Cynoglossus semilaevis (tongue sole): 103378885
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Entry
103378885 CDS
T04866
Name
(RefSeq) stereocilin-like
KO
K24636
stereocilin
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csem03037
]
103378885
Cilium and associated proteins [BR:
csem03037
]
Other cilia and associated proteins
Stereociliary proteins
103378885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Stereocilin
ANTAR
Motif
Other DBs
NCBI-GeneID:
103378885
NCBI-ProteinID:
XP_016888098
LinkDB
All DBs
Position
5:7484144..7503083
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AA seq
1948 aa
AA seq
DB search
MATFTFTTLIVCAVLLGPGCPEKTGDGNRDQRNAFLKEILSKWSKGDAPQKDPEETSRDQ
LVHPWVRNIMGSLKSLGLFPSTSLPSLNKPIDRHRLSGFLYNISLYLQEMGAELEEAPTE
PDEEQLWEKVLQFLLQPKGNGAANQWNGRVPPRPSLKVQDWFLSLRGSPHWDWLLGLLQS
LITLSERQPHRPLMTLLSQNWRTVSAVLEAGLQALVSGTYGQASAGLQGFICALKGQSDC
TFNVSWLQQLLRLVESRNWKPVVSVHPVGQGAAHSKDSGAFGRVKPFSMLPEAMRQDGIK
NTSLEEGVESTDDPDFVQNLLLDALSRSGVGGERGGYVAQRNMALVQSLDGLRRGLLHRV
GSSVYSNLRQKVSQVTMAMLDDVSSLVDVPQSSGQGRCSEGDLRRLILWGIRHNLTWNTQ
ALGISTQGLPNSLPFLSCPSTEGHQQGSQRTKAKASSRAAHPSPTRSKQNRLLLPHFSLP
QMERADQNQVKDLDFFTTSEILEAACNESIPGLTGVSNFTVFLYCKLFEGENQSVRPAGG
QMGLDLHATCSDAAWYLSAAEDDFLWLHVCSEFFAHEFNNTVCANSSFWLQKAQQAAVTK
DYSFFNQTNIDDLCVHLSEEASGSLGLDESCLAQVGSGLLTAQVLRHCFLPNSSVLISSL
CSSYSVDSHRSLSEPSWVAAYCSKLLNASDSDSTEEMCRYREWAVDSFTNTTLLEHCEQT
PGLKEYMCANATVYGGLLRQPQFAEFCADLQAEHEDKKCFLQRFFDMLPARYDFDTSQLC
VDPAPLLVDVLHKLSVCEVEGGRRESFLLSLGYVLRVLDFMVGLSSGLDEGEREARQGLG
QAILLSSLLDNTSWSSLQPKASMSVLQTVGVFLRGEQNTTLKEDLLGCFSPLLWDLIQRD
NNSSALRVLMQEYLQMPRDTIRTLVMSAEKDAVKRFLSHMHQSWDQLQVEPSQASRQEVE
AMETMTAAFIHKFPRVTPELFVDLSQFIPFMSVSDIMSFPASLIVNDTVLTAIRDHSSGM
KSLQKRAFVKRLLQSNVVGDVETWPPYFLGSILPLLPFLPVSRFQQLTSQQLTPLVELLG
NSSLDAVRGRHVLRTVFVKKRNLTSDYLSRLGVLACYLDPADLGRYLQESSVSSALWQQL
AQCMSKGFISSSGRLSSWLIPAVKTVNISSLSPPSLPGLQGLTDLLPQLGSPVLLSLPSQ
QMMELLSQPGLHRYPPAQAFQMLSKLSQDTTLSVETLCRLKSLHSGVSPTLIRDLQWPEV
TEQLHCQCWTMLLTGLNPGCRAALYDTVLEVLTRDLQNLTHPGHCVLPFVPLKKLTDTVD
GGTILGHIDFYRDTRWSPQQAQLLFRKVSGSKNLTSSSVQALGQIAGGMTCDLFKLWAND
TEFSELLHLVTDLSGAIRPAMRKCIIEELRSRPDLDLTLLNPRFAASLPLTMMESLSNSS
FRAVLDQVQADFAEFLKLPHYKQTNLAEKARAELALYGCPQADGEVDSTTVDVLGPLVPF
LDRDSLSLVDRGALGLRLEEMRSFCLPREALRDISALLTHKDMLGAPSKWQVEDVEHLGR
LVFSLSPKQISSIPSVVLNKDTVEQVLVGQRRWEDTAVGSVCVRQCTDQNQQRLRTQSLL
RGIVKTQSRRARAPVPSCADIRGTFPSAWTPTQFSRMSEEDLDQCVEVLGQDSSLNSQQR
RSLWVKLRQSFSPVRDLRPEQILALGSVVTEMGERELQDVDLSDPVVLTHLGTLTDWSPK
KMRAVVLGVMRRRKLRVEHLTMVDMVTFGHLICGLYPSELKRLNPYNLSVAVFFFREMSL
PCTEKQMEALTSRLFRPEAFGPVSAWGPEVFTEIGTLAVGLEDIVLSALVQEQVEGLTPP
AISLMSPEKISVVFSPAQLSWLTMEQAWAVTEEQWTELDPEQRHAVGLARYDGDALEMRG
RNTAPAAPHADSWAVQSLALCLLLYKVI
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atggccaccttcactttcacaaccttaattgtttgtgctgttttactgggacctggatgc
cccgagaaaacaggtgatgggaatcgagaccaaagaaatgcctttctgaaggaaatcctg
tcaaaatggagcaaaggagacgctcctcaaaaggatcctgaagaaacaagtcgggatcag
ttagtgcacccgtgggtgaggaatatcatggggagtctgaagtcgttgggtctgttcccc
agcaccagcctcccttcactgaacaagccaatcgacagacacagactctcgggctttctc
tacaacatctcactttatctccaagagatgggagcggagctggaggaggcgccaaccgag
ccggatgaggagcagctgtgggagaaggtgctgcagttccttctccagccaaaggggaac
ggcgcagcgaaccagtggaacggccgggtacctccccggccaagcctcaaagtacaggac
tggttcctgtccctcagggggagccctcactgggactggctgctggggctgctccagagt
ctgatcacgttgtctgaacgtcagcctcacagacccctcatgactctgttgtctcagaac
tggagaactgtgagcgccgtgctggaggctggacttcaagccttggtgagtgggacctac
ggccaggccagtgctggtctgcagggcttcatttgtgccctgaagggccaaagcgactgt
accttcaacgttagctggctccagcagctgctgcggttggtagaatcacgcaactggaag
cccgtggttagcgtgcaccctgtaggacaaggagctgctcacagtaaggactccggtgcg
tttggacgtgtgaagcccttcagtatgctgcctgaggccatgaggcaggatgggataaag
aacacgtctttggaagagggagtggaatctacagatgatccggactttgtgcaaaatcta
ctgttggacgcgttatctcggtcaggagtgggaggagagcgtggcggctacgtggcccag
agaaacatggccctggtgcagagtttggatggactacggaggggcctcctgcacagggtt
gggagctctgtgtacagtaaccttagacagaaagtttcgcaagttaccatggcgatgctt
gatgatgtcagcagcctggtggatgtaccacagtccagtggtcagggccgatgctcagag
ggcgacctgaggaggcttatcctatgggggataagacacaacctgacatggaacactcag
gccttagggattagcactcagggtctcccaaactccttaccattcctgtcctgcccgtcc
actgagggacaccagcaggggtcgcagcgaacaaaggccaaggcatcttcaagggcggcc
catccttcaccaacaaggtccaaacagaatcgtctcctcctgcctcacttctctctgcca
cagatggagagagcggaccagaaccaggtcaaggacctggacttcttcaccacgtcagaa
atcctggaagcagcatgtaacgaatccatcccaggcctgacaggtgtgtccaacttcacc
gtcttcctctactgcaaactctttgaaggggagaaccagtcggtccgtcctgcgggggga
cagatgggactcgacctgcacgccacctgctctgacgcagcctggtacctgtcagcagcg
gaggacgacttcctgtggctccacgtctgcagtgaattctttgcacatgaatttaacaac
acggtttgtgccaactcctccttctggctgcagaaagcacagcaggctgcagtgactaag
gactacagtttttttaaccagaccaacatagacgacctgtgtgttcacctgtcagaggaa
gcctcaggatctctgggccttgatgagagctgtttggcccaggtgggcagcgggttgctc
acagctcaggtattaagacactgcttcctgccaaacagctcggtcctcatctcctctttg
tgcagcagttactccgtcgactcccacagatcgctgtcagagcccagctgggtcgcagcc
tactgctccaaactgctcaacgcctccgattctgacagcacagaggagatgtgtcgctac
cgggagtgggctgtggattctttcaccaacaccactctactagaacactgtgagcagacg
cctgggctcaaagagtacatgtgtgcgaacgccaccgtgtacggtgggctgctccggcag
cctcagtttgcagagttctgtgctgacttgcaggcagaacacgaggacaagaagtgcttc
ctgcagaggttcttcgacatgcttcctgcgcgctacgactttgatacgtcgcagctctgt
gtggacccggctccgctgctggtggatgttcttcacaaactcagcgtctgtgaggtggag
ggggggcggcgggagagttttctattgtcactggggtacgttctgcgagtgctggacttc
atggtgggtctctcctcggggctggatgaaggggagagagaggcgaggcaaggtttgggt
caggccatcctcctctccagtctccttgacaacacatcctggtcctcgctgcagcccaag
gcctccatgagcgtccttcaaaccgtgggggtcttcctgcgaggagagcagaacaccact
ctgaaagaagacctgctgggatgtttcagtccgctcttgtgggacctcatacagcgagac
aacaactcctctgccctcagagtcctgatgcaggaataccttcaaatgccaagagacacc
attcggactctggtcatgtcggctgaaaaagatgcagtgaagagatttctctctcacatg
catcaaagttgggaccagctgcaggtggaaccgagccaggcttcccgacaagaggtcgaa
gccatggaaaccatgaccgctgcgttcatccataaattcccacgagtgactccggaatta
tttgtagacctgtctcagttcatacccttcatgtctgtctccgatatcatgagtttccca
gcatccctgattgtcaacgacactgtactgaccgccatccgggaccacagctccgggatg
aagtcgctgcagaaacgggcttttgtgaagcgactcctccagtccaatgtggtgggtgat
gtggagacctggccgccctacttcctgggctccatcctccctctcctgccattcctgcct
gtcagtcgttttcagcaactgacatcacaacagctcactcctctggtggagttgttgggc
aacagcagtctggatgctgtaagggggcgccacgttctccgtacggtcttcgttaagaag
aggaatctgaccagtgattacctgtccaggttaggagtcctggcctgttacctggaccca
gcagacctgggtcggtacctgcaggagtcgtccgtgtcctctgctctgtggcagcagctg
gctcagtgtatgtcaaagggcttcatcagttccagtggtcgattgtcgtcatggttgata
ccagcagtgaagactgtcaacatcagcagcttgtctcctccatcactgcctggtctccag
ggcctcactgatctgctgccgcagctgggatctccagtcctgctgtctctgccgtcacag
cagatgatggaactcctctcacaaccaggtttacacagataccctccagcacaggcattt
caaatgttatccaaactctcccaggacaccactctcagtgtggagactctgtgcagactg
aagtcgttacactctggcgtctcccccactctgatcagagacctgcagtggcctgaggtc
acggagcagcttcactgtcagtgctggaccatgttgttgactggactgaaccctggctgt
agagccgcgctgtatgacacggtgctggaggttctgaccagagatctgcagaacctcact
catcctggacactgtgttctaccatttgttcctctgaagaagctgacagacaccgtggat
gggggaacaattctgggacacattgacttctaccgggacacccggtggtcaccgcagcag
gctcagcttctgttcagaaaagtctctggatccaaaaacctgaccagcagctcagtacag
gctctgggtcaaattgctggtggaatgacctgtgaccttttcaagctctgggccaacgat
acagaattttcagagctgcttcacctggtgaccgatctgtctggagccattagaccggcc
atgaggaaatgtatcatagaggagctgaggagccgccctgacctggacctgactcttcta
aaccccaggttcgctgcatcactgcccctgacaatgatggagagcctcagtaattcatcc
ttccgggccgttctggaccaggtccaggcagactttgctgaattcctcaaactgccacat
tacaagcagacaaatttagctgaaaaggccagagcggagctggctctgtatggttgtcct
caggcagacggggaggtggacagcactaccgtggacgtcctcgggcctctagtgccgttc
ttggaccgggacagtttgtctctggtggacagaggagctctgggtctgcggctggaggag
atgaggagtttctgcctcccgagggaggctctgagagacatcagcgccctgctcactcac
aaagacatgctgggggctccgtctaaatggcaggttgaagacgtggaacatctgggaagg
ctggtgttttctctctcaccgaagcagatcagctccatcccttcagtggtgctgaacaag
gacacagtggagcaggtcctggtgggtcaaagacgctgggaggacaccgcggtgggcagc
gtctgtgtccgtcagtgcaccgaccagaatcagcagagactacggacccagagtctcctc
cgtgggattgtcaaaacccagagcaggagagccagagcaccagttccaagctgtgcagat
atcagaggaactttcccttcggcctggacccccactcagttcagtcgtatgtcagaggag
gatctggaccagtgtgtggaggtcctgggtcaggactcttctctgaactcccagcagcgc
cgctcactgtgggtgaaactcagacagtccttcagtccagtcagagacctgagaccagag
cagatcttggcgttgggctccgtggtgacagagatgggagaaagagagctgcaggatgtt
gatctcagcgacccagtcgtactgacacatctgggaacactgacggactggagccctaaa
aagatgagagctgtggttctgggcgtgatgcggagacgcaaactgagagtagaacactta
acgatggtggacatggtgacctttggtcatctgatctgtggtctgtatccgtctgagctg
aagagactgaacccctacaacctcagcgtggctgtcttcttcttcagagaaatgtctctg
ccgtgcacagagaagcagatggaggcgctgacgagtcgtttgttcagaccagaggccttt
ggacccgtcagtgcttggggaccggaggttttcactgagattggaacactggccgtgggc
ctggaggatatagtgctgtcagctctggtccaagaacaagtggaaggcctcacccccccg
gccatctccctgatgtcacccgagaaaatatcagtggtgttcagtccagcccagttgtca
tggctgaccatggagcaggcctgggctgtaactgaagagcagtggaccgagctggaccct
gagcagagacacgccgtgggattggctcgatacgatggagacgctctggagatgagagga
agaaacacggccccggcagccccacatgccgatagttgggctgtccaatcactggctctg
tgcctgctgttgtacaaagtaatttaa
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