Cynoglossus semilaevis (tongue sole): 103379284
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Entry
103379284 CDS
T04866
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103379284 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csem04147
]
103379284 (copb1)
Membrane trafficking [BR:
csem04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
103379284 (copb1)
Exosome [BR:
csem04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
103379284 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
Motif
Other DBs
NCBI-GeneID:
103379284
NCBI-ProteinID:
XP_008308997
UniProt:
A0A3P8VMZ3
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Position
5:complement(15968688..15975951)
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVSSDSEPPSEVSLKTDLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKDHPTHERVLQDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDSLRPLIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKDDIQNVMTEVR
RSLGEIPIVENEIKKETGEVKPEDEVSAAPAQKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKLALRYVAIVQDKKKQNSFVAEAMLIMVTVLHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRKSLSHMLTIRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNIIDLNEYLQHILKSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKMTI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgcagagaatgtttgttacactctgatcaatgtttcatctgactcagaaccc
ccctctgaagtcagtctgaaaacagatctagaaaaaggggagatcaaggcaaagactgag
gccctgaagaaggtcatcatcatgatccttaatggtgagaagttgccagggctactgatg
accatcatccgctttgtgctgccacttcaggaccacactataaagaagctcctgcttgtg
ttttgggagattgttcccaaaaccactcctgatggcaagctgctgcaggagatgatcctg
gtttgtgatgcctacaggaaggatctgcaacaccctaacgagttcatccgtggctccacc
ctgcgcttcctgtgcaaactgaaggagtctgagttgctggagcccctcatgcccgcaatc
agagcttgtctggagcaccgtcacagctatgtgcgccgaaatgcagtcctggcaatttac
accatctataggaattttgaacaccttattcctgatgcaccagagctgatccacgacttc
cttgttaatgagaaagatgccagctgtaagagaaatgctttcatgatgctgattcatgca
gatcaggatcgagccctggattacctcagcacttgtatcgaccaagtccacacctttggt
gacattcttcagctggtcattgtggagctcatttacaaagtctgccatgctaacccctct
gagcgtgcccggttcatccgctgcatatacaacctgctgcagtcctccagcccagctgtg
aagtatgaagctgctggaactcttgtaacactatcgagtgctcccacagccatcaaggct
gctgcacagtgctacattgatttgatcattaaggagagcgacaacaatgtgaagctgatt
gttctcgatcgcttaattgaactgaaggaccatcccactcatgagcgtgttctccaggac
ctggtgatggacattctgcgtgttctcaccactcctgacctggaagtcagaaagaagacc
ttgcagctggcactggaccttgtctcctcccgtaacgtagaagagctagtgattgttttg
aagaaagaagtgatcaaaacaaacaacgtgacagaacacgaagacactgataagtacagg
cagctgttggtgcgaactctccattcctgcagcgtccgcttccctgacatggcagccaat
gtcatacctgtgctcatggaatttttaagtgacactaatgaggcagctgcagccgatgtg
ctggagtttgtacgagaggctattcagagattcgacagtttgagacccctcatcatcgag
aagatgctggaagtcttccacgctattaaaactgtcaagatttacaggggagctctgtgg
atcctgggagaatactgcagcaccaaagatgacatacagaatgtgatgacagaagtacgc
aggtcactgggagagataccaattgtagaaaatgagataaagaaagagaccggggaggta
aagccagaggatgaagtaagtgcagctccagcccagaaactggtgacagagatgggcacc
tacgtcacacaaagtgctcttagctcctccagaccttcaaaaaaagaggaagacagacct
ccactgagaggcttcctgatggacggggacttctacgtcgcagcttccctggccaccacc
ctaaccaaactggctctgcgctatgttgctattgttcaggacaaaaagaaacaaaattcc
tttgtcgctgaggccatgctgatcatggtcactgtgctacatctgggcaagtcctctctg
cccaaaaagccaattacagacgatgacgtggaccgcatctcgctttgcctgaaggtcctc
tcagagtgctccccccttatgaatgacattttcaacaaagagtgccgcaagtccctgtca
cacatgctgactatcaggctggaggaagagaagctgtcgcagaagaaagagtctgagaag
cgtaatgtcacagtgcaggcagacgaccccatctccttcatgcagctcacagccaaaaat
gaaatgacctctaaagaggaccagttccagctcagcctcctggctgctatgggcaacact
cagaggaaggaagctgctgatccactggcttcaaagctcaacaaggtgactcagctaact
ggtttctcggaccctgtatacgcagaagcctatgttcatgtcaatcagtatgacattgtg
ttggatgtgctggtggtcaaccaaaccagtgacactctccagaactgcacattagagctg
gccacattaggtgatctgaagctggtggagaaaccttctcccctaactctggctcctcac
gattttgcaaacatcaaggctaacgtcaaagtggcttcaactgaaaatggcatcatattt
ggcaacattgtgtacgacgtgtcgggggctgccagcgacagaaactgcgtggtcctcagt
gacatccacattgacattatggactacatccagccagcttcctgcacagatgcagagttc
agacagatgtgggcagagtttgaatgggagaacaaggtgaccgtgaacaccaatatcatt
gatctgaacgaatatcttcagcacatccttaaatccaccaacatgaaatgtctgacgcct
gagaaggcgctgtctggcttctgcggcttcatggctgccaacctttatgctcgttctatc
tttggggaagatgctctggccaatgtcagcatcgagaagcccatccacctgggccccgat
gcaccagtcaatggacacatacgcatcagagccaagagtcaggggatggctttaagccta
ggagacaaaatcaacctttcccagaagaagatgaccatctga
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