Cynoglossus semilaevis (tongue sole): 103377162
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Entry
103377162 CDS
T04866
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csem04040
]
103377162 (trpc1)
Ion channels [BR:
csem04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103377162 (trpc1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
103377162
NCBI-ProteinID:
XP_008306051
UniProt:
A0A3P8WB30
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Position
3:9630527..9644345
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AA seq
795 aa
AA seq
DB search
MHISVCPYSLTVIMAALYQGTDASSPDKFLALKDVREVKEETTLDDKLFLLACEKGDYYM
VKKLLEENKHGELNVNCVDVLGRDAVTITIENENLDILQLLLDHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVIMAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHVNKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMATVLSVAMLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYMTFLLLLNLYSLVYNEGKKNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKIVAHSKFKN
VEDTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGGNEKEKNSPPRDCEGIFCPQQSNSAFHSFMGTCYALFWYI
FSLAHVALFVTRINLTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHEDK
EWKFARAKLWLSYFDDKCTLPPPLNILPSPKTVCYFVTSMSKWICSHTSKGRVKRQNSLK
EWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLHDLRQDLSKFRNEMRDL
LGFRTSKYAMFYPRS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgtctgtccctactccctgaccgtcatcatggcagctctgtaccagggc
acggacgcttcctctccggataaatttctggccttgaaggatgtgagggaggtgaaggag
gagactacgctggatgacaagctcttcctgctggcatgcgagaaaggtgactactacatg
gtgaagaaactcttggaggagaacaaacacggcgaactcaacgtcaactgcgtggacgtg
ctgggccgagacgccgtgaccatcaccatcgagaacgagaatcttgacatcctgcagctt
ctcctggatcatggctgtcaggccacagatgccttgttggtggctatagactcagaggtg
gttggagccgtggacatcctcctcaaccacaggcccaggagatcgtccaagccctcgatt
gctaaactgatgcagcgtattcagaacccagagtactccaccaccatggacgtggcaccg
gtcatcatggcagcccacaggaacaactatgagatcctgaccatgctgctgaaacaggac
atctctctgccgcggcctcacgccgtaggctgtgagtgcacgctgtgcaacgctaagaac
aagaaggacagccttcgacactccaggttccgcctggacatctaccggtgtctggccagt
ccctcactcatcatgctgactgaggaggatcccatactcagagcctttgagctgagtgca
gacctgaaggagctcagtctggtggaggtggagttcaggaatgattacgaggagctggcg
aagcagtgtaagatgttcgccaaggacctgctggcacaggctcgaaactcacgagagctg
gaggttattttgaatcatacctccagcgaagatcacgtgaacaagagaggtctgctggag
gaacgcatgaacctcagccgcctcaaactggccatcaagtacaaccagaaggagtttgtg
gctcagtccaactgtcagcagtttctcaacaccgtgtggttcggagaaacggccagttac
aggaggaaacacacctgtctgaagatggccactgttctgagcgtagccatgctctggccg
ctgctctccgtctgctaccttctggttccacgctcacgtgtgggtcagatcatccacacg
cccttcgtcaagttcatcatccacagcgcctcctacatgaccttcctgctgctgctcaac
ctctactccctggtctacaacgagggcaagaagaacaccatgggccccgcgctggagatg
atcgactacctgctcatcctctggatcatagggatggtgtggtcagacgtaaaacgcctg
tggtatgaaggcctggaggacttcctggaagagtccaggaaccagctgagctttgtgatg
aattccctatatctcgcaaccttcgctctcaagatagttgctcacagcaagtttaagaac
gtggaggacactgagaggaaaaactgggatgccttccatcccatcctggtggccgagggt
ctgtttgccttcgctaacgttctgagttacctgcgactcttctttatgtacaccaccagc
tccatcctcgggccgctgcagatctccatgggtcagatgctgcaggagtttgggaagttc
ctcggcctcttcctgctggtcctgttctccttcaccattggactcactcagctttatgga
gggaatgagaaggagaagaactcaccacccagggactgcgagggcatcttctgcccacag
cagagcaacagtgcattccacagcttcatgggaacctgctacgccctcttctggtacatc
ttctccctagcgcacgtcgcactgttcgtcacccgcatcaacctaacggaggagctgcgt
tcatttgtcggcgccatgatcatcggcacctacaacatcgtggtggtcattgtgctgacc
aagctgctggtggcaatgctccataaaagcttcagacaaattgccaatcacgaggacaag
gagtggaagtttgctcgagccaaactgtggctcagttactttgacgacaagtgcactctg
ccaccacctctgaacatcctgccctccccgaagaccgtgtgctactttgtgaccagtatg
agcaagtggatctgctcacacacttcgaagggcagagtgaagagacagaacagtctgaag
gaatggaaaaacctgaaacagaagcgtgacgagaactaccagaagatcatgtgttgtctg
gttcaccgctacttgacgtccacgcgccagaagatgcagagcacagaccaggccaccgtg
gaaaacctccacgacctacgccaggacctctccaagtttcgcaacgagatgagggacctg
ttgggattccggacgtccaaatacgccatgttctacccgaggagctga
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