KEGG   Cynoglossus semilaevis (tongue sole): 103378475
Entry
103378475         CDS       T04866                                 
Name
(RefSeq) lissencephaly-1 homolog
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem00565  Ether lipid metabolism
csem01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:csem00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    103378475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csem03036]
    103378475
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csem04147]
    103378475
Chromosome and associated proteins [BR:csem03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    103378475
Exosome [BR:csem04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103378475
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_DCAF4 WD40_RFWD3 LisH Beta-prop_RIG_2nd LisH_PAC1 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_DCAF12 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Ge1_WD40 Nucleoporin_N Pox_A_type_inc Beta-prop_WDR11_2nd Beta-prop_IP5PC_F DUF2570 ARMC9_LisH LisH_2 SutA-RBD
Other DBs
NCBI-GeneID: 103378475
NCBI-ProteinID: XP_008307930
UniProt: A0A3P8WSX7
LinkDB
Position
4:17235081..17252900
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDNNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVSQKRDPKEWIPRPPERYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYESGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILDATGTE
NKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHPGGKFIVTCADDK
TLRIWDYKNKRCMKTLYAHEHFVTSLDFHKAAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacaacggcaaagagatgagttaaatcgagcaatagccgattatctacgt
tccaatggatatgaagaggcatattccacgttcaaaaaggaggcagaattagataataat
gaagaattggataaaaagtacgctggccttttggaaaaaaaatggacctctgtcattcga
ttacaaaagaaggtaatggagcttgaatctaaactaaatgaagctaaagaggagatcact
cttggtggccccgttagtcagaaacgtgacccaaaagaatggatcccacgtccaccagag
cggtacgcgctgagtgggcatcgcagtccagtcacccgtgtcattttccacccagtcttc
agtgtcatggtgtctgcatctgaagacgccacaataaaggtttgggactatgaatcagga
gactttgaacgcacactgaaaggccacacagattcagttcaggacatctcttttgatcat
actggtaaactgctggcatcctgctctgcagacatgactatcaagctgtgggattttcaa
ggctttgaatgcatcaggaccatgcatggacatgaccacaatgtttcgtctgtagccatc
atgcccaatggtgatcacattgtttctgcctcaagagacaaaaccataaaaatgtgggag
gtggcaactggctactgtgtgaagaccttcacaggccatcgggaatgggttcgcatggtt
cggcccaaccaggatggaacacttattgccagctgttccaatgaccagacagtgcgtgta
tgggttgttgcaacaaaagagtgcaaggctgagctgcgggagcatgaacatgtggtggag
tgcatctcctgggcaccagagagtgcccatcctaccatcctggatgccacaggcactgag
aacaagaagagtggtaagccaggtcccttcctgctgtctggttccagagacaaaaccatt
aagatgtgggatgttagcactggaatgtgccttatgacactggttggtcatgacaactgg
gtgcgtggggtcctcttccaccctggtggcaagttcattgtgacttgtgcagatgataag
accttaaggatctgggactacaagaacaagcgttgcatgaaaaccctttatgcccatgaa
cactttgttacctctctggatttccacaaggctgctccctacgtcgtcaccgggagtgta
gatcaaactgtaaaagtgtgggagtgccgctga

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