Cynoglossus semilaevis (tongue sole): 103377918
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Entry
103377918 CDS
T04866
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 20-like
KO
K24731
dystrophia myotonica WD repeat-containing protein
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csem04990
]
103377918
Domain-containing proteins not elsewhere classified [BR:
csem04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
103377918
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Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WD40_Prp19
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
PD40
Beta-prop_IFT140_1st
NBCH_WD40
ATP-synt_E
Motif
Other DBs
NCBI-GeneID:
103377918
NCBI-ProteinID:
XP_016887447
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All DBs
Position
4:7830676..7839096
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AA seq
683 aa
AA seq
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MAGDGGALKDINDIKSQFRTREGFYKLLTLSDSQQRGGLPRGPTAGATLGPGPGPGPIPG
GGVGLLQGPGAAAAAAQRAPAASSSSNAAANSSPAGFLPPVRVSMVKLQPEDPSEDSERV
CFNIGRELYFYTYTNIKKAVDLSKPIDKRIYKGTQPTCHDFNQYSATAERGALIVGVSAG
QFQYLDPIKKETSKLFNEERLIDKSKVTCLKWLPKSENLFLASHASGHLYLYNVDHPCGT
TAPQYSLLRQGEGFAVYACKTKTPRNPLLRWAVGEGGLNEFAFSPDGVHVACVGQDGCLR
VFHFDSMELQGVMKSYFGGLLCVSWSPDGKYLATGGEDDLVTVWSFAESRVVARGHGHKS
WVNVVAFDPFTTSLEDDEPMELSGSEEDLHQGVQNNSMHFGRVRTSSTLSRLSRHSSKGG
GSASVTYRFGSVGQDTQFCLWDLTDDVLYPRLPLSRAFTNTFGPSLSNSGSVVANSISGG
GGSGGVEGHHHPPITNTGTSNPPTLPLPLPRSLSRSNSLPHPAVANTSKSQGTTEGGGSG
GGGGSSGTGNSTPFSIGRFATLSLQERKSDKSGGSSGVEKEHKRYHSLGNISKSNDKINV
APRSNRLDAAKVLGTTLCPRMNEVPLLEPLVCKKIAHERLTVLVFMDDCIITACQEGLIC
TWARPGKTNLTAQNGNSPSGTVV
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggccggagatggcggcgctctgaaggatatcaatgatattaaatcacagttccggacc
agagagggcttctacaagctgctcaccctctcggactcgcagcagcggggcggactgccg
cggggtcccaccgccggagccacgctgggccccgggcctggacccggtccgatacccggt
ggaggtgtcggtctgctgcaggggcccggagccgccgccgcagcagcgcagcgtgcgccg
gctgcctcctcttcttccaatgccgccgctaactcctctccggcgggcttcctgccaccg
gttcgggtctccatggtcaagctgcagcctgaagacccgagcgaggactcggagagagtg
tgctttaacatcggcagggagctgtatttctacacatacaccaacatcaagaaggctgtg
gacctcagtaagcccatagacaagaggatctacaaagggactcagcccacgtgtcatgac
ttcaaccagtattcagccacggcagagaggggcgctctcatcgtgggggtttcagcaggg
cagttccagtatctcgacccgatcaagaaggagaccagtaaactcttcaacgaggagagg
ctgatagacaaatccaaggtgacgtgtctaaagtggcttcctaagtcagagaacctattc
ctggcctcccatgccagtggccacctctacctctacaacgtggaccacccctgtggcacc
acggctccacagtactcactgctgcgacagggcgaagggtttgcagtttatgcctgcaag
accaagacgccacgcaaccctctgttgaggtgggccgtgggcgagggcggccttaacgag
tttgctttctctcccgatggtgtccacgtggcgtgtgtcggtcaagatggctgcctgcgt
gtcttccactttgactccatggagctgcagggtgtgatgaagagctactttggggggctg
ctctgtgtgtcatggagtcctgatgggaaatatctcgccacaggaggagaggacgacctc
gttaccgtctggtcgttcgcagaaagcagagtcgtagcaaggggtcatggccacaaatcg
tgggtcaatgtcgtggcctttgaccccttcacaacctctttagaagatgatgagcccatg
gaactaagtggcagtgaggaggacctccaccagggggtacagaacaattccatgcacttc
ggccgagtacgaacaagcagcacgttgtcgcgtctttctcggcacagctctaagggcggg
ggctcggcctcggtcacctaccgctttggctcagtggggcaggacactcagttctgcctg
tgggacctgactgatgacgtgttgtacccacgtctaccactgtctcgcgcctttactaac
acattcggcccgtcactgtctaactctggaagtgtggttgctaacagcatctcgggtggg
ggaggaagtggaggggttgaagggcaccatcacccaccaatcaccaacacaggcacatcc
aacccacccacccttcccttaccacttcctcgctccctctcacgatccaactcgctgccc
cacccagcagtggcaaacacttccaagagtcagggcaccacggagggcgggggaagtgga
ggcggtggcggcagcagtggcacagggaacagcactccattcagtataggccgctttgcc
acgctgtcgctccaggagcgcaagtcggacaagtctggcggcagcagtggggtggagaag
gagcataagaggtaccacagcctgggcaacattagcaaaagcaatgacaagatcaacgtg
gcgccgcgaagcaatcgcctggacgctgctaaggttctgggcaccacactgtgcccacgc
atgaacgaggtgccgctgctagagccgctggtgtgcaagaagatcgcacatgagaggctg
acggtcctggtcttcatggacgactgcatcatcacagcctgccaagagggtctcatctgc
acctgggcacggccagggaagacgaacttgacagcacagaatgggaactctccgagcggc
acggtggtatag
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