Cynoglossus semilaevis (tongue sole): 103379346
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Entry
103379346 CDS
T04866
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103379346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103379346
03036 Chromosome and associated proteins [BR:
csem03036
]
103379346
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103379346
Coactivators
SAGA/TFTC/STAGA complex
103379346
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103379346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
103379346
NCBI-ProteinID:
XP_016888050
LinkDB
All DBs
Position
5:complement(17403316..17472096)
Genome browser
AA seq
1113 aa
AA seq
DB search
MAGASDPLEDMFFSEVDEKAVSDLVGSLESQLAGQSNQAGKTDENGGAGSVAPANHLLGK
TLPAPVGTTTLEQQQGRGNKPEMRQEIKCKEVCPDKSTTPPSLGCTPSFGEPSTTSAPSV
NAAGSGAQSHGASVTTLTAPGVSTLASPAASISTTSSRGSKVSPSSGEASTEANPARKRI
TTPRRSTSARIKSFNGATVTTRRNSNTAVPETVSSPDPSTTPPNSTLPPSSINTSTFTVS
NANLPVGQSAIALDRGTPTISLQRLPSHIVASITQNGNGASVTALVQQGAAAEPSSSPQE
TNSKPVSETGASKTDDCQSKIVMSSQSGSVNSVINAVSSAPAVVTPPPPPQPPPPAPTTT
TTTPSLTPITTTAAATTTTTITQPPSCTTTTVCVTAPVTTTVCGHVTSVATTISLVRPAA
PSPTPAVATSAQSQPRPGLTAPQRIVAPQLIVRPPQQQTTIQLPPGFTIPPGMVLVRTEL
GQLVMVPQQALAQVQAQAQAQAQAQAQAQVQAQVQVQVQAQNSISPRPATPTTGTSFRVT
TPQSPVTSPTTRQCPLTPAKVAPSPSPASSSSVLQTSSSSSSSSSSSASSTSCPAVRPKG
PAAPAIAVTAPQQTPMVMTPQATAQAASQPVQPVQTGIAAAPGASVVSQEMQENVKKCKN
FLATLIKLASHNSPSPETSKNVKALVQDLLDAKIEPEEFTSRLQTELKSSPQPYLVPFLK
KSLPALRLSLLNSQQSLIQPPQQGVKPAPGGVPPAIVTGPGVRIRHPNSVSTTTGATALP
TGTLGHVGAMGVKTAATVGGQVRMPVVITQSVRAQGTIGKGAVIQAGRGAMGMAVQISGN
QKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARILATNSELVGTQIRSCKDEAFLHP
GLLHRRILETAKKFGVTDVPMEAVTFISHATQSRLRTVVEKVSTIAQHRLDSCKDDEYYE
QNADVRSQLRFFEQLERMEKQRKDEQERXIILSAEKPRSRQEDPEQARLKQKAKEMQQQE
LAQMRQRDANLTALAAIGPRKKRKVDSPGATPSGTEVPGSAAGSPASSSVPSTSSRQYTR
QRITRVNLRDLIFYMEQERETTHSLLLYRALLK
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgttcttttcagaggtggatgaaaaagct
gtgagcgacttggtgggctctttggaatcacagcttgctggccagagcaaccaagctggt
aaaacggacgaaaacggaggcgctggctctgtggcccctgctaaccatctattaggaaaa
acgctaccagctccagtgggcaccacaacactagaacaacaacaaggacgtggaaataaa
cccgagatgcgccaggagatcaagtgtaaagaggtttgtccggataaatccaccacccca
ccatctcttggctgtaccccgtcttttggagagccctccaccacttcggctccttctgtc
aacgcagcgggtagcggagctcaatcacatggagcatccgtcacaacactgactgcgcct
ggtgtgtcaactttggcgtcgccggcagccagcatcagcaccacatctagtcgcggctcc
aaggtttctcccagttcaggtgaggcgtcgacagaagctaatccggcccgaaaacgcatc
actacgcctcggaggagcacctcggctcggataaagagttttaacggcgcgacagtgacg
acgcggaggaacagtaacaccgcggtacctgaaaccgttagctccccggatcccagcaca
actccaccaaactcgactcttcccccatcctccattaacacgtcaactttcaccgtatcc
aacgccaatctgccggtgggtcaatcggccatcgctttggacagagggactcccaccatt
tctttgcaaagactcccaagtcacattgtagccagtataacacagaacggcaacggggcc
agtgtcacagccttggttcaacagggagccgccgcggaacccagcagctccccacaggag
acgaacagcaaaccagtctcagagactggagcatccaaaacagacgattgtcagtccaaa
attgtaatgtcaagtcagtctggcagtgtaaactctgtaataaacgctgtttcatctgcg
cctgctgttgtcacaccaccaccaccaccacaaccaccaccaccagcaccaacaacaaca
actacgactccttctctgacccctattaccaccactgctgcagctacaaccaccacaacc
ataacccagcctccgagctgcaccacgaccactgtttgtgtcacagcaccggtaactact
actgtatgtggtcatgttacgtcagtggccaccactattagcctggtcagacccgcagcc
ccttctccgacacctgctgtggccacgtctgcccagtctcaaccccgtcctggacttaca
gcacctcaaaggattgtagccccccagctaattgtaagaccacctcagcagcagactacc
attcaactgccccctgggtttaccatcccacctggaatggttttggttcgaacagagttg
ggtcagctggtcatggttccacagcaggctttggctcaagttcaggctcaggcccaggct
caggcccaggctcaggcccaggcccaggtccaggcccaggtccaggtccaggtccaggcc
cagaacagcatctctcctcgtcctgccacgcccaccacaggaacgtcattcagagtgaca
acgccacagtctccggtgacgtctccgaccacccggcagtgtcctttgaccccggccaag
gtggcaccgtctccttctcctgcctcttccagctctgtcctgcagacctcctcctcttcc
tcttcctcctcttcctcctctgcttcctccacttcctgtcctgcagtccgcccaaaaggc
cccgcggcgccggccatcgctgtgacggctccgcagcagaccccgatggtgatgacgccc
caggccacggcccaggccgcctcccagccagtgcagcccgtgcagacgggcatcgcagcg
gccccgggggcctctgtcgtgtcccaggaaatgcaagagaatgtgaagaagtgcaagaat
tttctggccacactgatcaagttggcgtctcacaattctccgtcccctgaaacctccaag
aatgtcaaagctctggttcaggacctgctggatgctaaaattgaaccggaggagttcacc
agccgactgcagactgagctgaagtcgtctccacagccttacctggtgcccttcctcaag
aaaagcctcccagccttgaggctgtctctgctgaacagtcagcaatccctgattcagcct
ccacaacagggagtcaaaccagcacctggtggcgtccctcctgccattgtgacagggcca
ggcgttcgcatacgacaccccaacagtgtgagcaccacgacgggggccaccgctctgccc
actgggacactgggacacgtgggcgccatgggtgttaagacagcggccactgttggtggc
caggtgcggatgcccgtggtgatcacacagtctgtcagagcacaagggacaatagggaag
ggggccgtcatccaagcggggagaggtgccatgggaatggcggttcaaatctccgggaat
cagaaaaacaagctcaatgaccccggaggaggctcgttcagggatgatgacgacattaac
gatgtggcgtccatggctggagttaacctgaacgaggagagtgccagaatacttgccacc
aactcagaacttgtgggaactcagatccgctcgtgtaaagacgaggcctttctccatcca
ggactgctacacagacggattctggaaacagccaagaagttcggagtcacggatgtcccc
atggaggcagtaacgttcatctcacacgccacgcagtcacgtctccgcacggtggtagaa
aaggtctctacgatcgcccagcatcgactggactcctgtaaggacgacgagtactacgag
cagaacgccgacgtccgctctcagctgcgcttcttcgagcagttggagaggatggagaag
cagaggaaggacgagcaggagaggntgatcattttgtctgcagagaaacctcgctccagg
caggaggacccagagcaagctagactgaaacagaaagctaaggagatgcagcaacaggag
ctggcacagatgaggcagcgagacgcaaaccttacagcgttagccgccatcggaccccgc
aaaaaacgtaaggtggactctccaggggccacgccatcagggactgaggtgccaggcagc
gcggcggggtctccggccagctcctcggtgccgtccacctcgtcgcgccagtacacgcgg
cagcgcatcacacgcgtgaacctcagggacttaatcttctacatggagcaggagagagag
accacccactccctcctcctctaccgagccctgctcaagtag
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