Cynoglossus semilaevis (tongue sole): 103378423
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Entry
103378423 CDS
T04866
Symbol
arhgef12
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04270
Vascular smooth muscle contraction
csem04625
C-type lectin receptor signaling pathway
csem04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
103378423 (arhgef12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
103378423 (arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
103378423 (arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103378423 (arhgef12)
Membrane trafficking [BR:
csem04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
103378423 (arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
103378423
NCBI-ProteinID:
XP_016887394
LinkDB
All DBs
Position
4:complement(16105308..16140592)
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AA seq
1393 aa
AA seq
DB search
MSDTQSSFTDRFPKKASRTSSIGKDHPPDKKPKSDKTSLSSNEFDPTEALVVQKSGSSSV
LADGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKV
NGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLAHIPLPEAESIMLGVSISSPNSPATE
RPYSPQDRLSSTQHPWEENSIQRVDILQKMLLKEQQELKAMKEEYSKNPSPKLLKEIQES
KKHIPQLHGQLFKATGAAQEAFPGGDADDGSMFEPEHTPTSRGDNNTDVSWSSTPLSHRF
GLGSPDSVYPRETSCPSPKNTPRNSYNSCYSPEAEDTTDLDSMSPTTVSSPSSSRIVSQI
IGAEDDYFDSDQEQTNGQCNCFNSIEQLKSRPAHLAAFLHHVISQFDAAPVLCYLYADFY
KQTNSKETRRVFMDLHTFFIDRGANLKVAVPESISSDLDRRRTELIPEEINRQHVQTLQD
SLLPDIQRNLEDFRQKRSMGLTVAEVELSRLDQERVRDRVTLERERSYAENIIAKIEDIL
LTTQNTEEEKCTTMQYVIYTYMKHLGVRVKEPRNLESKRVRINFLPKIKKSIKTEKEGEE
VKVKKPRFPSILGPQRRPSRIESGPVGKALDSRPRPQKQLSTPSLGTNEHAEPGRLRGSQ
SSEGSELMHSMSFNTSSPNSNNYSSDSSRDADMVGTPTSGPHRLSDGHQSDPLDGLLYPA
THFDLYSLDQLQEDDRESDKAHDGMPKAIRRLDGLGPADAQSEDDQVYQKLSKEAILPPA
DIKNIFSNLDEILHLHVSILEQMLAVRKRNESSVIDQIGDDLLSWFIGGEEEKIKQAVGT
FCCNQPFALEIIKTKQKKDSRFFSFIQEAESNRLCRRLQLKDIIPGMIAYYVPGRQLSGQ
HSWSYFFLLLCVLDNTAEKDKVKQAADCCRMILNHVNQALKESEDKQRLEDYQRRLDLSS
LKQTDNPVIQELKNLDLTKKTLVHVGPLSWKVNKDKTIELFTLLLEDILVLLQKQDERLI
LKCHSKNLAGTADTKHIFSPIIKLNTVLVRSVATDNKSFFVLSMSENGAQIYELMAPTVA
DQKTWQELIIQRADAMKVKPHNIIPLPQSDGERDGVDIITAGVSKLSRDPDRTSTGSTQS
TDKESSPTSRRALQSCLPGNNLFDRVKFVEKEKEDGYVDPELPYQVSDDGRAADSFNMFP
SRAAEALKTLAALKQELVTQLMSQEPIEQTKQSTGARLLRATSLRTPIDSRARVMAHNGS
DKNSTHTEDQAQDLGSGDTGFFDSPDDYAEFLVLEGYGRAGESSTDDEILASTTGKQLSS
AQGCATDSGMNLRFSSTSQAGSLSIFSRQVLSHLRNLQSNLNYLKDVEAKYNNLLRLRSE
RSAEDPDRNKDKR
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttcactgacaggtttcccaagaaagcaagcagaaccagc
agcatcggtaaagaccaccccccagacaagaaacccaaaagtgacaaaacttcactttcc
tccaatgagtttgaccccacagaagctttggtggtgcagaagagtggcagcagcagtgta
ctagcagacggaaagcccgagtcctgtggtctggtgcagcgatgtgtgatcatccagaaa
gatgagaatggcttcggtctcactgtcagtggcgataacccagtgtttgtgcagctcgtc
aaagaagatggcgctgcgatgcgagcaggtgttcagacaggagacaggatcattaaggtc
aacgggactcttgttacacattctaatcacattgaagtggtgaagctcatcaaatcgggc
tcatatgtggccctcacagtgttggggcgccccccggggctggcccacatccctctgcct
gaggcagagtctataatgttgggtgttagcatttcctctccaaattccccagcaacagag
cgaccctacagtcctcaggacagactctcatcaacacaacatccatgggaagaaaatagc
atccagagggtcgacatcttgcaaaagatgctcttaaaagagcagcaggagttgaaggcc
atgaaggaggagtacagtaagaacccctccccgaaactactgaaagaaatccaggaatct
aaaaaacacattcctcagctgcacggtcagctcttcaaggccactggggcagcacaggag
gcttttccaggtggcgatgcagatgatggtagcatgtttgaacccgagcacacccccacc
tccaggggagacaacaacacagacgtgtcctggagcagcactcctttatctcacagattt
ggacttggatctccagactctgtttatccaagggagacatcctgtcccagcccaaagaac
acccccaggaacagctacaactcctgttactcaccagaggcagaggacacaactgacctg
gactcgatgtccccaaccacagtcagcagtccttcatcttctcgcatcgtctcacaaatc
attggagctgaggacgactactttgattcagaccaggagcagacaaacggccagtgtaac
tgctttaacagtattgaacagctcaagtcaagacccgcccatttggcagccttcctccac
catgttatttcccagtttgatgctgctccagtgctgtgctacctctacgctgacttctac
aagcagaccaactccaaagagaccagacgggtgttcatggacctgcacaccttcttcatt
gataggggagcaaatttaaaagtggctgttcctgaatccatctcatctgacctggaccgg
cggcgaacagaactgatcccagaggaaatcaacagacaacatgttcagactctgcaggac
tctttgctccctgacattcagaggaaccttgaagatttcaggcagaagcgcagcatgggt
ttaacagtggctgaggtggaactatccagactggaccaagagcgagtcagagaccgtgtc
actctggagagagagcgctcgtatgctgaaaacatcatcgccaagatagaggacattctg
ttaactactcagaatacagaagaagaaaaatgcactacaatgcagtatgttatctatacg
tacatgaagcaccttggtgtgagggtgaaggaacctcgcaacctggagtccaaacgggtc
cggataaactttctccctaaaattaagaaaagcataaagacagaaaaggaaggagaggag
gtgaaggtgaagaaacccaggtttcccagcatccttggtcctcagcgtcgtccgagccgc
attgagtccggaccggtgggtaaagccttggacagtcggccacgacctcagaaacaactg
tctacgccgtcactggggacaaacgaacacgctgagcctggacgtttgcgtggcagccaa
tcgagcgagggctccgaacttatgcactccatgtctttcaacacgtcatcccccaacagc
aacaactacagctcagattccagcagagatgccgatatggtcggaacgcccacttcaggc
ccacacaggctaagtgacggccatcagtccgatcctctggacggtctcttataccctgct
acgcactttgacctctacagcctggaccagctgcaagaggatgacagagagagtgacaaa
gctcacgatggaatgccaaaggccatcagaaggcttgatggactgggtcctgctgatgcc
cagagtgaggatgaccaggtttaccagaaactgtcaaaagaggccattctgcctcccgct
gacatcaagaacatcttctccaacctggacgagattctacatctgcacgtttcaatattg
gagcaaatgctagcggtgcggaagaggaatgagtcgtcagtaattgatcagataggagat
gacctgctctcctggttcatcggtggtgaagaggagaagatcaagcaagcggtggggacc
ttctgctgtaaccagccttttgctctggagatcatcaaaaccaaacagaagaaagactcc
aggttcttctccttcatccaggaggcagagagtaacagactctgcagacggttgcagctg
aaagacatcattccaggaatgatagcgtattatgtgcctggcaggcagctctctgggcag
cacagttggtcttatttcttcttattattatgtgttttagacaacacagcggagaaggac
aaagtgaagcaggcagcagactgttgtagaatgattttaaatcatgtcaaccaggcttta
aaagagtctgaggacaagcagaggttagaggattatcaacgaagacttgacctgtcctca
ctgaagcagactgacaacccagtgatccaggagttaaagaacttggatctaaccaagaaa
acgttggtgcacgtgggaccactctcatggaaagtgaataaggacaagactattgagttg
tttacactcctcctggaggacatcctggtgctgctgcagaaacaagatgaacgccttatc
ctcaagtgtcacagcaaaaacctggcgggcaccgcagacaccaaacacatcttcagcccc
atcatcaaactcaacacggttctggtgcgatcagtggccacagacaacaagtccttcttc
gtcctttctatgtccgaaaatggagcccagatctatgagcttatggcgcccacagtcgct
gatcaaaaaacgtggcaggagttaataatccagagagctgatgccatgaaggtcaaacct
cacaacattataccgttacctcagagcgatggggagagagatggagtggatatcatcacc
gcaggtgtctccaagctgagcagagaccccgaccgcacgtccacagggagcacacagtcc
acagataaagagagcagcccaacttctaggagagcactgcagagctgtctacctggtaat
aacctgtttgacagagtaaaatttgtggaaaaggagaaggaggacggctatgtggaccca
gagcttccttaccaggtctccgacgatggcagagcagcagattcattcaacatgtttccc
tctagggcagctgaagctctgaaaacattggcagcgttgaagcaggagctggtcacacag
ctcatgtctcaagagcccatagagcaaaccaaacaatccacgggggctcgtctcctcagg
gccacctcactgcgaacgcccattgacagtcgtgcccgggtgatggcacacaatggctcg
gacaagaacagcacccacaccgaggaccaggctcaggacctgggttctggagacacgggc
ttcttcgactctcccgatgattatgcagaattcttggtcctggagggctacggcagggca
ggagagagcagcacagatgacgagatcctggcgtcgaccacagggaagcagctgagcagc
gcacagggctgtgccactgactcaggcatgaatttaagattttcttcaacctcccaggcg
ggcagcctgtctatcttcagtcgacaggtgctgtcacatctcagaaaccttcagtccaac
ctcaactacctaaaggatgttgaggccaagtacaataatttattacgcctgaggtcagaa
aggtcagcggaagacccggacagaaacaaagataagagatag
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integrated database retrieval system
