Cynoglossus semilaevis (tongue sole): 103379635
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Entry
103379635 CDS
T04866
Symbol
lamb1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04510
Focal adhesion
csem04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103379635 (lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103379635 (lamb1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
103379635
NCBI-ProteinID:
XP_008309462
LinkDB
All DBs
Position
6:complement(2822294..2834357)
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AA seq
1787 aa
AA seq
DB search
MVLFQLLLLFALQVCTWTQEGGVSDDIIIPEFSDVCTEGSCYPATGDLLIGRAHQLSSTS
TCGLNRPEPFCIVSHLQEEKKCFACDSATAFDERTNHTSSHRVDNVVTSFAPNRLKTWWQ
SENGMENVSIQLDLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKSWQVYRYFAYDCESS
FPHVSHGPMKKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRISDPYSPRIQNLLKITNL
RVKFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVEGTGVASEGM
VHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACRKCNCNQHSDSCHFDMAVFVA
SGNTSGGVCDDCHHNTAGHKCDQCKPFYYQDPEKDLRDPNVCQPCNCDPVGSLNGGSCDQ
TTDVARGTIAGLCRCKVNVEGERCESCRDGTYGLGDTSEGCTACTCSPVGTLPGENPCDK
ETGSCFCKRLVMGQNCDQCVPEHWGLSNDMDGCRPCDCDLGGAVNNQCDDVTGQCVCREH
MFGRRCDQVQSGFYFVALDHYTYEAEDATFGPGVAVVPRPHPLDRSPTWTGLGLVNVPEG
AFLVFSIDNIPYSMEYDIIIRYEPQLPDQWEEVLMTLTRPGPMRADSRCINTVPDDDNQM
VSLHPGSRYLVLPRPVCFESGQNYTLRLSLPLYSALSDVHSPYTLIDSIVLMPHCKNLDI
FSTPEGGDSEGGNSGWETFQRYRCLENSQSVVKTQMTEICRNFIFSISALLHRGAKECQC
DPQGSLSTVCDPNGGQCQCRPNVIGRNCNTCAPATFQFGPNGCKACTCDPQGSQSPVCDQ
FSGQCPCVPGAYGRQCERCLPGHWGFPTCRPCSCNGHTDHCDPDTGVCLDCRDFTTGHSC
DRCLDGYHGDPVLGSGDHCRPCMCPDGPSSQRQFAGTCYQSFDSEQVVCVCKTGYRGGRC
DVCSPGYYGNPDQVGGECRPCQCNNNIDVSDPESCDSRTGECRQCLYHTEGGACENCRLG
YYGDALSQDCRKCVCSTLGTDPSTCQSPGECACERDSGQCPCLPNVEGQECQRCVPNTWN
LASGAGCQSCDCDVKHSFGSSCDQVSGQCSCHPGFGGRTCSECRELFWGDPEVQCQACDC
DPRGTAQPQCDKADGRCVCVEGVAGPRCDTCARGFSGTFPDCRRCHQCFADWDDIIGQMT
NQTHRLVNKVNALKAGPVAGPYKKSMESIEKSVGELQVLLNQNPAAQPLTEIQNLLQETS
DQIRTLGQTLNNTEEAMVQVGDQDSAAEKNLDSVMLDTRKLEQTVQELLAQVEVIKNSDI
RGAAASVTKYFLQSQEAEARANASTVDEGSDVKTSEDLRRLTEDKMNISREDFLKRQSEH
AQKLDELAEDLQTLDLSEISQKTCGASSGVQDGCGSSSSDGQSECEGEGCHGVVTMANNV
WKKAQEQEQEIINAMGEVEKLSKMVSEMKLKADEAKVNAQEALMKTNRTKQRVDQSNQEL
RRLIGQIRDFLTQDAADLESVELVANEVLQMQMPTTPAQLQNLTEEIRQKVGELGDVESI
LQQSTDDIQKAENLLDQARQASEEAANVKESAEKVKKALEEAEKAQNIANSAIQRATADI
HNTNTLLSVVKSETAEAEIRLTNATQRLQRLGQNVTLLRDKAENISLSSQQTSEDAAVVQ
RIAEEVTKELDSDVKDKYATVGQLIDQKAEGVATAKKRAESLQQEAKALLLQASDKLQLL
KDLEKSYSDNQQTLELKAQLLVELEAAVKDLLQDISHKVTVYSTCLF
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atggttctgtttcagctgctgctgctgtttgctctgcaggtgtgtacatggacccaggaa
ggcggggtctctgatgacatcatcatacctgaattcagtgacgtctgcaccgagggcagt
tgttacccagccacaggagaccttcttattggacgagctcatcagctgtcgtccacctcc
acctgcggtctgaaccgaccagaacccttctgcatcgtcagccacctgcaggaggagaag
aaatgttttgcgtgcgactcggcaacagcgttcgacgagcggaccaatcataccagcagc
catcgtgtagacaatgtggtgacgtcgttcgctccgaaccgactgaagacctggtggcaa
tcggagaacggaatggagaacgttagcatccaactggacctggaggcggagtttcacttt
actcacctcatcatgaccttcaagacgttccgtcccgctgccatggtgatcgagcgctct
gcggacttcggaaagtcgtggcaggtttatcgatacttcgcctacgactgcgagagttcg
tttccccacgtgtcccatggtccaatgaagaaggtcgatgatgtcatctgtgactcgcgc
tactcagacattgagccgtccaccgaaggagaggtgatcttcagagttctggacccagcg
ttcaggatcagcgacccgtacagtcccagaatacagaacctgctgaagatcaccaacctc
cgagtaaagttcacaaagctccacaccctcggagacaacctcctggactcccgaatggag
atcaaggagaagtattactacgccatctacgacatggtggtgcgaggaaactgtttctgc
tacggacatgcctcggagtgtgcccccgttgaggggacgggtgtggccagcgagggcatg
gtccacggtcactgcatgtgcaaccacaacaccaaaggtctgaactgtgaacagtgtcag
gacttttaccacgacctgccctggagaccagccgaggggcgcaacaccaacgcctgcagg
aagtgcaactgcaaccagcactcggactcgtgtcacttcgacatggccgtgttcgtggcg
tcaggaaacaccagcggcggcgtctgtgacgactgtcaccacaacacagccggtcacaag
tgtgaccagtgtaaacccttctactaccaggacccagagaaggacctgagggaccccaac
gtctgccaaccctgcaactgtgaccccgttggttctctcaacggagggtcatgtgaccag
acgaccgacgtggctcgtggaacgatcgcaggtctgtgtcgctgtaaggtcaacgtagaa
ggagaacgatgtgaaagctgcagagatggaacctacggcctgggcgacacctcggaggga
tgtacagcgtgcacctgcagccccgttggaacacttcctggagaaaacccatgtgacaaa
gagacaggaagttgtttctgcaaacgtctggtgatgggacagaactgtgaccagtgtgtg
cctgaacactggggcctcagcaacgacatggacggctgtcgaccatgtgactgcgacctg
ggaggagccgtcaacaaccagtgtgatgatgtcacgggtcagtgtgtgtgcagagagcac
atgtttggccgccgctgtgatcaggttcagtctggattctacttcgtggccctggatcac
tacacgtatgaagcagaggacgccaccttcggacccggcgtggcagttgtgcccaggcca
caccccctggaccgcagtcccacgtggaccggtttgggtctggtcaacgttccagaaggc
gccttcttggtcttcagtattgacaacattccttactccatggagtatgacatcataatt
cgctatgagccccagcttccagaccaatgggaggaggttctgatgacgctgaccagacct
ggaccaatgagagctgacagtcgctgcatcaacactgtacctgacgatgacaaccagatg
gtgtcgctgcatcctggctcgaggtacctggttctaccccgacccgtgtgttttgaatcc
ggtcagaactacaccctccgcctcagtctgccactctactcggctttgagcgacgtgcac
agtccgtacacactcatcgactcgatcgtgttgatgcctcactgtaagaacttggacatc
ttcagtaccccggagggcggagactctgaaggcgggaacagtggctgggagacgttccag
cggtaccgatgcttagagaacagtcagagtgtcgtcaagacacagatgactgaaatctgc
aggaacttcatcttcagcatctccgctctgctgcaccggggagccaaagagtgtcagtgt
gacccacaaggttccctcagtactgtctgtgaccccaacgggggccagtgtcagtgtcgc
ccaaacgtcataggaaggaactgtaacacgtgtgctccagccacgttccaatttggtccc
aatggctgcaaagcctgtacgtgcgaccctcagggttctcagagccccgtctgtgaccag
ttcagcggtcagtgtccgtgtgtcccgggcgcgtacggaagacagtgtgaacgatgtctg
ccgggacactgggggtttcccacctgtcgaccctgttcctgtaatggacacactgaccac
tgtgacccggacactggagtctgtctggactgcagagacttcaccaccggacacagctgt
gacaggtgtctcgatgggtaccacggtgaccccgtactgggttccggggaccactgtcgt
ccctgcatgtgtcctgatggtcccagcagccaaaggcagttcgcaggaacatgttatcaa
agctttgactcagagcaggtggtctgtgtctgcaagaccgggtacagaggtggtcgttgt
gacgtgtgctctcctgggtattacggtaacccagaccaggtgggtggggagtgtcgtccg
tgtcagtgcaacaacaacatcgacgtgtccgatccggaatcatgtgactctcggaccggc
gaatgtaggcagtgcctgtaccacacggagggcggagcctgtgagaactgtcgtctgggt
tactacggcgacgccttgagtcaggactgcaggaagtgtgtgtgcagcacactgggaact
gatccgtccacctgtcaatcaccgggagagtgtgcgtgcgagcgtgacagcggacaatgt
ccctgccttcctaatgtggagggtcaggagtgccaacgatgtgttcccaatacctggaac
ctggccagcggtgccggatgtcagtcatgtgactgtgatgtcaaacattcatttggttca
tcatgtgaccaggtgagcggacagtgttcctgtcatccaggctttggaggaagaacctgc
agcgagtgtcgggaactgttctggggcgatccagaggtccagtgtcaggcctgtgactgt
gacccgcggggcaccgcccagccgcagtgtgacaaggcggacggtcggtgtgtgtgcgtg
gagggcgtggccggaccgcgctgtgacacctgtgctcgtggtttctctggaacattccca
gactgtcgccgctgccaccagtgcttcgctgactgggatgacatcatcggtcagatgacc
aaccaaacgcacagattggtcaacaaggtcaacgccctgaaagctggaccggtcgccggg
ccgtacaagaagtccatggagtccatagagaagagtgttggggaactgcaggtcctcctg
aaccagaacccggctgcacagccgctcactgagatccagaaccttctacaggagaccagt
gaccagattagaaccctgggccagacgttgaacaacacagaggaggccatggtccaagtt
ggagatcaggactctgcagcagaaaagaatctggacagtgtgatgttggacactcggaaa
ctggagcaaacggttcaggagctgctggctcaggtggaggtcatcaaaaactcagacatc
agaggtgcagcggccagcgtcactaagtacttcctgcagtcacaggaagctgaagctcga
gccaacgcctctactgtggatgaaggcagtgacgtgaagacatctgaagatctgcgccgc
ctcacagaagacaaaatgaacatcagcagagaagacttcctgaaaagacaatctgagcat
gctcagaaactggacgagttggccgaagaccttcagaccctggacctgtcagagatcagt
cagaagacctgtggcgcctcctcaggggtccaggacgggtgcggttcttcttcctctgac
ggtcagtctgagtgtgaaggtgaaggctgtcacggcgtggtgaccatggccaacaacgtc
tggaagaaggctcaggaacaggaacaggaaatcatcaacgccatgggtgaggtggagaag
ctctccaagatggtctcagagatgaagctgaaggcagatgaagctaaagtcaacgctcag
gaagctctgatgaagaccaacagaaccaaacagagggtggaccagagcaaccaggagctc
agacgcctcatcggacagatccgagacttcctgacacaggatgctgcagacctggagagc
gtcgagctggtggccaatgaagttctgcagatgcagatgccgacgactccggctcagctg
cagaacctgacggaggagatccgacagaaagttggagaactcggtgatgtggagtccatc
cttcagcagagcactgatgacattcaaaaagctgagaacctgctggaccaggctcgacaa
gccagtgaagaagcagcaaatgtgaaggaatctgcagagaaggtgaaaaaagccctggaa
gaagctgagaaagcacagaacattgccaacagcgccatccagagggctaccgcagacatc
cacaacaccaacaccctattgtctgtggtcaagtctgaaacggctgaggcggagataagg
ctgactaacgccacccagaggctgcagaggctggggcagaatgtgacgctgctaagagac
aaagctgaaaacatttctctgagcagccaacagaccagtgaggacgcagcagtggtccag
aggatcgcagaggaagtgacaaaggagctggattcagatgtgaaggacaagtacgccacc
gtgggccagctgattgatcagaaggctgaaggtgtggccactgccaagaagagggcggag
tctctgcaacaggaagccaaagctcttttactacaggccagtgacaagctgcagctgcta
aaagatctagaaaagtcatacagcgataaccagcaaactctggagctgaaggctcagctg
ctagtggagctggaggcggcggtcaaagatctgctgcaggacatcagccacaaagtcaca
gtctacagcacctgcctattctga
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