KEGG   Cynoglossus semilaevis (tongue sole): 103377991
Entry
103377991         CDS       T04866                                 
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103377991 (exosc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csem03019]
    103377991 (exosc5)
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     103377991 (exosc5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 103377991
NCBI-ProteinID: XP_008307243
UniProt: A0A3P8VAI9
LinkDB
Position
4:9536194..9538353
AA seq 219 aa
MEACSISNLKLREFGCEQSLLSRPDGSASFIQGDTSVCAGVYGPAEVKVSKEIYDRATLE
VLIQPKVGLAGVRERSQEQCVRETCEASLLLSLHPRSSLTLVLQVIHDDGSLLSCFLNAA
CMALMDAGLPMSCLFCGVTCAISADGQIVTDPTAAQEKESRALMTFAIDSTERNILMSST
KGSFSVHELQQCIVVSQKASEKMFQFYRDSVKRRYSKYL
NT seq 660 nt   +upstreamnt  +downstreamnt
atggaggcgtgcagtatttccaaccttaaattgagagagttcggttgtgaacagagctta
ctctctcggccggacggttcagcttcttttattcaaggagatacaagtgtgtgtgctgga
gtgtatggcccagctgaggtcaaggtcagcaaagagatctatgacagggccacactggag
gttctaatacagcccaaagtgggattggcaggtgtcagagagcgatcacaagagcagtgt
gtgcgagaaacctgtgaagcatctctactgttgtcacttcaccctcgctcctccctcacc
cttgttcttcaggtgattcacgatgatggatctctattgtcttgctttttaaatgcagcc
tgtatggctctaatggatgctggtctgccaatgagttgcctgttctgtggtgtcacgtgt
gccatcagtgcagacggtcagatagttacagaccccacagctgctcaggaaaaggaaagt
cgggctttgatgacctttgcgattgacagcacagaacgaaacatattgatgtcatcaacc
aaaggatctttttctgttcatgagctacagcagtgtatagttgtcagccagaaagcctca
gagaagatgttccagttctatcgggattctgtaaaacggcgatactccaaatacctctga

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