Cynoglossus semilaevis (tongue sole): 103378556
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Entry
103378556 CDS
T04866
Symbol
arap1
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103378556 (arap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103378556 (arap1)
Membrane trafficking [BR:
csem04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
103378556 (arap1)
Endosome - Golgi transport
Arf GTPase associated proteins
103378556 (arap1)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
103378556 (arap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
RA
PH_11
SAM_1
PH_6
SAM_2
PH_8
PH_3
PH_13
PH_9
Motif
Other DBs
NCBI-GeneID:
103378556
NCBI-ProteinID:
XP_016887601
LinkDB
All DBs
Position
4:19317780..19358631
Genome browser
AA seq
1587 aa
AA seq
DB search
MDVDLPSPMPRSHPMSHTDPGANVWDWLSVLRLDQYTVAFQNAGLMTLQQCRNLTQDQLG
SIGVTLPGHQRRILASLNKTQGSHDTQSVTHSPPGLSERTLQSEDVDSADELQKEKYLLS
SERPLEKRDTEMPRPAPRERTTPVPKEKQPTSQEDHGETDVERERPVPRERTKFSNNVVV
KCPPFPASSSTSPLDAPLPPVPPRSTTNCPPQPFLPSLSLIPPPKTPGTPAQDRHDVQGP
AAQKAPHDATSACTSTGPAARERPQTLDIQPHCQYLHPEGARKTSPVSPASASISSDRNA
PPLPPKLSAGSKGPPLIPCRVSTPSKTNSLSPAETSEEMDKDQAPQVPPRIRTPQCPESL
QQSSQLDSQLSLPVRRVSQTPSEITLDLPGNNSDANEETDILHLNSLDKEMLVQVQSPTK
GHYNSWLSDDELLDDDDDDEWLDRPISNIHGSVCLPSTGRRPSAAKNDSPELIATVIKTG
WLDKNPPQGVLYYQRRWVKLDADYLRYFDSEKDIYSKGIISTAFITNVASIGELKFEVAT
NNRTFIFRAENEAERNDWVAVLLDCTRGRYRRSNIGPGSPLAPDHQGYLELKGLRSKLYT
VVALDKVFLYKTIDDYRMGVGITSIDMNVGNVKDSDRRNFELTTPYRIFSFIAESEQQRE
LWVAAMRNAIGEALSNSDVANQIWAEPSNSFCADCGIAKPEWAAINLCVVVCKQCAGEHR
GLGPSVSKVRSLKMDRKVWTEELVQVFLSLGNERANSFWAANVPPSEALAPSSSSEERRR
FITNKYRQGKYRKYHMLYGNQTELNNALCVNIQCSDLLETLSLIFCGADVNCSTGMTNWP
SPLSLANARSQHLQAEIISHNLNTDQPQSEGVVAMQPVPYSKPPCVSYNGFLFKTASMAR
AVTERKAREEFSRRWCTLNDGVFSYYESDKNSNPNGALKVSEIVSLAVDAPEKHGYEYTF
EIYSESERLYLFGTDDADSHKEWVKSIARSFIPTAAEPLLKMSFERIGRLKCKDGLNLQT
SRLGWFALVGSTLHASLEDGQCEEIHLRKVNELSTQQDNGVLVLVEKGRTLYIEGERKLD
FAGWCAAIRSAGRSGGDTLSQQQLTETDIPVIVHSCIGYITQCGLASEGIYRKSGVNSRV
KALCERFRGDARSLCLREGEHQVDDVSSTLKRFFRELEEGLFTSADASSWLSTAGVQDES
VKIAQYQQLLNRLPHVNKATLQALINHLYCVQRFSELNQMNLHNLAIVFGPTLFQTDGKD
YSAGLTVEDLIQHYTLIFEVDEQQLKKQLEEITVIIKVREKMSTKFPSTEPGGHFICTVY
LEEKKETAEQHVKIPGSMTAMELTCEVLHRRNILVRDKEYWCCWEISNKEEMERPLHYQE
RVLPILHALGTDSHLVIKKHLAMEAMITYLSSKADASKHGMMKFREERSILGLGLTSGHF
HDRYFILNSSSLRMYKEIRSNRSERDWPVKNLNVYLGIRKRLRPPTCWGLTVLCESKKPD
RQEKQQFYVCCDTQSEMREWYANFLSVQYNGDVWPQDGLQQTRVSRVLPNTHHGNVSLIP
LRGSENEMRNSVAAFSQDPLSLFRDVP
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggacttgccctcccccatgccacgctctcatcccatgtcacacactgatccc
ggcgcaaatgtgtgggactggctgtctgttcttcgcctggaccagtacaccgtggcattt
cagaacgctggacttatgacactacagcagtgtcgcaacctcacacaagatcagctgggg
agcattggtgtcaccctgccgggtcaccaaagacgcatcttggccagtctgaacaaaaca
cagggaagtcatgacacacagtctgtcacacactctcctcctggcctgtctgaaaggacc
ctccaatcggaggatgttgactcagcggatgagttacagaaagagaaatatttgctctct
tctgagagacctctggaaaaaagagacactgagatgccgagacctgctcccagagaaaga
actacacctgtgcccaaggaaaagcaaccaacttcacaagaggatcacggagaaacggac
gtagagagggagagacctgtgcccagagagaggacgaaatttagcaataacgttgtagta
aaatgccctccttttccagcgtcctcctcgacttcacctctcgacgctcctctgcccccc
gtgcctcctcgaagcaccaccaactgccctccgcagccctttttgcccagcctgagccta
attcctcctccgaaaactcctggcactcctgcacaagacagacatgatgtccaaggtcca
gctgcgcagaaagcgcctcatgatgcaacctccgcctgcacttccaccggtcctgctgcc
agagaacgtccacaaacattagacatccagccacattgccagtatctccaccccgaggga
gcaagaaaaacatcacccgtgtcccccgcgtcggcttccatcagcagcgacagaaatgct
cctcctcttcctccaaaactcagcgcaggatccaaaggcccaccgctgatcccttgcagg
gtttccacgccttccaaaacgaacagcctctcacccgcggagacctctgaagagatggac
aaggaccaagctccacaggttccacctcgaatcaggacaccccaatgtccagaaagcctg
cagcagtcgtctcaactggacagtcagctgtctctgcctgtgagaagagtctcccaaact
cccagtgagatcactctagatttacctggaaataattcagatgcaaatgaagagacggac
atccttcaccttaattcattagacaaggaaatgcttgtgcaggtgcagagtccgacaaag
ggacattacaattcgtggttaagcgacgacgagctgttggatgatgatgatgatgatgag
tggcttgaccggcccatcagtaacattcatggcagtgtgtgtctgcccagcaccggcaga
cggccttcggccgctaaaaatgacagccccgagttgattgccactgtcatcaagacgggc
tggctggacaagaatccaccacagggggtgctttattaccagagacgatgggtgaaattg
gatgcggattatctgcgatactttgacagtgaaaaggacatttattccaagggaatcatc
tcaacagccttcatcactaacgtggcgagcataggagagctaaagtttgaggtggctacg
aacaaccggacatttatcttcagggcagaaaatgaagctgagagaaacgactgggttgcc
gtgctcctggactgcaccagagggcgctaccgccgcagcaacatcggccccggttcaccc
ttggccccagatcatcaggggtacctggagctcaaagggttacgctccaaactttacact
gttgttgccctcgataaagtctttctctacaaaaccatcgatgactatcgtatgggagtc
ggcatcacctccattgatatgaatgtgggaaatgtaaaagattcggaccgtcgtaacttc
gaactcacaacgccttaccgcatattcagtttcatagcggagtcggagcagcagagggaa
ctctgggtggccgccatgaggaacgctataggcgaggcgctgtccaatagcgatgtggcg
aaccagatatgggcggagcctagtaacagtttctgcgccgactgtgggattgccaaacca
gaatgggcagctatcaacttgtgcgtggtggtctgcaagcaatgtgcaggagagcacaga
ggactgggtcccagcgtgtccaaggtgcgtagtctgaagatggacaggaaggtttggaca
gaggaactcgtacaggtgtttctctcgctaggcaacgagcgggccaacagcttttgggct
gctaacgtcccgcccagtgaggcgctggcgccttctagcagcagcgaggagaggaggcga
tttatcaccaacaaatatcgccagggaaagtacagaaagtaccacatgctgtatgggaac
cagactgaactgaacaatgctttatgtgtgaatatccaatgcagtgatttgttggagacg
ttgagtttgatcttctgcggggcagacgtaaattgctcgactggcatgacaaactggccg
tcccctctgtccctggccaacgcacgctcacagcacttacaggctgaaataatcagccac
aatctcaacacagatcagcctcagtcagagggggttgtggccatgcagccagttccttat
tcaaaaccaccttgtgtgtcttacaatggctttctgttcaaaaccgcatccatggctcga
gcggtcactgagcgcaaggccagagaagagttcagccgccgttggtgcacgctgaacgac
ggcgtcttcagctattatgagagcgacaagaactccaaccccaatggagcactgaaggtt
tcagaaatagtcagtttggctgttgacgcgcctgaaaaacatggatacgaatacaccttt
gaaatctactcggagtcagagcgactatatctgttcggcaccgatgatgccgacagccac
aaagaatgggttaagtccattgctaggagtttcatacccactgccgcagagccgttactg
aagatgagttttgagaggatcggacggctgaaatgtaaagacggcttgaacctgcagacg
tctcggctgggttggttcgctctggtgggctccacactccatgcctcactagaggatggg
cagtgtgaggaaatccacctccgtaaagttaacgaactctccacacaacaggacaatgga
gtgctggttctggtggagaaaggcaggactttgtacatagaaggtgagagaaagttggat
ttcgcaggctggtgcgccgccatccgatcggcaggaaggagcggaggagacacgctgagt
cagcagcagctcaccgaaacggacatacctgtcatcgtccacagctgcattggatacatc
actcagtgcggcttggcgtctgagggcatttatcgcaaaagcggcgtgaactcgcgtgtc
aaagctctgtgcgagagatttcggggtgatgcccgcagtctttgtctaagggagggggag
caccaggtggacgacgtctccagtacgctgaaacgcttcttcagggagttagaagaagga
ctgttcacatcagcggatgcaagcagctggctcagtacagcaggcgtccaggatgaaagt
gtgaaaattgctcagtaccagcagctgctgaacagactgcctcatgtgaataaggccaca
ctacaagcccttatcaaccacctctactgtgtgcagcgtttctctgagctcaaccaaatg
aacctccacaacctggctatagtcttcggccccacactgttccagacagatgggaaggac
tacagcgccggcctcactgtagaagacctcatacagcactacacacttatctttgaggtg
gatgagcagcagctaaagaagcagctggaagagatcactgtcatcattaaagtcagggaa
aaaatgagcacaaagtttcccagcactgagcctggtggacatttcatctgcaccgtttac
ctggaggagaaaaaagaaacggctgagcaacacgtgaagattcctggctctatgacagca
atggagctgacgtgtgaggtccttcatcgacgtaacatcctcgtcagagacaaggagtac
tggtgctgctgggagatcagcaacaaggaggaaatggagcgtccattgcactatcaggag
cgtgtcctacctattcttcacgccttaggcacggactcccatctggtcataaagaagcat
cttgctatggaagcaatgatcacttacctgtctagtaaagcggacgcatccaaacatggg
atgatgaaattcagagaagagcgaagcatcctgggactgggactgacctctggacatttc
catgaccgatacttcatcctcaactccagctcactccgaatgtacaaagaaatcagaagt
aaccgctcagaacgtgattggccagtgaaaaacctcaatgtttacttaggaatcaggaaa
agactccgtcctcccacttgttggggcctgacggtgttatgtgagagtaagaaaccagat
cgacaggagaagcagcagttctatgtttgctgtgacacccagtcagaaatgcgagagtgg
tacgcaaattttctcagcgtccagtacaacggtgacgtctggcctcaggacggtctgcag
cagacgagggtgagccgcgtgttgcccaacacgcaccacggtaacgtttcactgataccc
ctgcgtggcagtgagaatgagatgcggaacagcgtggcagctttcagccaagaccctctt
tctctttttagggatgttccataa
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