Cynoglossus semilaevis (tongue sole): 103379502
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Entry
103379502 CDS
T04866
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103379502 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103379502 (sf3b3)
03041 Spliceosome [BR:
csem03041
]
103379502 (sf3b3)
03036 Chromosome and associated proteins [BR:
csem03036
]
103379502 (sf3b3)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103379502 (sf3b3)
Spliceosome [BR:
csem03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
103379502 (sf3b3)
Complex B
103379502 (sf3b3)
Complex C
U2 SnRNP specific factors
103379502 (sf3b3)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
103379502 (sf3b3)
TFTC complex
103379502 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
103379502
NCBI-ProteinID:
XP_008309288
LinkDB
All DBs
Position
6:complement(925626..984202)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKTMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMACQIADLANEDT
PQLYVACGRGPRSTMRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQCTPRKFVIHQETNNLILIESDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGSPKAGAGQWASIVRLINPIQGSTLDQVQLEQNEAAFSVAVCRFTNSG
DDWYVLVGVARDMILNPRSVAGGFIYTYRLTGGGEKLEFVHKTPVEDVPLAIAPFQGRAL
VGIGKLLRIYDMGKKKLLRKCENKHVPNLVTGIYTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDFDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPMCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctacaatatcaccctgcagcgtgccactggcatcacacatgccatccatgga
aacttctcaggaaccaagatgcaggagattgttgtttccagaggcaagatcctggagtta
ctgcgtccagatgccaacacggggaaggtgcacactctgctcacagtagaagtatttggc
atcgttaggtctctgatggccttcaggctcacaggtggaaccaaagattacatcgttgtg
ggcagcgacagtggccgtatcgtcatcctcgaatatcatccgtccaagaacatgtttgag
aagatccaccaggagacgtttggaaagagcggctgtcggcgaattgttcctggacagttc
ctggctgtcgacccaaaaggccgagctgtgatgataggtgccatagaaaaacagaagctg
gtttatattttgaacagagatgcagctgccagactgaccatctcctcgccactagaagcc
cacaaagccaacacactggtgtaccatgtggtcggagttgacgtgggctttgaaaacccc
atgttcgcctgtttggaaatggactacgaggaagctgacaacgatccgaccggagaagct
gctgcaaacacacagcagaccctcaccttttatgagttggacctgggtttgaatcacgtg
gtccgcaaatacagcgaggctttggaagagcacgggaatttcctcatcactgttccggga
ggttccgatggacccagtggcgttctgatctgctccgaaaactacatcacttacaagaac
tttggagaccagccagacatccgctgtcccatcccacgacgtaggaatgacctggatgac
ccagagcgtggcatgatatttgtctgctccgccacgcacaaaacaaagaccatgttcttt
ttcctggctcagaccgaacaaggtgacatctttaaagtcacactggaaacagatgaggaa
atggtcacagaaatccgtctgaaatactttgacactatccccgtggccacagccatgtgt
gtcctgaagaccggcttcctgtttgtggcttcagagtttggaaaccattacctttatcaa
attgcgcacctcggtgacgatgacgacgaaccagagttctcgtctgcgatgccactagaa
gaaggagacactttcttcttccagccccgtccccttaaaaacctggtgctggtggacgag
caggagaacttgtcccccatcatggcctgtcagatcgctgatctggccaatgaagacaca
cctcagttgtatgtggcctgtggacgaggacctaggtctacgatgagggtccttcgtcac
ggactggaggtgtcagagatggctgtgtcagaactgcctggtaacccaaacgctgtgtgg
acagtgcgcagacacgtcgaagacgagtttgacgcctacatcatcgtgtctttcgtcaac
gccactctggtcttgtccatcggagagaccgtggaagaagtgacggattctggcttcttg
ggaacaactcccactctctcctgctccctgctgggtgaagacgctttagtgcaggtttat
cctgacggcatccgtcacatccgtgcagacaaacgtgtgaatgaatggaagaccccgggt
aagaagaccatcgttcgctgtgctgtcaaccaaaggcaggttgttattgccctgactgga
ggagagctggtctactttgagatggacccgtctggccagctgaacgagtacactgaacgt
aaagagatgtctgcagatgtggtgtgcatgagtctggccaacgttcctcctggagagcaa
cgctctcgatttctggccgttggcctggtggacaacactgtccgaatcatctctctggat
ccttcggactgcctgcagcctctcagtatgcaggctctaccggcccagccagagagcttg
tgcatcgtggagatgggtggagtcgagaagcaagatgaacttggggaaaagggaaccatc
gggttcctctacctcaacatcggactgcagaatggtgtcttgctcaggactgtcctggac
cctgtcacgggtgacttgtctgacacaaggacacgatacctggggtcgcgacctgtcaag
ctcttcagggtcagaatgcagggccaggaggctgtgctggccatgtccagtcgctcctgg
ctgagttactcgtaccagtctcgcttccacctgaccccactctcatatgagaccctggag
tatgcctctggttttgcctctgaacaatgtccagaaggtatcgtggccatctccaccaac
acactgagaatcttggctctggagaaattgggggccgtcttcaatcaggtggcatttcct
ctgcagtgcactcccaggaaatttgtgatccaccaggagacgaataacctcattttgatt
gagtccgaccacaatgcttacacggaggcgaccaaagctcagcgaaagcagcagatggcc
gaggaaatggtggaggcagccggtgaagatgaacgagaacttgccgcagagatggcggct
gccttcctcaatgaaaatctcccagaagccatcttcggttcacctaaggccggggccgga
cagtgggcgtctattgtgcgactgattaatcccatacagggttcaactctggaccaggtg
caactggagcagaacgaagctgctttcagtgtggccgtgtgtcgctttacaaactcgggg
gatgattggtacgttctggtgggcgtggccagagacatgattctcaaccccaggtcggtg
gccggcggcttcatctacacctacagactgactggtggaggagagaagctggagtttgtg
cacaagaccccggtggaggacgtgcctttggcaatcgccccatttcagggacgggccctg
gtaggaattggaaaactgctgaggatatacgacatgggaaaaaagaagctgctccgcaag
tgtgaaaacaagcacgtacccaacctggtgaccggtatctataccatcggtcaacgcgtg
atcgtctccgacgtccaagagagtctgttctgggttcgctatcgccgcaacgagaaccag
ctcatcatttttgcggacgacacgtatcctcgctgggtgacgacggcctgtctgctggac
ttcgacaccatggcttcggctgacaagtttggcaacattagcattgttcgtctccctccc
aacacgagtgatgatgtggatgaagatcccacagggaacaaagcactgtgggacagagga
ctcctgaatggagcttcccagaaggcggaggtgataatgaactaccacgtcggtgagacg
gtgttgtcactacagaaaaccactctgattcccggtggttcagagtccctggtctacacc
accctgtccggaggcatcggcatcttggtcccgttcacatcacatgaggaccacgacttc
ttccagcatctggagatgcacatgcgctcggagttcccccccatgtgcggcagagaccac
ctcagctttagatcatattacttcccagtcaagaatgtgattgacggagatctgtgcgag
cagttcaacagcatggacccccacaagcagaagagtgtggcggaggagctggaccgaaca
ccgccggaggtctccaagaagctggaggacattcgcactcgctacgccttttaa
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integrated database retrieval system
