KEGG   Cynoglossus semilaevis (tongue sole): 103379635
Entry
103379635         CDS       T04866                                 
Symbol
lamb1
Name
(RefSeq) laminin subunit beta-1
  KO
K05636  laminin, beta 1
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04510  Focal adhesion
csem04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:csem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103379635 (lamb1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103379635 (lamb1)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C
Other DBs
NCBI-GeneID: 103379635
NCBI-ProteinID: XP_008309462
LinkDB
Position
6:complement(2822294..2834357)
AA seq 1787 aa
MVLFQLLLLFALQVCTWTQEGGVSDDIIIPEFSDVCTEGSCYPATGDLLIGRAHQLSSTS
TCGLNRPEPFCIVSHLQEEKKCFACDSATAFDERTNHTSSHRVDNVVTSFAPNRLKTWWQ
SENGMENVSIQLDLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKSWQVYRYFAYDCESS
FPHVSHGPMKKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRISDPYSPRIQNLLKITNL
RVKFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVEGTGVASEGM
VHGHCMCNHNTKGLNCEQCQDFYHDLPWRPAEGRNTNACRKCNCNQHSDSCHFDMAVFVA
SGNTSGGVCDDCHHNTAGHKCDQCKPFYYQDPEKDLRDPNVCQPCNCDPVGSLNGGSCDQ
TTDVARGTIAGLCRCKVNVEGERCESCRDGTYGLGDTSEGCTACTCSPVGTLPGENPCDK
ETGSCFCKRLVMGQNCDQCVPEHWGLSNDMDGCRPCDCDLGGAVNNQCDDVTGQCVCREH
MFGRRCDQVQSGFYFVALDHYTYEAEDATFGPGVAVVPRPHPLDRSPTWTGLGLVNVPEG
AFLVFSIDNIPYSMEYDIIIRYEPQLPDQWEEVLMTLTRPGPMRADSRCINTVPDDDNQM
VSLHPGSRYLVLPRPVCFESGQNYTLRLSLPLYSALSDVHSPYTLIDSIVLMPHCKNLDI
FSTPEGGDSEGGNSGWETFQRYRCLENSQSVVKTQMTEICRNFIFSISALLHRGAKECQC
DPQGSLSTVCDPNGGQCQCRPNVIGRNCNTCAPATFQFGPNGCKACTCDPQGSQSPVCDQ
FSGQCPCVPGAYGRQCERCLPGHWGFPTCRPCSCNGHTDHCDPDTGVCLDCRDFTTGHSC
DRCLDGYHGDPVLGSGDHCRPCMCPDGPSSQRQFAGTCYQSFDSEQVVCVCKTGYRGGRC
DVCSPGYYGNPDQVGGECRPCQCNNNIDVSDPESCDSRTGECRQCLYHTEGGACENCRLG
YYGDALSQDCRKCVCSTLGTDPSTCQSPGECACERDSGQCPCLPNVEGQECQRCVPNTWN
LASGAGCQSCDCDVKHSFGSSCDQVSGQCSCHPGFGGRTCSECRELFWGDPEVQCQACDC
DPRGTAQPQCDKADGRCVCVEGVAGPRCDTCARGFSGTFPDCRRCHQCFADWDDIIGQMT
NQTHRLVNKVNALKAGPVAGPYKKSMESIEKSVGELQVLLNQNPAAQPLTEIQNLLQETS
DQIRTLGQTLNNTEEAMVQVGDQDSAAEKNLDSVMLDTRKLEQTVQELLAQVEVIKNSDI
RGAAASVTKYFLQSQEAEARANASTVDEGSDVKTSEDLRRLTEDKMNISREDFLKRQSEH
AQKLDELAEDLQTLDLSEISQKTCGASSGVQDGCGSSSSDGQSECEGEGCHGVVTMANNV
WKKAQEQEQEIINAMGEVEKLSKMVSEMKLKADEAKVNAQEALMKTNRTKQRVDQSNQEL
RRLIGQIRDFLTQDAADLESVELVANEVLQMQMPTTPAQLQNLTEEIRQKVGELGDVESI
LQQSTDDIQKAENLLDQARQASEEAANVKESAEKVKKALEEAEKAQNIANSAIQRATADI
HNTNTLLSVVKSETAEAEIRLTNATQRLQRLGQNVTLLRDKAENISLSSQQTSEDAAVVQ
RIAEEVTKELDSDVKDKYATVGQLIDQKAEGVATAKKRAESLQQEAKALLLQASDKLQLL
KDLEKSYSDNQQTLELKAQLLVELEAAVKDLLQDISHKVTVYSTCLF
NT seq 5364 nt   +upstreamnt  +downstreamnt
atggttctgtttcagctgctgctgctgtttgctctgcaggtgtgtacatggacccaggaa
ggcggggtctctgatgacatcatcatacctgaattcagtgacgtctgcaccgagggcagt
tgttacccagccacaggagaccttcttattggacgagctcatcagctgtcgtccacctcc
acctgcggtctgaaccgaccagaacccttctgcatcgtcagccacctgcaggaggagaag
aaatgttttgcgtgcgactcggcaacagcgttcgacgagcggaccaatcataccagcagc
catcgtgtagacaatgtggtgacgtcgttcgctccgaaccgactgaagacctggtggcaa
tcggagaacggaatggagaacgttagcatccaactggacctggaggcggagtttcacttt
actcacctcatcatgaccttcaagacgttccgtcccgctgccatggtgatcgagcgctct
gcggacttcggaaagtcgtggcaggtttatcgatacttcgcctacgactgcgagagttcg
tttccccacgtgtcccatggtccaatgaagaaggtcgatgatgtcatctgtgactcgcgc
tactcagacattgagccgtccaccgaaggagaggtgatcttcagagttctggacccagcg
ttcaggatcagcgacccgtacagtcccagaatacagaacctgctgaagatcaccaacctc
cgagtaaagttcacaaagctccacaccctcggagacaacctcctggactcccgaatggag
atcaaggagaagtattactacgccatctacgacatggtggtgcgaggaaactgtttctgc
tacggacatgcctcggagtgtgcccccgttgaggggacgggtgtggccagcgagggcatg
gtccacggtcactgcatgtgcaaccacaacaccaaaggtctgaactgtgaacagtgtcag
gacttttaccacgacctgccctggagaccagccgaggggcgcaacaccaacgcctgcagg
aagtgcaactgcaaccagcactcggactcgtgtcacttcgacatggccgtgttcgtggcg
tcaggaaacaccagcggcggcgtctgtgacgactgtcaccacaacacagccggtcacaag
tgtgaccagtgtaaacccttctactaccaggacccagagaaggacctgagggaccccaac
gtctgccaaccctgcaactgtgaccccgttggttctctcaacggagggtcatgtgaccag
acgaccgacgtggctcgtggaacgatcgcaggtctgtgtcgctgtaaggtcaacgtagaa
ggagaacgatgtgaaagctgcagagatggaacctacggcctgggcgacacctcggaggga
tgtacagcgtgcacctgcagccccgttggaacacttcctggagaaaacccatgtgacaaa
gagacaggaagttgtttctgcaaacgtctggtgatgggacagaactgtgaccagtgtgtg
cctgaacactggggcctcagcaacgacatggacggctgtcgaccatgtgactgcgacctg
ggaggagccgtcaacaaccagtgtgatgatgtcacgggtcagtgtgtgtgcagagagcac
atgtttggccgccgctgtgatcaggttcagtctggattctacttcgtggccctggatcac
tacacgtatgaagcagaggacgccaccttcggacccggcgtggcagttgtgcccaggcca
caccccctggaccgcagtcccacgtggaccggtttgggtctggtcaacgttccagaaggc
gccttcttggtcttcagtattgacaacattccttactccatggagtatgacatcataatt
cgctatgagccccagcttccagaccaatgggaggaggttctgatgacgctgaccagacct
ggaccaatgagagctgacagtcgctgcatcaacactgtacctgacgatgacaaccagatg
gtgtcgctgcatcctggctcgaggtacctggttctaccccgacccgtgtgttttgaatcc
ggtcagaactacaccctccgcctcagtctgccactctactcggctttgagcgacgtgcac
agtccgtacacactcatcgactcgatcgtgttgatgcctcactgtaagaacttggacatc
ttcagtaccccggagggcggagactctgaaggcgggaacagtggctgggagacgttccag
cggtaccgatgcttagagaacagtcagagtgtcgtcaagacacagatgactgaaatctgc
aggaacttcatcttcagcatctccgctctgctgcaccggggagccaaagagtgtcagtgt
gacccacaaggttccctcagtactgtctgtgaccccaacgggggccagtgtcagtgtcgc
ccaaacgtcataggaaggaactgtaacacgtgtgctccagccacgttccaatttggtccc
aatggctgcaaagcctgtacgtgcgaccctcagggttctcagagccccgtctgtgaccag
ttcagcggtcagtgtccgtgtgtcccgggcgcgtacggaagacagtgtgaacgatgtctg
ccgggacactgggggtttcccacctgtcgaccctgttcctgtaatggacacactgaccac
tgtgacccggacactggagtctgtctggactgcagagacttcaccaccggacacagctgt
gacaggtgtctcgatgggtaccacggtgaccccgtactgggttccggggaccactgtcgt
ccctgcatgtgtcctgatggtcccagcagccaaaggcagttcgcaggaacatgttatcaa
agctttgactcagagcaggtggtctgtgtctgcaagaccgggtacagaggtggtcgttgt
gacgtgtgctctcctgggtattacggtaacccagaccaggtgggtggggagtgtcgtccg
tgtcagtgcaacaacaacatcgacgtgtccgatccggaatcatgtgactctcggaccggc
gaatgtaggcagtgcctgtaccacacggagggcggagcctgtgagaactgtcgtctgggt
tactacggcgacgccttgagtcaggactgcaggaagtgtgtgtgcagcacactgggaact
gatccgtccacctgtcaatcaccgggagagtgtgcgtgcgagcgtgacagcggacaatgt
ccctgccttcctaatgtggagggtcaggagtgccaacgatgtgttcccaatacctggaac
ctggccagcggtgccggatgtcagtcatgtgactgtgatgtcaaacattcatttggttca
tcatgtgaccaggtgagcggacagtgttcctgtcatccaggctttggaggaagaacctgc
agcgagtgtcgggaactgttctggggcgatccagaggtccagtgtcaggcctgtgactgt
gacccgcggggcaccgcccagccgcagtgtgacaaggcggacggtcggtgtgtgtgcgtg
gagggcgtggccggaccgcgctgtgacacctgtgctcgtggtttctctggaacattccca
gactgtcgccgctgccaccagtgcttcgctgactgggatgacatcatcggtcagatgacc
aaccaaacgcacagattggtcaacaaggtcaacgccctgaaagctggaccggtcgccggg
ccgtacaagaagtccatggagtccatagagaagagtgttggggaactgcaggtcctcctg
aaccagaacccggctgcacagccgctcactgagatccagaaccttctacaggagaccagt
gaccagattagaaccctgggccagacgttgaacaacacagaggaggccatggtccaagtt
ggagatcaggactctgcagcagaaaagaatctggacagtgtgatgttggacactcggaaa
ctggagcaaacggttcaggagctgctggctcaggtggaggtcatcaaaaactcagacatc
agaggtgcagcggccagcgtcactaagtacttcctgcagtcacaggaagctgaagctcga
gccaacgcctctactgtggatgaaggcagtgacgtgaagacatctgaagatctgcgccgc
ctcacagaagacaaaatgaacatcagcagagaagacttcctgaaaagacaatctgagcat
gctcagaaactggacgagttggccgaagaccttcagaccctggacctgtcagagatcagt
cagaagacctgtggcgcctcctcaggggtccaggacgggtgcggttcttcttcctctgac
ggtcagtctgagtgtgaaggtgaaggctgtcacggcgtggtgaccatggccaacaacgtc
tggaagaaggctcaggaacaggaacaggaaatcatcaacgccatgggtgaggtggagaag
ctctccaagatggtctcagagatgaagctgaaggcagatgaagctaaagtcaacgctcag
gaagctctgatgaagaccaacagaaccaaacagagggtggaccagagcaaccaggagctc
agacgcctcatcggacagatccgagacttcctgacacaggatgctgcagacctggagagc
gtcgagctggtggccaatgaagttctgcagatgcagatgccgacgactccggctcagctg
cagaacctgacggaggagatccgacagaaagttggagaactcggtgatgtggagtccatc
cttcagcagagcactgatgacattcaaaaagctgagaacctgctggaccaggctcgacaa
gccagtgaagaagcagcaaatgtgaaggaatctgcagagaaggtgaaaaaagccctggaa
gaagctgagaaagcacagaacattgccaacagcgccatccagagggctaccgcagacatc
cacaacaccaacaccctattgtctgtggtcaagtctgaaacggctgaggcggagataagg
ctgactaacgccacccagaggctgcagaggctggggcagaatgtgacgctgctaagagac
aaagctgaaaacatttctctgagcagccaacagaccagtgaggacgcagcagtggtccag
aggatcgcagaggaagtgacaaaggagctggattcagatgtgaaggacaagtacgccacc
gtgggccagctgattgatcagaaggctgaaggtgtggccactgccaagaagagggcggag
tctctgcaacaggaagccaaagctcttttactacaggccagtgacaagctgcagctgcta
aaagatctagaaaagtcatacagcgataaccagcaaactctggagctgaaggctcagctg
ctagtggagctggaggcggcggtcaaagatctgctgcaggacatcagccacaaagtcaca
gtctacagcacctgcctattctga

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