Cynoglossus semilaevis (tongue sole): 103377651
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Entry
103377651 CDS
T04866
Symbol
cpsf3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103377651 (cpsf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103377651 (cpsf3)
03019 Messenger RNA biogenesis [BR:
csem03019
]
103377651 (cpsf3)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103377651 (cpsf3)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103377651 (cpsf3)
U7-dependent histone pre-mRNA processing factors
103377651 (cpsf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
103377651
NCBI-ProteinID:
XP_008306750
UniProt:
A0A3P8UQW6
LinkDB
All DBs
Position
1
Genome browser
AA seq
690 aa
AA seq
DB search
MATKRKVEVMVPAEESDQLIVRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVREVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPSVKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRE
GRCLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKAININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLQLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDQVHIEVHNPRNTEAVALNFRGEKLAKVMGCLADK
KCVQGERVSGILVKKNFNYHILSPSDLSLYTDLSMSTVKQTQAIPFTGPYSLLVCHLRNL
TGDVEEVEATEKNTLKLFKNIALTHEGGMVLLEWIANPLNDMYADAVTTVVLEVQSNPKA
QKVMEAQGEVMDADVFQSRLEVMLQDMFGEDCVDFVDRKNISLTVDGKTVLICLETRSVC
NAEEGAAEDDSFRETVELAVQRLDALNPVM
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaaacggaaagtagaagtgatggtgcctgctgaagagagcgaccagcttatt
gttcgcccgctgggcgctggtcaggaggtcggaagatcgtgcatcatcctggagtttaaa
ggcaggaaaataatgttggattgtggtattcaccctggcttggagggaatggacgccctg
ccttacatagatttaatcgacccagctgagattgacctgctgctcatcagccacttccat
ttggatcactgtggagccctgccctggttcctccaaaagaccagcttcaaaggcaggacg
ttcatgacccacgccacaaaagccatctaccgctggttgctgtcggactacgtcaaagtc
agcaacatttctgctgatgacatgctctacactgagacagacctggaggagagcatggac
aaaattgagactattaactttcacgaggtcagagaagttgccggaattaagttctggtgt
taccacgctggtcatgtgctgggagctgccatgttcatgatcgagatcgctggagtcaag
ctgctgtacacaggagacttctctcgacaggaggacagacatctgatggcagctgagatc
cccagtgtcaaacctgacatcttgatcattgagtcaacttacggcacacacatccatgaa
aagagggaagaacgtgaagctcggttctgcaacacagtccatgacattgtcaatagggag
ggtcgatgtttaatccccgtgtttgccctgggacgagctcaagagctgctgctcatcctg
gatgagtattggcagaaccacccggagctccacgatattcccatctactacgcatcatcc
ctggccaagaagtgcatggccgtgtaccagacctacgtcaacgcaatgaacgacaagatc
cgcaaggccataaacatcaacaacccttttgtcttcaaacacatcagcaacctgaagagt
atggatcattttgacgacatcggtcccagcgtggtgatggcgtctccaggtatgatgcag
agcggcctgtccagagagctgttcgagagctggtgcactgataagaggaacggtgtcatc
atcgctggatactgtgtggagggaaccctggccaagcacatcatgtccgagcccgaggag
atcaccaccatgtcgggacagaagctgcagctgaagatgtccgtggactacatctccttc
tcggctcacacagactaccaacaaaccagcgaattcatcagagcgctcaaaccaccgcac
gtgatcctggtccacggggaacagaacgaaatggcccgtctgaaggctgctctgatcaga
gagtacgaagataatgaccaggttcacatcgaagtccacaaccctcgcaacacagaagcc
gtggcgctcaacttcagaggagagaaactggccaaggtgatgggctgcctggctgataaa
aaatgtgttcagggtgagagggtgtcgggtatactggtgaagaagaacttcaactaccac
attctcagtccctctgacttgtccttgtacacagatctgtccatgagcacagtcaaacag
acacaggccattcccttcactggaccttactcactgctcgtctgccacctgaggaacctg
actggtgatgtggaagaggtggaagccacagagaaaaacacgttaaagctctttaaaaat
atcgctctgacacatgaaggtggcatggtgctgctggagtggatagcaaaccctctgaac
gacatgtacgctgatgctgtcaccactgtagtgctggaggtccagtccaaccccaaggct
cagaaagtcatggaggcacagggagaagttatggacgctgatgtcttccagtccagacta
gaagtcatgctgcaggacatgtttggagaagactgcgtggatttcgttgaccgtaaaaac
atctccctaacagtagatgggaagacagttctaatctgcctggaaaccaggtccgtttgc
aacgcagaggaaggcgccgcagaggacgactccttcagggagacggtggaactcgctgtg
cagcggctcgacgctctcaacccggtcatgtga
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