Cynoglossus semilaevis (tongue sole): 103377905
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Entry
103377905 CDS
T04866
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04137
Mitophagy - animal
csem04140
Autophagy - animal
csem04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103377905
04137 Mitophagy - animal
103377905
04148 Efferocytosis
103377905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csem03000
]
103377905
Transcription factors [BR:
csem03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103377905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_9
PAS_4
CENP-B_dimeris
Nop52
Motif
Other DBs
NCBI-GeneID:
103377905
NCBI-ProteinID:
XP_016887354
LinkDB
All DBs
Position
4:7843817..7856788
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AA seq
666 aa
AA seq
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METIEESTVVKRSSSEQRKLRSRDAARCRRSQETEVFYELARTLPLPRRVSTHLDKAAIM
RIALSVLRMQRLLRSAGETKKESAEDDMKQEQQQQQEEEEDEEEEDEMDVFYPQALAGFV
MVLTEEGDMIFLTENVNKHIGVTQLELLGQSVYEFVHPCDQEELRDLLAPRPGLSKKSAK
EQPTDRNFFLRMKSTLTSRGRTVNIKSATWKVLHCTGHMRPFGGSSTAPPAARVMTVLCE
PIPHPSSVEFPLDTCTILTRHSMDLRFTHCEGRVSELVGYKPDDLIGRSAYEFHHALDSD
HVNKSLHTLLTKGQVITSQYRFLTNNGGFVWAETQATVLYSNKTSQPEAVVCLNFILSAI
EQPDTVFSVEQIRCGAVLKDEPLSPAPAAEAFEISDPEEEPLSSSAQTEDAGSNPSNAAE
LLNKPEKPDEVQLASENNDTDRRTAGFVELSFISSPTLTSVPDHPEKLCTPQLLQLLTPI
FDPLTPPPSTSPAPADNSALSSGEVEMLPSEVEKHFAICPTDEQQEGNMLENMDEMDLEM
LAPYISMDDDFQLTYQILKLLSLCVFRTHSADEDTLSVLFQDKRQKQEAMSTEEDIFLSH
KMLDSLEQTDQSDILLDSGPSGRSHLLTDRDPVLGGIQGLCDTAALIRDLFKPRCRGLSP
PLSPLT
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggagacaatagaagagagcaccgtggttaaacgaagcagttcggagcagaggaagctg
cgttctcgtgatgcagccagatgcaggcgaagccaagagacggaagtgttttatgagctc
gctcgcacacttccgctccctcgcagggtgtccacccatttggacaaagctgccatcatg
aggatcgctctcagcgtcctgcgtatgcagcgccttctgagatctgcaggtgaaaccaaa
aaggagtcggctgaggatgatatgaagcaagagcagcagcagcagcaggaggaagaggag
gatgaggaagaggaggatgagatggatgtgttctatccacaggcgctggccggtttcgtc
atggtgctgacagaagaaggagacatgatcttcctgacagaaaatgtcaacaaacacatc
ggcgtcactcagttggagctgctgggtcagagtgtgtatgagtttgtccatccctgtgac
caggaggagctcagagatctgctggctccacgtccaggattaagtaagaaatcagccaaa
gagcaaccaactgacaggaactttttcctgcgaatgaaaagcacattgaccagcaggggg
cgcacggtcaacatcaagtctgctacatggaaggttcttcactgcactggtcacatgcgt
ccctttggtggcagctccacagcgcctcctgcagccagagtgatgactgtgctgtgtgag
cccattcctcatccgtccagcgtggagtttcctctggatacgtgcaccatcctcacccgc
cacagtatggacctgcgcttcacccactgtgagggcagggtttcagagttagtaggatac
aaaccggatgatctgattggacgctcggcctatgaatttcatcatgcgctcgactctgac
catgtcaacaaaagcctgcacacattgctgacgaaaggtcaggtgatcaccagccagtac
agattcctgaccaacaatggcggtttcgtctgggctgaaacgcaggccaccgtcctctac
agcaacaagacgtcgcagccagaggccgtcgtctgcctcaacttcatactcagtgccatc
gagcagccagacactgttttctcagtggagcagatcagatgtggcgcggtgctcaaggat
gaacctctctcaccagcacctgcagcagaggcctttgagatctctgatcctgaagaggag
cctctgagcagctccgcccagactgaggatgccggttcaaatcccagcaacgctgcagag
ctcctgaacaagccagagaagccagatgaggttcagttggcctctgagaacaacgacacc
gacaggagaacagcaggatttgtggagctgtcgttcatcagttcacctactctgacctcg
gtgcccgaccaccctgagaaactctgcaccccacagctgctgcaactcctcacacccatc
tttgaccccctgaccccgcccccgtccacctcaccggccccagcagacaattctgctctg
agctccggtgaggtggagatgttaccaagtgaggtggagaagcattttgccatttgtcca
acagatgagcaacaggaaggaaacatgctggagaacatggatgaaatggatctggaaatg
ttggccccttacatctccatggacgatgacttccagctcacctaccaaattttaaaactt
ttgtctctctgtgtcttcaggactcacagtgcagatgaggacacactgtccgtgctgttt
caggacaagaggcagaaacaagaggccatgtcaacagaagaggacatttttctcagccac
aaaatgctggacagtctggagcaaaccgaccaatcggatattttgctagactcgggacca
agtgggcggagtcacctcctcacagacagggaccctgtgttaggaggcatacagggcctg
tgtgatactgcagctctgatcagagatttgttcaaaccacggtgtcgtgggctgtcgccg
ccactgtcacccctgacctga
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