Cynoglossus semilaevis (tongue sole): 103379148
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Entry
103379148 CDS
T04866
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103379148 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103379148 (cstf3)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103379148 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
DUF2971
Motif
Other DBs
NCBI-GeneID:
103379148
NCBI-ProteinID:
XP_008308829
UniProt:
A0A3P8W9W9
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All DBs
Position
5:13148242..13160823
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AA seq
715 aa
AA seq
DB search
MSTEAAADQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVTQ
FPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLAYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKYEKVH
SIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDLRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEK
SGEIWARFLAFESNIGDLASILKVERRRFAAFKDEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRSKLAALLPETVVTPSTPALKDETDRKPEYPKPDTNQMIPFQPRHLAPPG
LHPVPGGVFPVPPAAVVLMKLLPPPMCFTGPFVQVDELMESFRRCTLPETVDAAVELITG
RQPDAAGEGNGSMENHTVAKSLKRPNADSDEEDDKGAVAPPIHDIYRARQQKRIR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgaagcagccgccgaccaggcagcagagtatatcccggagaaagtgaagaag
gcagaaaagaagttggaagaaaacccgtacgaccttgacgcatggagcattctgattcga
gaagcacagaaccagcccatagataaggcacggaagacatatgagcgacttgtcacgcag
ttcccaagttctggcagattctggaaactattcattgaagcagagatcaaggctaaaaat
tatgacaaggtagaaaagttgtttcagaggtgcctaatgaaagtattacacatcgacctg
tggaaatgctacctggcctatgtccgagagaccaaaggaaagctgcccagttataaagaa
aagatggctcaagcctatgactttgcactggataaaattggaatggaaataatgtcttat
cagatctgggtggactacatcaacttcctcaaaggagttgaagccgtgggctcatacgca
gagaatcagaggataactgcagtaaggagggtctaccagaggggctgcgtgaaccccatg
attaacatcgagcagctgtggcgagattatagcaaatatgaagagggcatcaacatacac
ttggccaaaaagatgatcgaggaccgcagcagagactacatgaacgccaggagagtcgct
aaagagtatgagactgtgatgaagggtttggaccggaacgccccgtcggtaccaccacag
aactccccccaggaggcccagcaggtggacatgtggaagaagtacatccagtgggagaag
agcaacccactgcgcacagaagaccaaacactgatcacaaagagagtaatgtttgcctat
gagcagtgtctacttgtacttggacaccatcctgacatctggtacgaggcagcacagtat
ctggaacagtccagtaaactactggcagagaaaggagacatgaacaattccaagctgttc
agcgatgaagcagcaaacatctacgaacgtgccatcggaactctcctgaagaagaacatg
cttctgtacttttcgtttgccgattacgaagaaagtcgcatgaaatacgagaaagtccac
agcatttacaataagctgttggccatcgaggacattgacccaacactggtctacatccag
tacatgaagttcgccaggagggcagagggcatcaagtcaggtcgcaccatcttcaaaaag
gcccgggaggatctacgcacgcgtcaccatgtgtacgtgacggcagcgctgatggaatac
tactgcagtaaggataaatctgtggccttcaagatctttgagctgggtctgaaaaaatac
ggtgacatcccagagtacattctggcctacatcgattacctctcgcatcttaatgaggac
aacaacactagggttctgtttgaacgtgtcctcacatcaggaagcctgtcgccagaaaag
tcgggagagatctgggccaggttcctggcttttgagagcaacataggagatttagctagt
atcctgaaggtagagcgcaggcgtttcgctgcctttaaggatgagtacgagggcaaagaa
accgcgctgcttgtggatcggtacaaattcatggatctgtacccctgctctgccagtgaa
ctcaaggcccttggatacaaggatgtgtctcgttccaaactagcagctctgctcccagag
acagtggtgacgccgtccacacctgcattgaaagacgaaactgaccgtaaaccagaatac
cccaaacccgacactaatcagatgatcccgttccagccacgacacctcgcccctccaggt
ttacacccggtcccaggtggagttttcccagtcccaccagctgctgttgttctaatgaag
ctgctccctccacccatgtgcttcactgggccttttgtccaagtggatgagctgatggag
tcttttaggagatgcacacttcctgagaccgtggacgctgctgtggaactgatcactggc
agacagcctgacgcagctggagaaggaaatggatccatggagaaccataccgttgccaag
tccctcaagaggccaaacgcagattcagacgaggaggacgacaaaggagctgtggctccg
cccatacacgacatctacagagcacgtcaacagaagaggattcgataa
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