Cynoglossus semilaevis (tongue sole): 103377530
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Entry
103377530 CDS
T04866
Symbol
shh
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
103377530 (shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csem01002
]
103377530 (shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csem00536
]
103377530 (shh)
Peptidases and inhibitors [BR:
csem01002
]
Cysteine peptidases
Family C46: hedgehog family
103377530 (shh)
Glycosaminoglycan binding proteins [BR:
csem00536
]
Heparan sulfate / Heparin
Morphogens
103377530 (shh)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Intein_splicing
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
103377530
NCBI-ProteinID:
XP_008306592
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Position
3:15551778..15560429
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AA seq
435 aa
AA seq
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MVLWSTVASVALICLSLLSSGMGCGPGRGYGRRKHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPASSTLTLEDGTQRAVGELRPGDRVLAADPDGHLLYTDFIT
FIDQDSTTRRLFYVIETDSGQRITLTAAHLLFVGHNSSSSSSSSSSSSSSPSSSSSSSVV
DRRMSAVFASSVQPGQKVFVLDSVGQQLQPVTVRRIFTQEHQGSFAPVTAEGTVVVDRVL
ASCYAVIEDHRLAHWALAPVRAAHWVSTLLFSPQTAAGTRQEDGVHWYSKVLYQLGTWLL
DSQSIHPLGMSVSPS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggttctctggagcaccgtcgcctcggtcgctctcatctgcttgtccttgctgtcctcc
gggatgggctgtggaccgggcaggggctacggcaggaggaagcacccgaagaagctgaca
cctctggcgtacaagcagttcatccccaacgtggcggagaagaccctgggggccagcggc
agatacgaaggcaagatcacgagaaactcggagcgatttaaggagctgactcccaactac
aacactgacatcatcttcaaggatgaggagaacaccggtgccgacaggctcatgactcag
agatgcaaagacaagctgaattctctggccatctcggtgatgaaccagtggcccggggtc
aagctgcgggtcaccgaaggctgggacgaggacggacaccacttcgaggagtcgctgcac
tacgaaggccgcgccgtggacatcaccacgtccgacagggacaagagcaagtacggcact
ctgtccaggctggccgtggaggctgggtttgactgggtctactacgagtccaaagcccac
atccactgctccgtgaaagcagagaactccgtggcggcaaagtccggcggctgtttcccg
gcatcctccactctgaccctggaggacggaacccagagagcggtcggggagctgcggccc
ggggacagggttctggcggccgaccctgacggacacctgctctacacggacttcatcacc
ttcatcgaccaggactccaccaccaggaggctcttctacgtcatcgagaccgactcgggc
cagagaatcacgctgaccgccgcacacctgctcttcgtgggccacaactcttcttcttct
tcttcttcttcttcttcttcttcttcttctccttcttcttcttcttcttcttctgtggtg
gacagacggatgtcggcggtgttcgccagcagcgtccagcccggacagaaggtcttcgtg
ttggactccgtgggacagcagctccagcccgtcaccgtccgacggatttttacgcaggaa
caccagggctcgtttgcgccagtgaccgcggaggggaccgtggtggtggaccgggtcctg
gcgtcctgttacgcagtgatcgaagaccaccggctggcacactgggccctggccccggtc
agggccgcgcactgggtctccacgctgcttttcagccctcagactgcggctgggacccgg
caggaggacggggtccactggtactccaaggtcctttaccagttagggacatggctgttg
gacagtcagtccatccatccactgggcatgtcggtgtccccgagttga
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