Cynoglossus semilaevis (tongue sole): 103377016
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Entry
103377016 CDS
T04866
Symbol
trpa1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csem04040
]
103377016 (trpa1)
Ion channels [BR:
csem04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103377016 (trpa1)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
103377016
NCBI-ProteinID:
XP_016886955
UniProt:
A0A3P8VJL2
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Position
3:complement(4230955..4321890)
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AA seq
1131 aa
AA seq
DB search
MNFNRELTRRNSCYTYVVEEEDPTLASLNVFELAEKGDLALLQSLARKNPEVLRERDECG
AGLLHHAAAGGHATLIQFITTVLDSQAKYIPAIDHHVQSITELNSCDDQGSVALHWAVEW
NKEPSLRALMDLGANPNILNKALMSPLHLAVSHGHDNLVELLLSYSSTDSNLEGDLGNTP
VILACSINNCQALNILLKHGAMLCHQNKLGHFPIHAAAFAGAKKAMEVILKAGEEAGHSL
TGHINYIDKSRSSPLHLAVRGGNLETIRLCIATGAKIDQQQNDKSTPLHLACTQGATEVV
KLMLSSVDQVEDIINLTDGARQTPLHRATIFDHVELAENLISLGADLSSTDCKGYTPLLL
AASCGAWRTLSLLLSKGANPNVRDLSGCNFLHLVILQPKGLKNLPEEVFQNNSVKDLLSC
EDNDGCTPLHYACRLGIHESVKNMLGLSGDIGLACKSKDKKSVLHFAAQYGRINTCHRLL
ESITDSRLLNEGDERGLTPLHLASRAGHTKVVQLLLRKGALFHSDYRGWTCLHHAASEGY
TQTMDIVLSANPKLMDKTDEDGNTALHIGAKEGHAAAVKLMLARGAMIVLNKNETSFLHE
AVQNGRKDVVNAVIDSDRCPEAVACFKGDSHQKCPILDMIEFLPESFKYLLDHCVRESED
DHNSPNYHIEYSFRWLQPPITLKRENGKNLFKPLAALNAMVKYNRLELLNHPVCKKYLHM
KWVAYGIKAHIMNMLMYMLGVVPLTHLIVTLRPSFNTTETGEHVVHMVPISFKEQSLSLS
LSIILVIVMNIFCIAKEMVQISQQRWTYFRDSTNSSDWFTAVTSLLFIIPSILNVEGSLH
WQAGALAVLNAWVGFLLYLQRFEGVGIYIVMFGEILRTLLRIVFMFMYLMLAFALAFHAL
MLNQREFDSVPLSLAQTFVMMVGELNYQSNFLDPYLRNQLPFGPLTYYVFAHFVMLMPIL
LVNLMIGLAVGDIAEVQRNAALKRIAMQIDLHTALEDKLPYWFMKRVDKYSTVVYPNRKC
TRSFISQWILGVEKKTEIWGRVKAKSQACTMLENELKKQKSRMKEMSSMLEKQHSLLKLI
IQKMEITSEAEEYDGPVNLKGNSWKSLVQPQPRSASKWFPLIKAIGSRRKC
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaacagagagctgactcgtcggaacagctgttacacatacgtggttgaagaa
gaagatccaaccctggccagcctgaatgtgtttgagttggctgagaagggtgacctggct
ctgctgcagagcctggccaggaagaaccctgaggtccttagagagagagatgaatgtgga
gcgggcctccttcatcacgctgctgcggggggccacgccactctcatccaattcatcacc
accgtcctcgactcacaggctaagtacattccagccattgatcatcatgtgcagtccatc
acagagctgaacagctgtgatgatcagggaagcgtggcccttcactgggcggtggagtgg
aacaaggaaccgagcctcagggctcttatggacctaggggccaaccccaacattctgaac
aaggccctcatgtctcccctacacctggctgtcagccatggacacgataacctggtggag
ctgttactgtcctacagttccacagacagtaatctggagggagacctggggaacactcct
gtgatcctggcctgctccatcaacaactgtcaggctctcaatatattgctgaagcacgga
gcgatgctctgccatcaaaacaagctgggccatttccccatccacgctgctgcgttcgca
ggtgcaaagaaagccatggaggtgatcctgaaggccggagaggaggccggtcactcactc
actggacacattaactacatagataaatcaaggagcagccccctccacctggctgtccgc
ggagggaaccttgaaaccatccgcctttgcattgctacgggagccaaaattgaccaacaa
cagaatgacaagtccactcctttacacctggcctgcacccagggagccactgaagtagtc
aaactgatgctctcctccgtcgaccaagtggaagacatcatcaatctgactgacggagcg
cgtcagacccctctgcacagggctacaatatttgaccacgtggagctggcagagaacctc
atttctttgggtgccgatctgagcagcacagactgtaagggatacacaccgttgctgttg
gccgccagctgtggagcatggagaactttgtctctgttgctgtccaaaggggcaaatcca
aatgtgagagacctgagtggctgtaacttccttcacctggtcatcctgcagcccaaaggt
ctgaagaacctcccagaagaagtttttcagaataacagtgtcaaagacctgctgagctgt
gaggacaacgacggctgcaccccgctccactacgcctgcagactgggaatccacgagtcg
gtgaagaacatgcttggtctctcgggggacatcggccttgcatgcaagtccaaggacaag
aagtctgtcttgcactttgcagctcagtatggacgaatcaacacatgccacaggctgctg
gagagcatcacagattctcgcctgctgaatgagggtgatgagcgaggtctgacaccactt
catttggcctccagggcgggacataccaaggtggtgcagttgctgctgcgcaaaggagcg
ctctttcacagtgattatagaggctggacttgtctgcaccacgctgcatcagagggatac
acacaaactatggacattgtcctgtcagccaatcccaagctaatggataaaacagacgag
gacgggaacactgcactccacatcggagcaaaggagggacatgctgctgcagtcaagcta
atgttggcccgcggagcaatgattgtcttaaacaagaatgaaacctcatttctccacgag
gccgtgcagaatgggagaaaagatgtggtcaacgctgtcattgacagtgataggtgtccc
gaggctgtggcttgtttcaaaggggattcacatcagaaatgtcccattttggacatgatt
gagtttcttccagagagcttcaagtacttgctggaccactgtgttagggagtctgaagat
gaccacaacagtccaaactaccatattgaatatagtttcagatggctccaacctcctatt
acactgaagagggaaaatggcaaaaatctgttcaagccactggctgcactcaatgcgatg
gtaaagtacaaccggttggaactgctcaaccacccggtctgcaaaaagtatctgcacatg
aaatgggttgcatatggaataaaagctcacataatgaacatgttgatgtacatgttaggc
gttgtacccctgacccacctgatcgtgactctgaggccctcgtttaacaccacagaaaca
ggggagcacgttgtccacatggtgcccatttctttcaaagagcaaagcctgtccctgtcc
ctcagcataatcctggtcattgtcatgaacatcttctgcatcgcaaaggaaatggtgcag
atatcacagcagcgctggacttactttagagattccaccaactcctctgactggttcaca
gctgtcacttctctccttttcatcatcccttccatattgaatgtagaaggatccttacac
tggcaggcaggggcgttggcagttctgaacgcatgggttggatttctcctttaccttcag
aggtttgagggtgttggcatctatattgtgatgtttggggagatcctacgtacactgtta
cgcatcgtgttcatgttcatgtacctcatgttagcctttgcactggccttccatgctttg
atgcttaaccagagagagtttgacagcgtgcctctgtcactggcgcagacctttgtgatg
atggttggtgaactcaactaccagagcaactttctggacccttatctacgcaaccagctg
ccatttggtccactgacctactatgtttttgctcattttgtgatgctgatgccaatactg
ctggtgaacctgatgattggtttagcagttggagacatcgctgaagtgcaaagaaatgct
gcgttgaaaagaatagccatgcagattgatcttcacacagccctggaggataagctccct
tattggttcatgaaacgagttgacaaatactccaccgtggtttaccccaaccgcaagtgc
acaaggagcttcatatcgcaatggattcttggtgttgagaaaaagacggaaatctggggt
cgtgtaaaagccaaatcacaggcctgcactatgttggagaatgagctgaagaagcaaaag
tccaggatgaaggagatgtccagcatgctggagaagcagcacagcctgctgaagctcatc
atccagaagatggagatcacctcagaggctgaggagtacgacggtccggtgaacctcaag
ggcaactcctggaagagtctggttcaaccgcagccgagaagtgcatccaaatggttccca
ctgataaaggccatagggtccaggagaaaatgttga
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