccaaa
gcactgactgagagtgtccttcctcggccagcccctcgctctcctaaagtggacgtcaac
agtaacccaggcagcataacacccacagtggagctcaatggacttgccatgaagagagga
gaaccagctatatacaggcctttggatcctaagcccatgcccaactatagagccaactac
aactttagagggatgttcaaccaaaggtaccattatcctgttcctaagatcttttatgtg
cagctgtctgtggggagtcatgagttcatcggagagggtcgaactcgccaggcagcaaga
cacaacgctgccacaaaggccctccaagctttgcgcaatgaaccaattccagaacgacca
ccacagagtccagaagagaaagtggagaccgaggatggaactgatgccaacaagtcggag
atcagccttgtctacgaaatagccctaaaaagaaacctgtctgtcaattttgaggttctg
aaggagagcggcccccctcacatgaaaagcttcctgactcgtgtcaccgtgggagagttc
tcagctgagggcgagggcaacagcaagaaactgtccaaaaagcgtgcggctctgtccatc
ctccaggacctgaagaagctgcccnttccggctgttgagaaacccaagccacactacaag
aaacgcaccaagaccatcctcaagacgggaccagactatggccagggcatgaacccaatc
agccgcctagcccaaatccaacaagccaagaaagagaaagagcctgagtacctgctgctg
tctgagagaggaatgccccgacgtcgggagtttatcatgcaggtgaaggtgaacaatgag
gttgccacgggaacaggaccgaacaagaaagtggccaagcggaacgcagccgaggcgatg
ttgctgcagctgggatacaaggcctccacagttcctcagaatcccacagagatggacaac
aaaggctggaatggacaaaaggcgtcctttactgaagcaacaagtaacacccagaagggt
ttgctccacctcagccctgatgtctaccaggagatggaagccagcaggaagcaaggagga
agtgtttcaggtcctggaggcagcagtgccaactcggccaactacactgcacccaaagac
atgggaccctgctctgcccctctgcccccaggacacactcaatactacagcggctcaccc
tcctcaaccagcccaactgccacaggagccagagagctgctgattaatggccaatcagtt
tcatctgagacctccctaccggtaaaagggaagagtccacctctggcctgtggtgtgtca
gtgcagcctgcacagcagttggactacctggctcgcatccagggcttccaggtgcagtac
agtgatgcacaaagtggcaaggattatgtgacctatctgaccctctcccctgtgcaaatg
actttccatggcactgggagcaccctccaagccagccatgaccaggctgctctaagtgcc
ttgaaacagctgtcggagcagggactggacccggtcgaaggccccatcaagaccagtgaa
ccctgtgggcgggaggacggacattaa
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