Cynoglossus semilaevis (tongue sole): 103378650
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Entry
103378650 CDS
T04866
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103378650 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csem01009
]
103378650 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csem04515
]
103378650 (pcdh20)
Protein phosphatases and associated proteins [BR:
csem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103378650 (pcdh20)
Cell adhesion molecules [BR:
csem04515
]
Cadherins
Protocadherins
103378650 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
103378650
NCBI-ProteinID:
XP_008308149
UniProt:
A0A3P8UGI0
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All DBs
Position
5:2829674..2834822
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AA seq
891 aa
AA seq
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MIMLNSRHHSSSRRGGTWGLCIILLYISPPFCFASFSQAKELIYKIKEGLPRGTFIGSIG
VDLDLDFTVKPPFLFSLPQTSISDQYVNLNNTTGELYTSATDIDRETLCPDNAERYGCLL
SLDVFLLPQQYFQLIKVKIFIEDVNDNRPKFPVDEITLSVPENTPINSRYAVEHSAVDPD
LGPNGVQTYWLVNDFGVFTLDVEENEGGELTPFLIVTDALDRERQDEYITDIIAEDGGSP
PLLGAATFRIIITDVNDNCPQFSETHINVSVRGNSSKGSYLTRLHAFDPDQGANAQISYA
YSERVTKETRSWFHLNRTTGVITLAGKIDSASTTFYKLTVLAFGPGCIPALATVSVHVIK
VVSGPPAVIARYIAPEKDGVVTIKESEPAFTPIAFFTVRNIATNQRVDCLLEGTGPFRLV
PYQQLKYEYLLETTAPLDYEVIEEYDLIVVAENTGGLVMKTFLKVQVLDENDNAPVFQQS
SVELLIEENNPPNSFLTQLKAADPDSGSRGEVIYLLGGDTPGIFAIDRVTGVLNVTTSLD
REEKETYRFLVRAVDQGTPRRESIATVVVTVKDQNDNSPRFIDKDFTFFVPENFPGYGEI
GVISVTDADAGENGWVALSILNGSDIFMIDTGRGALRTKTPLDREQQGTYHLWIEASDGG
EPRLSCVTMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPNTLPGTSITEVYAVDKDTGMNA
VIAYSIIKRKGGETESFDIDSNTGNITLKRGLNNRGLCSLLVKVSDHGQPEPLFSTVMVN
FFVNETVSNESYIQSLLTRDADIQIEEKPWFIGQMTEGPERYELFPCQPVVIVLSLTCLG
LFIMVVTLMSYISCQKLKKRKKKQIEVEVPLKQNNDSMQVVNRKIRQISNL
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgttaaacagcagacatcacagctccagcagaagaggaggaacatggggatta
tgcatcatccttctttacataagcccacctttttgttttgcgagtttcagccaagcaaaa
gagctcatctataaaataaaggaaggattaccgagaggaaccttcattggctccattgga
gtggacttggatttggattttacagtaaagccccccttcttattcagtctcccacaaacg
agtatcagtgaccagtatgtgaacctaaataatacgaccggggagctttatacgtctgcc
acggatattgacagggagactctctgtcctgataacgctgagagatatggatgtctcctc
tctctggatgtatttttattgcctcagcagtactttcagctgatcaaagttaaaatcttc
attgaggatgtcaatgacaacaggccaaagttcccagtggatgagatcactttatctgtt
cctgaaaatacacccatcaattctcgctacgcagtggaacattctgctgtggatcccgac
ctgggccctaatggagtacagacctactggctggttaatgattttggagtgttcactcta
gacgtagaagaaaatgaaggaggcgagctcactccctttcttatagtgacagatgccttg
gacagagagagacaggatgaatacataacagacatcattgcagaggatggcggttcccct
cctttacttggggcagctacgttcagaattatcatcacagatgtcaacgataattgtccg
caattttcagaaacacacattaatgtcagcgtacgtggaaatagcagtaaagggtcatat
ttgactcgtctgcacgcttttgatcccgatcagggtgcaaatgctcagatcagctatgct
tacagcgaacgagtgacaaaggagacgaggagctggttccacttgaaccgaaccacaggg
gtgatcacgctggcaggaaaaatagactctgcctcgaccacattttataaactcaccgtt
cttgcatttggacctggctgtattcctgctctggccactgttagtgtccatgtcataaaa
gttgtcagtgggccccctgcagtcatagccaggtatattgcaccagaaaaagatggagtg
gtaacaataaaagagtccgagccagctttcacaccaatagctttctttactgtcaggaac
atcgcaacgaaccaaagggtagactgtctcttagaagggacgggtcccttcaggcttgtc
ccctatcagcagttaaaatatgaatacctgttggaaacaaccgcgcctttggactatgaa
gtaatagaggagtacgatcttattgtggttgctgagaacactggagggctagtcatgaag
acatttctgaaagtgcaggtattagatgagaacgacaacgcaccagttttccagcagtct
tcagtggagttgctcatagaggaaaacaacccaccgaattctttcctgacccagctcaaa
gccgcagacccggacagcggaagccgtggggaggtaatctatctcctgggaggcgacact
cctgggatctttgctatagatcgtgtgacaggggtcctgaatgtaaccacatctctggac
cgtgaggagaaggagacataccggtttcttgtgagagcagtggaccagggaacacctagg
agggagtcgattgcgaccgtggtggtgacggtgaaagaccaaaacgataacagtccacga
ttcatcgataaggacttcactttctttgttccggagaacttcccaggttatggtgagatc
ggagtcatctctgtgacggacgcggatgctggagaaaacggatgggtggcgctgtctatc
ctgaacggcagtgacatctttatgatagacactgggcgaggggcactcaggactaagaca
ccccttgatcgtgagcaacaaggaacataccatttgtggatcgaggcctcagatggtggg
gaaccccgactgtcctgcgttaccatggtgactgtgttgttgttagatgttaatgacaac
ccacccattgtcctcttcccccaatccaatcagtcctacatgcttgtactacccaacaca
ttacccggcacatccatcactgaggtgtatgccgtggataaagacacaggcatgaatgct
gtgattgcctacagtatcattaagagaaaaggtggagagactgaatcatttgacattgac
tccaatactggaaatatcacattaaagagggggctgaataacagaggcctctgcagcctc
ctggttaaggtcagtgatcatggtcagccagagccactcttttccacagtaatggttaat
ttctttgtcaatgaaacagtgagcaatgagagttacatccagagtttgctgaccagagac
gctgacatacagatagaggagaaaccctggttcattggccagatgaccgaggggcctgag
aggtacgagctgttcccctgtcagcctgttgttattgttctctccctgacctgcttggga
ttattcataatggtcgtgactctgatgtcttacattagctgtcagaagctcaagaagcgc
aagaagaaacagatcgaagtagaagtccctttaaaacagaacaatgactccatgcaggtg
gtgaatagaaaaatcaggcagatctcaaacctctga
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