Cynoglossus semilaevis (tongue sole): 103379044
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Entry
103379044 CDS
T04866
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csem03036
]
103379044 (chd9)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103379044 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
Motif
Other DBs
NCBI-GeneID:
103379044
NCBI-ProteinID:
XP_008308677
LinkDB
All DBs
Position
5:10756180..10818393
Genome browser
AA seq
3035 aa
AA seq
DB search
MDFFDDPSLFGGGLEGLGEDGFPSAQSLVDELNLSSDYGPLQMEPLGSGKHQGIMPQVSA
QQIPTYSQQMGHYTSIKAQSHTEHAFSEHGVTGGSIMPEHRGQYHNASVSQVPSSNGGFC
SSPMWSNQEQNGNRYHPMSHQQQHLQQQLCHLPSPQHIPQANVRQQHLRQQQHHPYHQQQ
QQQQQHSMRQQLQQQSHQHQLINQHQPQHLNAQTISLHQQQHHNFSPHKGSRPESQQQIH
YGRQEVQHHLTAGGPRLQSGVLPSRPYLDNHNTSLGGICSQPYQQQHANYHMAAGSQAFP
GSGLEDPNLPFPMHSSSMVSSLPTCSVSSATPYQPTQYPAYPGEPEIPSLDPQSLSSTSL
SGCISTNSVPQASTVPDPFGCQFSSKRIMNQQHTRIAVGQADCPFQAVHCSGETQEKSRP
VEMFGKSMSCYPNMTNQLSTEQSQSHGVINSNRYQDLKDSLLTSEAQDGGFEGLEPPDLL
PDLLPQLEAALKQESESSCSWACSMERGDDAKKPTPFECKDEKPRKNTNGPGCQVRALSP
LVKSSSSSSSSSSPSSSSSSSSSSEKRAQQRTHHQMETSPLGKQEKANRIISEAIAKAQQ
RGEKNIPRVMSPESFPGSSSQYKSHRDREHKGNGKARSKQKACRKAHIVPSSKSKQKSKI
GKIVIKIGKKKKRKHESSDEVSSDDDPPPRHSSKDDSKRRSNRQVKRKKYAEELEARLSD
EDVKVIVKAKKTNAPASKGPGVQLFVENPSEEDGAVVDKIMSSRIVKKEVSPGVVVEVEE
FFVKYKNYSYLHCEWATEQQLEKDKRIQQKIKRFKMKQAQRAHFFADMDEEPFNPDYVEV
DRVLEVSYCEDKGEEVVYYLVKWCSLPYEDSTWELKDDVDQSKIEEFEQLQAVKPDSRRV
ERPPANLWKKREQSRAYRNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSIT
FLEEIYRVGIKGPFLIIAPLSTIANWEREFHTWTHLNVIVYHGSMISRQMLQQYEMYFRD
AHGHAMRGAYKFQAVITTFEMILGGCPELNAIQWRCVIIDEAHRLKNKNCKLLEGFKLMS
LEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGELKTEEQVQKLQGILKPM
MLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQANMPNLVNTM
MELRKCCNHPYLIKGAEEKILEDFREVYSPTASDFHLQAMVQSAGKLVLIDKLLPKMKAG
GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC
TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQDKAVKVYRLITRNSYEREMF
DRASLKLGLDKAVLQSMSGRDNSLGGGGGGGTGGGAAQQQLSKKEIEDLLRRGAYGAIMD
EEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKW
AKKADIDMEMVNGRNSLVIDTPRVRKQTRPFSATKDELAELSEGGSESDDGKPKVRRNND
RLNSYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTEWDVESICRALLSYCLVHYRG
DDKIKSFMWDLIAPAEDGRTKELQNHLGLSAPVPRGRKGKKMKTQSSSFDIHKAEWLRKH
NPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGNQAQKVLDGADSNEVKIWVPSP
DHSELPALWWDAIADKCLLLGIFKHGYEKYNTIRADPKLCFLERVGRPDEKAIAAEQRSN
DFMDGDVDDPEYKPAPALLKEDMEDDVSSPGDLVVADNTADPVPLLEGQTSYWPSSSVLT
ARLRRLITASQRYTKSRQILNIHQAQSLTQSMSQSQQAMMLSAPLCPLPPTLDNNLNPKM
AAKFERQQRWTRREEADFYRVVSTFGVVFDPTLGQFDWTKFRAMARLHKKTDESLQKYLC
AFTAMCRRVCRLPPKEGDSAVDQSLTIQPITEERASRTLYRIELLRQVREQVLPHSFLYE
RLPLCQMSSDLPVWWEAGNHDRDLLIGAAKHGVSRTDYHILRDPELCFMSAQRNYSQTKA
VQQQSGTSNPILHPQHQAASSVLTGSPMHQTGQRESVPFGLVAKVEPASEGEESSNKQGE
GWSPPKAPATPTGLEEKPVVETMDSERQMVAARTKPLTPNSSDRKPKKSSKRGRRETRRG
SESNSDGSSSSSSSRSSSSSSSSSSSSHSGSSSSSSSSSCSSGSSSSSSSSSSSDDSDSD
GEERKKKVPAPTSMKGFDEDSVASLSTTQDETQDAQVAENGVAFNSSHPFQGGRYMLAAS
YWPKDRVIINRLDSICQAVLKGKWPETRRVYEPGGAVASFYTTKLLDSANSLCEDPSASP
QGSKVTKHVAENKEFSVKLNDQEGGLKLTFQKQGLPLKRPLESEEGPHAQQQYLARLHEL
QSASDTGLTDITKPQNSFQTVPAVLPGQMRLNGVLEGQPLVKKRRGRKKNVEGVDLLFMN
KSKGPSFADHVPPGWGGIGQVGMAMASASGYDQTSGQVSADTETRVPVISLKDGTRLAGD
DAPKRKDLELWLNEHPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNS
LTGEERVQIINRRNARKIGGAFAPALKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMF
DRILTGPIVPEEVSRRGRRPKNPMAKAAAAAAAGAATGAATGAGATNTAATALSLNPLLA
NGLLPGMDLTSLQAFQQNLQSLQSLQLTAGLMGLPPDASNLAASNLAAMFPMMLSGMTGL
PNLLGMSSMLGKSASEDTGGSAQKTKGTSSVATAEASASTTSPLTSDTKGERTDSSNTTP
SSASSSSSSSTAPQSASAASAASSHPLSLNPLLLSSMLYPGMLLTPGLNVPVTSTQLQSS
NSDPNPPSARLPPPSSASKSSFLEMEKPTAEGDKEEEEVESEAVEEGLEEDEDEEDSAEQ
KENSGGEGSGKAETSSSESGSSSSSSDDSDSSDED
NT seq
9108 nt
NT seq
+upstream
nt +downstream
nt
atggacttttttgatgaccccagtctctttggaggaggcttggaaggacttggtgaggat
ggttttccctctgcacagtcacttgtggatgagctaaacctcagttctgactatggtcca
ctccaaatggagcctctgggctcaggaaagcaccaaggcataatgccacaagtttcagcc
caacaaattcccacatacagtcaacagatgggtcactatacaagcatcaaagcacagagt
catacagagcatgccttctctgagcatggtgtcacaggtggtagcataatgccagagcat
cgtggccagtaccacaatgcctctgttagtcaagtcccttcatccaatggagggttctgt
agcagtcctatgtggagcaaccaagagcagaatgggaatagatatcaccccatgtctcat
cagcaacaacatctccaacaacagctttgtcatctgccatcgccacagcacatcccacaa
gctaatgtcagacagcaacatttgcggcagcagcaacaccatccctatcatcaacaacag
cagcagcagcagcaacatagtatgcgacagcagctgcaacagcaaagtcatcagcatcag
ctgataaaccagcatcagccccaacacttgaatgcacagacaatatccctgcatcaacag
cagcatcataatttttcccctcacaagggaagtcgccctgaaagccaacaacaaattcac
tatggtcggcaggaggttcaacaccacctgacagcaggagggccaaggctacagtcagga
gttttgccaagcaggccttacctggataaccacaacacgtctctaggtggcatttgctca
cagccatatcagcagcagcatgctaactaccacatggccgcagggagtcaagccttcccc
ggatcagggctggaagaccctaacctgcccttcccgatgcattcatcatctatggtttcc
tccctgccaacatgctcagtaagttcagccactccttaccaaccaactcagtaccctgcc
tacccaggagagcctgaaataccaagtctggatccacagtctctgtcgtcaacctcactg
tctggttgtatctccaccaactctgtacctcaagcttccacagtgcctgatccatttgga
tgtcaattttcatccaaaagaattatgaatcagcagcacactaggatagcagtaggccag
gccgactgtccattccaggcagtacattgttctggagaaacccaggaaaaaagcaggcca
gttgagatgtttggtaaatccatgagctgctaccctaacatgaccaaccagctatccact
gagcaatctcaaagccatggggtcatcaacagcaacagataccaggatttgaaagacagt
cttctgacatcagaggctcaagatggaggcttcgagggactggaacctcctgacttattg
cctgacctgctgcctcagcttgaggcagctcttaaacaagagagtgaatccagttgttcc
tgggcctgttccatggagagaggagatgatgccaaaaagcctacaccttttgaatgtaaa
gacgaaaagccgagaaagaacactaatggtcctggctgccaggtacgggccctaagtccc
ctggtgaagagcagctcgtcgtcttcctcctcgtcgtcgccatcatcttcttcatcaagc
tcctcctcctctgagaaaagggcacagcagaggacgcaccatcagatggagacatcacca
ttgggcaaacaggagaaggccaacaggataatatcagaggctattgcaaaggcacagcag
cgtggagagaagaatattcccagagtcatgagccctgagagcttccctggttcctcctcc
cagtacaagtcccaccgagatcgagagcacaaaggaaatggcaaggcccggtccaaacag
aaggcctgtaggaaggcccacattgtaccatcttccaagtccaagcagaaatccaagatt
ggcaaaattgtcatcaagattggaaagaagaaaaagcgaaagcacgagtcttcagatgaa
gtgtcatcagatgacgaccctccacctcggcactcttcaaaagatgattcgaagagaaga
tctaatcgacaggtgaaaagaaaaaagtacgccgaagagctggaggccaggttatcagat
gaggacgtcaaggttatcgtcaaggccaagaaaaccaacgctccagcatccaagggccct
ggtgtacaactttttgtagaaaatcccagtgaagaagatggtgctgtagttgacaaaatc
atgtcttctcgcattgttaagaaggaggtgtctccaggtgttgtagtggaagtggaagag
tttttcgtaaaatacaaaaactactcctacctacactgtgagtgggccacagagcagcag
ctggagaaggacaagaggatccagcagaagatcaaacgcttcaagatgaaacaagcacag
cgggcacacttctttgcagatatggacgaggagccctttaaccctgactatgtagaggta
gacagagtgctcgaggtgtcgtactgtgaggacaaaggagaggaggtggtgtattacctg
gtaaaatggtgttctctgccgtacgaggacagcacctgggagttaaaggacgacgtagat
cagagcaagattgaagagtttgagcagctgcaggcagtcaagccagactcacgcagggtg
gagcgccccccagcaaatctatggaagaagagggagcagtcaagggcatacaggaatggt
aacagcctcagggactaccagctggagggagtcaactggcttctctttaactggtacaac
agacgtaactgcatcctcgcagacgagatgggcctgggaaagaccatacagtccatcacg
ttcctggaggagatctatcgtgtgggcataaaagggccctttctcatcattgccccactt
tccacaattgccaactgggagcgagagttccacacttggacccaccttaatgtgatcgtc
tatcatgggagtatgatcagcaggcagatgctgcagcagtacgaaatgtacttcagggat
gcacatggacatgcaatgcgaggtgcctacaagttccaggctgtcattacaacatttgag
atgatcctggggggttgtccagagctcaacgccatacagtggcgctgtgttatcattgac
gaggcccacagactgaagaacaagaactgcaagctgctggagggcttcaagcttatgagc
ctggagcacaaggtcctgctgacaggcactcctctccagaacactgtggaggaactcttt
agcctgctgcacttcctggagcctgcacgcttcccctcagaaaataccttcatgcaggaa
tttggagaactcaagactgaagaacaggtgcagaagctgcagggtatcctgaagcccatg
atgctgcgtcggctgaaggaggatgtggagaaaaagttggctcctaaagaagaaaccatc
attgaagtggagctcactaacattcaaaagaaatactaccgcgccatcttagagaagaac
ttctccttcctgtctaaaggagctggacaggcgaatatgcctaacctggtcaacactatg
atggagctgcgaaagtgctgcaaccacccctacctcatcaaaggggcagaagagaagatc
cttgaggacttcagggaagtctatagccccactgccagtgactttcacctgcaggccatg
gtgcagtctgctggaaaactagtccttattgacaaactgttgccgaagatgaaggctggg
ggtcataaggtgctcatcttctcccaaatggtgcgctgcctggacattttggaagactac
ctcattcagagaaggtatttgtatgaacggatagatggacgtgttcgtggaaatctgcga
caggcggccatcgaccgcttcagcaagcctgactcagaccgctttgttttcctactgtgt
acaagagctggaggcctgggaattaatctcacggcagcagacacctgtatcatctttgac
tctgactggaacccacagaacgacctgcaggcccaggctcgctgccatcgtatcggtcag
gacaaagcagtgaaggtttaccgtctgatcacaagaaactcttatgagcgggaaatgttt
gatcgagccagtctgaagctgggcctggacaaagcagtgttgcagagcatgagtggccga
gataacagccttggaggaggaggaggaggaggcaccggtggaggggcagcgcagcagcag
ctgtctaagaaggagattgaggatctattgcgacgtggtgcttatggtgccatcatggat
gaggaggatgaaggagcgaaattctgcgaagaggacatcgaccagattcttcagcgcagg
acaaaaactatcaccattgagtctgagggacgaggctccacctttgcaaaggccagtttt
gtggcatctggaaaccgcacagacatttctctggatgacccaaatttctgggacaagtgg
gccaagaaagcagacattgacatggaaatggtgaatggcaggaacagtttggtcattgac
actcctcgtgtccgaaagcagaccaggccattcagtgccaccaaggatgaactggcagag
ctttcagagggcggaagcgagagtgatgatggcaaacctaaggtccggcgaaacaatgac
cgcctcaatagctatggacggacagagtgcttcagagtagagaagaacctgcttgtatat
gggtggggtcgttggaaggacatccttaatcacgggcgttttaagaagcagttgacagag
tgggatgtggagtccatctgcagggcactgttgtcctactgcttggtacattaccgcgga
gatgacaagatcaagagcttcatgtgggacctcattgcccctgctgaggacggtcgtaca
aaagagctacagaatcacttaggtttatctgccccagtgccccggggcagaaagggtaaa
aagatgaagacgcagtcgagctcttttgacatccacaaagctgagtggctcaggaaacac
aacccagagcacatgctgcaggatgacggctacaagaaacacctcaaacaccactgcaac
aaggtgctgctcagggtcagaatgctctactacctgaaacaagaggtgattggaaaccag
gcccagaaagtactggatggtgcagactccaatgaggtcaagatctgggtcccatctcct
gaccattcagagctgcccgccttgtggtgggatgccatcgctgacaagtgtcttctgttg
ggtatatttaaacatggttatgagaagtacaacactattcgtgcagaccccaaactgtgc
ttcctagagcgtgtgggtcgacctgatgagaaggccatcgctgccgaacaaaggagcaac
gatttcatggatggggatgtggatgatccagaatacaagcctgctccagctctgctgaaa
gaagacatggaggatgatgtctcttctccaggagatttggttgttgccgacaacactgca
gatcctgtgccattgctggaaggtcaaacttcctactggccctcatcctcagtgttgaca
gctcgactgaggcgtttaatcactgcctcccagcgctacaccaagagccggcagatcctc
aacatccaccaggctcagtcactgacccagtccatgtctcagtcccagcaggcaatgatg
ctgtctgcccctctgtgcccactgcctcctacacttgacaacaacctcaacccaaaaatg
gctgcaaagtttgaaaggcagcaaagatggaccaggcgggaagaagctgacttctatcgt
gtcgtttccacctttggtgttgtttttgaccccacccttggtcagttcgactggaccaag
ttcagggctatggctcggctgcacaagaagactgacgagagtctgcagaaatacctgtgt
gctttcactgccatgtgtcgacgggtgtgtagactgccaccaaaagagggagattctgct
gtggaccaatctctcaccatccagcccatcacagaggagcgagcatcacgtaccctttac
agaatagagctacttcgccaggtgcgggagcaagttctgccacattcatttctctatgag
cgcctgccactgtgccagatgagctcggacttgcctgtgtggtgggaggctggaaaccac
gaccgtgacctgctaattggtgcagccaagcatggcgtaagccgcacagattaccacatt
ctgagagaccctgagctctgcttcatgtctgcccagcgaaactacagccaaacaaaagct
gtacagcagcagtcaggcacatccaacccaatcctccaccctcagcaccaggctgccagc
tcagtgttaacaggctctccgatgcatcaaacaggacagagagagtcagtaccctttggg
cttgtggccaaagtggaaccagcctctgagggggaggagagcagcaataaacaaggtgag
ggttggagtccccctaaagcaccagccactccgacaggtctggaagagaagcctgtggtc
gaaacaatggacagtgagaggcagatggtagcagcacgaaccaaacccctaacgcccaac
tcctcagacaggaaacctaaaaagtccagcaagagaggtcgtagggaaaccagacgtgga
tctgaatccaactctgatggttcctcttcaagctcttcatcacgctcctcttcctcttca
tcatcatcttcttcctcctcacattccggctcaagctcctcttcttcttcttcgtcctgc
tcttcgggatcttcttcgtcatcctcatcatcctcatcttctgatgacagtgacagtgat
ggagaagaaaggaagaagaaagtgcctgcaccaacaagtatgaaggggtttgatgaggac
agtgttgcatcactgagcacaacacaggatgaaacacaagatgctcaggtagctgagaac
ggtgttgcctttaactcctcacatcctttccaaggagggagatacatgctcgctgcttca
tattggcccaaggatcgtgtaattatcaaccgcctggacagcatctgccaagcagtgctt
aagggaaagtggccagaaacacgtcgggtttatgagcccgggggtgcggtggcctcattc
tacaccaccaagctgctggacagtgccaacagcctgtgcgaggacccctctgcttcacca
caggggtcaaaggtgaccaagcatgttgcagaaaacaaggagttctcagtaaaactcaac
gaccaggagggaggtctgaagctgaccttccaaaagcagggtcttccgctgaagaggccc
ctggaatctgaggagggtccccacgcccagcagcagtacctggcccggctccatgagcta
caaagtgcttcggacactggtctcacagatatcaccaagcctcaaaacagctttcagact
gtgccagcagttcttcctggtcagatgaggctaaatggagtactggaaggccaacctctg
gttaaaaagcgtagaggaagaaagaagaatgtcgagggagtagacctgctcttcatgaac
aagagtaaaggtccttcttttgctgatcatgtgcctccaggctggggtggtattgggcag
gtgggcatggctatggcctctgcatcaggctatgaccagacctctggtcaggtctctgca
gatacagagaccagggttcctgtcattagcctcaaagatggcacccggctcgctggggat
gatgctccaaagaggaaagacctagagctgtggctgaatgaacatcctggctttgttgca
gacacaggagcctttattcctggggtaaacaagatgcaaatgcagttccacttccaggac
ggtcgtcccaagcagaagcggcatcgctgcagaaaccctaacaagatagatgtaaacagc
ctgaccggagaggaaagagtccaaattatcaacagaaggaatgcgcgcaagattggtgga
gcgtttgctcccgctctcaaggatctgtgcaggttcttgcaggagaacccagagtacggt
gtccctcctgaatgggctgatgtggtcaaacagtcgggttatctcccagagagtatgttt
gacagaatcttaactggacccatcgttcctgaggaggtgagcaggcgtggacgtcgacct
aagaaccctatggctaaggctgcagctgctgcagcagcaggagcggcaacaggagcggca
acaggagcaggagcaaccaacacggctgccactgcgctcagcctcaacccgctgctggcc
aatggcctccttcctggaatggatctgactagtctgcaggctttccagcaaaacctccag
agtttacagtccctgcagcttacagcaggcctgatggggctgccacccgatgctagcaac
ctggcagcaagcaacctcgctgccatgtttcccatgatgctctctggtatgactggattg
ccaaatctgcttggcatgagcagcatgcttgggaagtctgcttctgaggacacaggagga
tcagcacaaaagacaaagggaaccagcagtgtggcaacagcagaggcgtccgcctctaca
acctcacctctcacctcagacaccaaaggagaaaggactgacagctcaaacacaactcct
tcctcagcttccagctcttcttcctcctcaactgccccacaaagtgcttcagctgcctct
gcagcctccagtcacccactgtctcttaaccctttgttactttccagtatgctttaccca
gggatgcttctcactccaggccttaacgttcctgtgacttccacacagctgcagagctcc
aacagtgaccccaaccctccctctgctcgtcttcctcctccgtcctcagcttccaagtca
tcatttttggagatggagaagccaacagcagagggggataaagaggaggaagaggtggag
agtgaggcggttgaagaggggttggaagaagatgaggacgaggaagattcggcagaacaa
aaggagaacagtggtggagaaggttcagggaaagctgagacctcttcgtcagaatccggg
agctcctcctcctcctcagatgactcagactccagtgacgaggactga
DBGET
integrated database retrieval system
