Cynoglossus semilaevis (tongue sole): 103378747
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Entry
103378747 CDS
T04866
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like isoform X2
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103378747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103378747
Membrane trafficking [BR:
csem04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103378747
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_2
Vps39_1
CNH
Clathrin
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
103378747
NCBI-ProteinID:
XP_008308287
LinkDB
All DBs
Position
1:complement(10312215..10321922)
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AA seq
832 aa
AA seq
DB search
MAFKAFVTSHVYSKQDASKERDKFSVQCVEWFDKNLYVGTKHAAVHHLILEGSKSENPSP
DQTKTRECRSRKLGSSNAVVQLRAVPHFNHLLVLWDRSITALNMFSLESVPTMKKIQQVS
LFEVSKSEEGEVLMVTSSSRRKVIHIHLVRVDRWELVKEVALQQDPVALAVDGATLCVAT
CDRYLLCDMETGRSEELFPHHHNKQRIIVSSAGQGEFLMNGPESLGMFVTKAGTCQRPPL
QWSLEVQAARVCFPYVLTLQPHMLFVYSILDQRHKQTVSQHGAKGLLSTPDGVIVFTETD
IFILHPVPVAEQIQALVGEKRVQEALTLLEGVQRHQPLDSYKELQKAVTCLAGFAHFYQQ
DFSEAKDLFIKGDLDPREILLLYPDLRQCLSEDFQSQLHQHPKDQDLQLLWAEDTNTYTH
YLNFLRDFLLAVRGTEQDLRCTAEVDCALLRLYTELRDTERLRELVSLPNECRLDYCVPV
LEQQHRFFALGCLYQSHGKQMEALETWMKIVDGLDEDPSCSDVYGHIIVTLSELKDKGTV
WKCADWTLQKNPEIAVRIFTRRLPRDLLETQDVLTFLEKYLVALILYLEFLINDLCSEEE
SHHNRLALAYVTQTLQKEEEEDLNPTIGKLQHLLWESEFYDISTVYEAVKSTALHSVKAI
LLGRLGKHSQALQVLVHQEQNLQAALVYCHRASRDQEPQFKQALMMDLLQIYLDSEELIN
NAVDLLNDNPQAFTAQTVIQLLPDSWSVQLLSRFLVRSVRTTVHQRRMVKLQKMLVQAEL
RRHKVAWMQASKMKFSLGKEQACKVCQTVIAEPAFACNSHGDIVHISCSGMI
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcttttaaggctttcgtaacatcacatgtctattccaaacaagacgcctcaaaagaa
agggataaattcagcgtccagtgtgtcgagtggttcgataaaaatctgtacgtagggaca
aaacatgcagcggtccaccatctcattctcgaaggcagcaaaagtgaaaatccgagtcct
gaccagacaaagaccagagagtgtcgctccagaaaactgggatccagcaacgcagtggtc
cagcttcgagcagtcccacatttcaaccatttgctggttctctgggaccgaagcatcact
gcactgaacatgttctccctggagtctgtccccaccatgaagaaaatccagcaggtgtcg
ctgtttgaggtgagcaaaagtgaagaaggagaagttttgatggtgacctcctctagccgc
aggaaggtgattcacatccacctggtgagagtggacaggtgggagctggtaaaggaagtg
gctctccagcaggatcctgtggctctggcagtagatggcgccactctgtgtgtggccacc
tgtgacaggtatctcctctgtgatatggagaccgggagaagtgaggagctgtttcctcac
catcacaacaaacaacgcatcattgtttcctcagctggacaaggggagtttttaatgaac
ggaccggagtcgttgggcatgtttgtaacgaaggcagggacgtgtcagcgtcctccgctg
cagtggtctctagaggtccaggcagccagagtgtgtttcccttacgtcctcactttgcag
ccacacatgttgtttgtttacagcatattagatcagcggcacaaacagactgtgagtcag
catggagccaagggtttgctctcaacaccagacggtgtcatagtgttcacagaaacagac
attttcattcttcacccggtgcctgtagcagagcagatccaagcactggtgggagagaag
cgagtccaggaggcgttaacgctgctggaaggagttcaacgtcatcaaccacttgactcg
tacaaggagctgcagaaggccgtcacctgtctcgctggatttgctcacttttaccagcag
gatttttccgaggccaaagatttattcataaaaggcgaccttgatcccagagaaatcctc
ctcctctaccctgacctgagacagtgtctcagcgaagactttcagtcccagcttcatcaa
caccccaaagaccaagatctgcagctgctctgggcagaagacacaaacacatacactcat
tacttaaacttcctgagagattttctcctcgctgtcagaggcacagagcaggacctgagg
tgcactgcagaggtggactgcgccctcctgaggctgtacacggaactgagggacactgag
cgtctgcgggagttggtttcacttcccaatgagtgcagactggactactgtgttcctgtt
ctggaacaacagcacagattctttgctctgggatgtctttatcaaagtcatgggaaacaa
atggaggcactcgagacctggatgaagattgtagatgggttagacgaagacccctcttgt
tcagatgtatatggtcacatcatcgtcacactcagtgaactgaaagacaaagggactgtg
tggaagtgtgcagactggactctgcagaaaaatccagagattgcagtacggatcttcacc
aggcgtctgccacgtgatttattggagacacaagacgtcctgactttcttggagaaatac
ctagtggcgttaattttgtatctcgagttcctaataaatgatttgtgcagcgaggaggaa
agccatcacaaccgtctggccctggcatatgttactcagacgctgcagaaggaagaggaa
gaagatttgaaccccaccatagggaagttacagcatctgctgtgggaatctgaattctac
gacatttccacagtgtacgaggcagtgaagtcaacagccctgcacagtgtgaaagccatt
ctccttggaaggcttgggaaacattctcaggctctgcaggtgctcgtacaccaggagcag
aaccttcaggctgctctggtgtactgccacagagcttccagagaccaggagcctcagttc
aaacaggccctgatgatggacctgctccaaatctatctggactctgaggaactaatcaac
aatgcggtcgatcttctgaatgacaaccctcaggccttcactgctcagacagtcatccag
ctgctgccggactcctggtccgttcagctcctctctcggttcttagtcagatctgtgagg
acaactgtccaccagaggaggatggtgaagctacagaagatgctggtccaggcagaactc
cggcggcacaaggtcgcttggatgcaggcctcaaaaatgaaattcagcctgggcaaggaa
caggcatgtaaggtctgtcagacggtcatcgcagagccagcgtttgcatgtaattctcat
ggtgatattgtgcacattagctgctcaggaatgatttaa
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