Cynoglossus semilaevis (tongue sole): 103379694
Help
Entry
103379694 CDS
T04866
Symbol
ambra1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04137
Mitophagy - animal
csem04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103379694 (ambra1)
04137 Mitophagy - animal
103379694 (ambra1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103379694 (ambra1)
03029 Mitochondrial biogenesis [BR:
csem03029
]
103379694 (ambra1)
Membrane trafficking [BR:
csem04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
103379694 (ambra1)
Mitochondrial biogenesis [BR:
csem03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
103379694 (ambra1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
103379694
NCBI-ProteinID:
XP_008309546
LinkDB
All DBs
Position
6:complement(4448405..4459858)
Genome browser
AA seq
1423 aa
AA seq
DB search
MASRHRNSVRILSNRERGSQTFGSQRLLQLLVEEKVRWMKWQSQKVELPDSPRSTFLLAF
SPDRTLMASTHVNHNIYITEVKTGKCLHSLVGHRRTPWCVTFHPTIPGLVASGCLDGEVR
IWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNELHFWDWSRPEPFAVVKTGSDTE
RVRLVRFDPLGHNLLTAIVNPSNQQNDEDAEVPMDSVEMPHFRQRSFLPTQPVRRTPILH
NFLHILSSRSPAAQVGGEQPTRGSPLGDSGSNVGESPSIPLAQYPGSERGPPFPGCTQHL
GMVCLCSRCSANRNPSLSTNSSIMTQSGPRTSPDAPTPPPTSTFSSARTEPRQPSERTSA
FTSVYYSAGSSLNPSMPHPATRTGPDWTRNLLSMREGGVGPVMLPPRTSSSSSISLLSVL
RQQDGSSHSPVYTSATEGRGYPQQGEAGARDAAGTSSGHHPFWDGSRGNTASFRNVLQCN
LSRYFMEFDRMQDLEPPLGGAMSDRGQEQSQELLNNNMDPNRPGPSSSLSSSSTPTIIHY
QPPLPPPLASHVPENNGPPLSSRGHLNRCRACHNLLTFNHDSQRWERTNQASSTSASTLD
PSSSSSSSSPFPAAASPSAPWQHDESRRTLEVQNPERRLPLDSIEQPHPPVGGAAGAVTF
PIAPSTSQPGEQTVGLVYNQDTAQWERVYRQAAAGRSAEPPETLSQEMPVDPPDEDSLRR
RLLESSLLSLSRYDMSGSRDHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQQN
RLRAMSTSSDSPANNPSNSMDNSEVDFEELDDTGDRARHRTPRNARMSAPSLGRFVPRRF
FLPEYLPYAGIFHERGQPGLATHSSVNRVLAGASIGDGQSAVASNIANTTYRLQWWDFTK
FDLPEVSNASVNVLVPNCKIYNDASCDISADGQLLAVFIPSSQRGFPDEGILAIYSLAPH
NLGEMLYTKRFGPNAISVSLSPLGCYVMVGLASRRILLHPNTDHMVAQVFRLQQPHGGET
SIRMVFNVVYPMAPDQRRHVSINSARWLPDPGMGLAYGTNKGDLVICRPVFYRSDGENPG
ESNLEPLFSVNNSGTSRSRGSERSGPNRSSWRLDRDMGLMNAIGLQPRHPTPSVTSQGTQ
TPIVQLQNAETQTEREQEPEPSVSGPPPETPSTSGAAQGGLQESESSRSLGGVQSEPQAD
ANSSTPAGTAGTAGESSEFGSGEDALARIRRLIAEGGMTAVVQREQSTTMASMGGFGNNI
IVSHRIHRGSQTGTGASRPAFDPTTCDTPSTSSASSSGPLLITQLQDQPHLTSPVSPTST
EAPPSTWGPEVLSGPAPPGLSVAVGVDDVFGGGEFLVGGVEDSLPGPSSSSSSQLLSSTS
FSPSLSSSSTAAAVAVEGETTTPPPLSHNTGTSPIGPEQQSAG
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcgtcataggaactcggtgcgcatcctgtccaacagggagcgtggttctcag
acgtttggatctcagcggctccttcagttactggtggaggagaaagtccggtggatgaaa
tggcagagtcagaaggtggagttgcctgacagtcctcgatctactttcctgctcgcgttc
agccctgacaggacactgatggcttccacacatgtcaaccacaacatttacataacggag
gtgaagacaggaaagtgcctacattccttagtgggccaccgtagaaccccctggtgtgtt
accttccaccccacaatacccggccttgtggcctctgggtgccttgatggtgaagtccgc
atctgggaccttcatggtggcagtgagagctggtttacagaaagtaacgtggccatcgcc
tcattggccttccaccccactgctcagctcctcctcatcgccaccaacaacgaactccat
ttctgggactggagtcgacctgaaccctttgctgtagtcaagacgggcagtgacacagag
agagtgcggttggtgagatttgatcctctgggtcacaacctgctgacagcaatagtcaat
ccgtccaatcagcagaacgacgaggatgccgaggttcccatggacagtgtggagatgcca
cactttcgccagcgctccttcctgccaacacaaccagtgcgccgtacaccgatcctccac
aacttccttcacatcctgtcatcccgctccccggcagctcaggttggaggcgagcagccc
acacgcgggtctcccctgggggatagtggaagtaatgtcggggagtctcccagcattcct
ctggctcagtacccgggctcagaacgcggacccccctttcctggctgcactcagcacctg
ggcatggtttgtctgtgcagtcgctgctcagccaatcgaaatccttcgctgtccaccaac
agctccatcatgacccagtcaggtccccggacctcgcctgatgctcccacacctccccca
acctccaccttctcttcggcccgtactgagcccagacagccttcagagcgaacctcggcc
ttcacctccgtctactacagcgccggttcttctcttaacccctccatgccgcaccccgcc
accagaacaggaccagactggactcgcaatctgttaagcatgagggaaggtggtgtcggt
ccagtgatgctgcctcccagaacctcctcttcctcttccatcagccttctttcagtgctc
cgtcagcaggatggctcttcccactcgcctgtttacacttctgccactgaggggcggggt
tatccccaacaaggagaagcgggagcccgggacgctgccggaaccagcagtggacaccac
cccttctgggacggctctcgtggcaacactgcctcgttccgtaacgtgctgcagtgcaac
ctgagccgctacttcatggagtttgaccgcatgcaggacctggagcccccactaggtggt
gccatgtcagacagaggacaggagcaaagtcaagagttactgaacaacaacatggaccca
aacagaccagggccatcctcgtccctctcttcctcctccacccccaccattattcactac
cagcctcctcttcctcctcccctcgcctcccacgtcccggagaacaacggccctccccta
tcctccagaggccacctgaaccgttgccgggcctgtcacaacctactgacattcaatcat
gactcgcagcgctgggaacgaaccaaccaggcctcctccacctccgcctcgaccctggac
ccctcctcctcttcctcttcttcctcaccctttcctgctgctgcttcaccttcagctccg
tggcagcatgatgaaagcaggaggacactcgaagtccaaaatccagaaaggaggctgcca
ctagactctattgagcaaccacaccctcctgtaggtggcgcagcaggagcagttaccttt
ccaattgccccgtccaccagccagccaggagagcagacggtgggcttggtctacaaccag
gacacagcgcagtgggagcgggtgtaccgacaggccgccgctggtcgatcagcagaacca
cctgagaccttaagccaagaaatgcctgttgatcctcctgatgaagactccctgaggagg
cgattgttggaatcgtcacttttatccttgtctcgctacgacatgtcaggatccagagat
caccccatttatcctgatccagccagactgtctccagctgcttactacgcccagaggatg
atccagtacctgtccagacgggacagcatccgccagcgctcacttcgttaccagcagaac
cggctgcgggccatgtccacatcgtccgacagccctgccaacaacccgtccaactccatg
gacaacagtgaggtggactttgaggagctggatgacactggagacagagccagacatagg
acgccacgcaacgctaggatgtctgcaccgtctctgggtcgctttgttccacggcggttc
ttcctccctgaatacttgccctacgctggaatcttccatgagcgggggcagcccggtctg
gccacacactcctccgtcaacagagtcctagcaggggcgtccatcggggacggccagtct
gcggtggccagcaacatcgccaacaccacctacaggctgcagtggtgggacttcaccaag
tttgacctaccagaggtcagcaacgcttctgtcaacgttctggtgccaaactgtaaaatc
tacaacgatgcgagctgcgacatctctgcagacggtcagctgctggccgtttttattcct
agcagtcagcgggggtttcccgacgagggcattctggccatttactctttggctcctcac
aacctgggagagatgctctacaccaagagatttggtccaaatgccatctctgtcagcttg
tctcccttgggctgctatgtgatggttggtctggcctcacgcaggatcctgctgcatcct
aacactgaccacatggtggcgcaagttttccgcctacagcagccacatggaggagagacg
tccatcaggatggtcttcaacgtggtctaccctatggctccagaccagcggcgccacgtc
agcatcaactcggctcgttggctcccagatccgggaatgggtctggcttatgggaccaac
aagggagacctggtcatctgtcggcctgtgttctaccgcagtgatggtgagaaccctgga
gagtcgaacctggaacctttgttttctgtcaacaacagtggaaccagtcggagtcgaggt
tctgaaagatcaggtccaaaccgctccagttggaggctggacagagacatgggattgatg
aacgccattggtctccagcccagacatcccaccccctctgtgacatcacagggaacacag
acgccaatcgtccagctgcagaacgccgagacacaaacggagagggagcaggaaccagaa
cccagtgtgtctggacctcccccagagactccttctacaagtggagcggctcaggggggg
ctgcaggagtctgagagcagccggtctctggggggcgttcagagtgagcctcaagctgat
gctaactcgtccacacctgctggtactgctggtactgctggtgagtcctcagagtttggt
tccggtgaagatgccctggccaggatccgcaggttaatagcagagggcgggatgacggcg
gtggtgcagcgggagcagagcaccaccatggcctctatgggtggatttgggaacaacatc
atcgtcagccaccgtatccaccgcggctctcagactggcaccggggcctcaagacctgcc
tttgaccctaccacgtgtgataccccctccacctcctccgcctcctcctctggaccgctc
ctcatcactcagcttcaggaccagccacacctgacttccccggtgtcccctacatccact
gaagcccctccctctacatggggtccagaggtgctgtctggcccagcgccccctggactt
tctgtggctgtgggagtggatgatgtttttggtggaggggagtttttggtggggggggtt
gaggactctctgccaggtccttcttcctcctcctcctcccagctgctgtcttccacttcc
ttttcaccttctctgtcatcttcctccacagcagcagcagtggcggtggagggggagaca
acaacaccccccccactgtcccataacacagggacttctcccattggcccagagcagcag
agcgctggctga
DBGET
integrated database retrieval system
