Cynoglossus semilaevis (tongue sole): 103377991
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Entry
103377991 CDS
T04866
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103377991 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103377991 (exosc5)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103377991 (exosc5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
103377991
NCBI-ProteinID:
XP_008307243
UniProt:
A0A3P8VAI9
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Position
4:9536194..9538353
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AA seq
219 aa
AA seq
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MEACSISNLKLREFGCEQSLLSRPDGSASFIQGDTSVCAGVYGPAEVKVSKEIYDRATLE
VLIQPKVGLAGVRERSQEQCVRETCEASLLLSLHPRSSLTLVLQVIHDDGSLLSCFLNAA
CMALMDAGLPMSCLFCGVTCAISADGQIVTDPTAAQEKESRALMTFAIDSTERNILMSST
KGSFSVHELQQCIVVSQKASEKMFQFYRDSVKRRYSKYL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtgcagtatttccaaccttaaattgagagagttcggttgtgaacagagctta
ctctctcggccggacggttcagcttcttttattcaaggagatacaagtgtgtgtgctgga
gtgtatggcccagctgaggtcaaggtcagcaaagagatctatgacagggccacactggag
gttctaatacagcccaaagtgggattggcaggtgtcagagagcgatcacaagagcagtgt
gtgcgagaaacctgtgaagcatctctactgttgtcacttcaccctcgctcctccctcacc
cttgttcttcaggtgattcacgatgatggatctctattgtcttgctttttaaatgcagcc
tgtatggctctaatggatgctggtctgccaatgagttgcctgttctgtggtgtcacgtgt
gccatcagtgcagacggtcagatagttacagaccccacagctgctcaggaaaaggaaagt
cgggctttgatgacctttgcgattgacagcacagaacgaaacatattgatgtcatcaacc
aaaggatctttttctgttcatgagctacagcagtgtatagttgtcagccagaaagcctca
gagaagatgttccagttctatcgggattctgtaaaacggcgatactccaaatacctctga
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