Cynoglossus semilaevis (tongue sole): 103378306
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Entry
103378306 CDS
T04866
Symbol
dhx36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103378306 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103378306 (dhx36)
03012 Translation factors [BR:
csem03012
]
103378306 (dhx36)
Enzymes [BR:
csem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103378306 (dhx36)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
103378306 (dhx36)
Translation factors [BR:
csem03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
103378306 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
103378306
NCBI-ProteinID:
XP_008307701
LinkDB
All DBs
Position
4:14240925..14253456
Genome browser
AA seq
1041 aa
AA seq
DB search
MSYGYRGGRGGRRGGRGGGGHRDGSTERRDRGGGVDRPPPHLKGREIGMWYARYGAVRRR
QADRRARAVVQMDEAREQHITKLLSSVQREQPFTDRGLRDSRASGSKDWSYFDGDLPEEQ
KRKIKSEEDDKELGLDQRKTALRSHGQSSPAVKEEPPDTWEEDDKDELQQEKEKKERHRY
NDKDLEFLFQEVVRDCSLDDDLRQDLQNKRSDPRYREMLKFREKLPSYGKREELVELIQS
DRVLVVSGETGCGKTTQVTQFILDDYISRGVGSTCRVVCTQPRRISAISVAERVAAERAE
SVGNGNSCGYQIRLQSRLPRKQGSLLYCTTGIILQWLRSDPLLSSVSHLVLDEIHERNLQ
SDVLLIIVKDLLKQRDDLKVVLMSATLNAVKFSEYFGNCPIIHIPGSTFPVEEFLLEDIV
EMTRYRPKTQERRSSWKRGFWQGRNSRAEKEQKEALYSERWPDYERSLRSRYSDNTISTL
QMLDENDKIDLDLILALIRHIVMNEEEGAILVFLPGWDNISSLNDLLMSQQMFKSESFII
IPLHSLMPTVNQTQVFKKPPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTNN
NISTMAAEWVSLANAKQRRGRAGRVRPGKCYHLYNSLRASLLEDYQLPEIMRTPLEELCL
QIKILKLGSVAQFLNKALDPPSEQAVSLAIKNLMDLNALDHSENLTALGFHLARLPVEPH
IGKLILFGALLSCLDPVLTMAASLSFKDPFFIPLGKEKMADMRRKVLSRNSKSDHLTIVN
AFQGWEEARQHGGRSEREFCWQNFLSANTLQMLYNMKTQFAEHLMHTGFVSSKNPKDSKS
NVNSDNEKLIKAVIVAGLYPKVATIRPSHSRKRPGVKVYTQADGKVCIHPKSVNAEETQF
NYTWLIYHLKMKTSSIFLYDCTEVSPFSLLFFGGDITIQKDEDQETIAVDEWIIFRSPSR
IAHLVKNLKKELDSLLQDKIQTPSPVDWENLKSKDCAVITAIIDLITTQEKPAGRSSDHR
GRHTHFTAHGWDDEDEDDDDE
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggttacagaggagggcgaggaggacggagaggaggaagaggaggaggagga
catagagatggcagcacagagaggcgggacagaggaggaggggttgatcggcctcctccg
cacctgaagggtcgggagatcggaatgtggtacgccagatacggagcagtgaggaggaga
caggctgacaggagggcgagagctgtggtccagatggacgaggccagagagcagcacatc
accaagctgctcagttctgtgcagcgtgagcagccttttacagacagaggcctcagggac
agccgagcttctgggtcaaaggactggagttattttgatggagatttgcctgaagaacag
aaaaggaagataaaatctgaggaagatgataaagaactcggtttagaccagaggaagaca
gctctcagatcacatggacaatcgtctccagcagttaaagaagaacctccagacacctgg
gaagaagatgacaaagatgaactgcagcaggagaaggagaagaaggagagacatagatac
aatgacaaagaccttgaattcctcttccaggaagtagtcagagactgttctttggacgac
gatttaaggcaggatttgcaaaacaagagatctgaccccaggtacagggagatgctgaaa
ttcagagaaaaattgccgtcttatgggaaaagagaggagctggtggagctgatccagagt
gaccgtgttctggtggtgagcggagagacgggctgtgggaagaccacccaggtcactcag
tttattctggacgactacatcagcagaggagtgggctccacgtgtcgggtggtttgcaca
cagccacgacgtatcagcgccatctctgtggcagaacgtgtggctgcagagagagcagag
agtgtggggaatggaaactcctgtgggtaccagatccgtctgcagagccggttaccccgg
aaacaaggttcgctcctttactgtaccacaggcattattctgcagtggcttcgctccgac
cctctgttgtccagtgtcagtcacctggtcctggatgagatccatgagaggaaccttcag
tccgacgtgttgctcatcattgtgaaggaccttctaaaacagagagatgaccttaaggtt
gtcctgatgagtgcgaccctcaacgcagtgaagttctccgagtactttggcaattgtcca
ataatccacattcctggttccaccttcccagtggaagagtttctactggaggacatagtg
gagatgacgaggtaccgtcctaagactcaggagcgtcgttcctcttggaagagaggtttc
tggcagggtcggaactccagagcagagaaggagcagaaggaggccctatacagtgagcgt
tggcctgattacgaacgctcactgaggagcagatactctgacaacaccatctccactctg
cagatgttggatgaaaatgataagattgatctggacctgattctggccctgattcgtcac
atcgtcatgaatgaagaggaaggagctattctggtctttctgccaggctgggacaacatc
agcagtttgaacgacctgctaatgagtcagcagatgttcaaatcagaatccttcatcatc
atccctctgcactccctcatgccaacagtcaaccaaacacaggtgtttaaaaagcctcct
ccaggagttcggaagattgtcattgccaccaacatcgctgagaccagcatcaccattgat
gatgtggtgtttgtgatcgatggaggaaagattaaagagacgcacttcgacaccaacaac
aacatcagcaccatggcagcagagtgggtcagtctggctaacgctaagcagaggagagga
cgagcaggaagggtgcgtccagggaagtgctatcacctgtacaacagtctgagggccagt
ctgctggaggactatcagctaccagagatcatgaggactccactggaggagctgtgtctg
cagatcaagattctgaagctgggctctgtggctcagttcctgaacaaagctctggacccc
ccctctgaacaggccgtcagcctggccatcaagaacctcatggacctgaatgctttggac
cattcagagaacctgacagctctggggttccacctggcccgtcttcctgtggaacctcac
attggtaaactgatcctgtttggagctctgctcagctgcctggaccctgttctcaccatg
gctgcgtccctcagcttcaaagacccattcttcatccccctgggtaaagagaagatggca
gacatgaggaggaaagttctatccagaaactccaagagcgatcatctcaccatcgtcaat
gctttccagggctgggaggaagccagacagcatggaggcagaagtgagagggagttttgc
tggcagaacttcctgtctgcaaacacactccagatgctgtacaacatgaaaactcagttt
gctgaacatctgatgcacacaggcttcgtcagcagtaaaaaccccaaagactccaaatct
aacgtcaactcagacaatgagaagttgatcaaagcagtaatcgtggcagggctgtatcca
aaggtggccacgatcagaccgtctcacagcaggaagagaccaggggtgaaggtttacact
caggcagatggaaaagtctgcattcacccaaagtctgtcaacgctgaggagacacagttt
aactacacttggttgatctatcacctgaagatgaagactagcagcatcttcctgtacgac
tgcaccgaagtgtctccattctccctgctcttctttggaggtgacatcaccatccagaag
gacgaagaccaggagaccatcgctgtggacgagtggatcatcttcaggtccccgtctcgc
atcgctcacctggtgaagaacctgaagaaggagctggactctctgctgcaggacaaaatc
cagacgccgtctccagtggattgggaaaacctgaagtccaaagactgtgctgtcatcacg
gccatcattgacctgatcaccacccaggagaaacctgcaggaaggtcgtctgaccacaga
gggcgacacactcacttcactgctcacggctgggatgatgaggatgaagatgatgatgat
gagtag
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integrated database retrieval system
