Cynoglossus semilaevis (tongue sole): 103379755
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Entry
103379755 CDS
T04866
Symbol
utp4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103379755 (utp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csem03009
]
103379755 (utp4)
Ribosome biogenesis [BR:
csem03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103379755 (utp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
EIF3I
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_Gbeta
RMC1_N
DUF7165
PROPPIN
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_ELP1_1st
Cytochrom_D1
Beta-prop_KIB1-4
Motif
Other DBs
NCBI-GeneID:
103379755
NCBI-ProteinID:
XP_008309637
UniProt:
A0A3P8UFP2
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All DBs
Position
6:4988887..4995036
Genome browser
AA seq
685 aa
AA seq
DB search
MGEFKVHRVRFFEYLPSAIRALAFNKDSERMAVARTDGAVEIFNFSDNYFQEKVIPGKDS
RAAETLCWLHHRLFAAGLNGEITEYDLENLKPRSSVETFGGPVWTIGCNRQGTMLAAGCE
NGTVKIFEVQEEKIQLQRSLERQKGRILSLSWHPSGAQLAAGTMDMIRIFDVQTGCATHR
LLVDRGVGTCRNREVVVWSVLFLSDRTVISGDSAGKVQIWDGATGTLIRTHLVTKWDVLA
LAVSQDESSVIAGTSEGTVVQFQFLPSTMGQQEKEWVRTRTFKNHSHDVRALIHTDTAVV
SGGMDTQLVVRPLLDKVEKNTQESSMRKILFPHKPLVDCAHRAGLLLFQFTDHLELWRLG
ESEGQGKPGESLPVKKKPEKLIHLKKKGDDHICSSALSSCGGWLVFSTICSVRLYRVQLS
NNTVSLTKVSKLPRILCWAHQLCFSADSSRLFAAGARSSVHVFSLSQSECKHIHTLRPKS
GSRQPLHLLCVSQDGHWLAAANTDCEVTVYDLKTMKLHCTVPVYSSCPTAMAFHPVYNNL
LMTHADQQLSEFSVQQRSYTEWSRALHRRGLHPLWLKRDTPVTHITFNPTNPAHILLHDT
YMFCIIDQTLPLPDEKSVLFNQMMLRSLPESERMRHSHAFKICKNFQNILCFDLLEDQSL
VVVERPLLDIMSQLPAPVRQKKFAT
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagtttaaggtccatcgcgttcgcttcttcgagtacttgcccagtgcgatccga
gctctggcgtttaacaaagactcagagcgaatggctgtggctcggacagacggagcggtg
gagatcttcaacttcagcgacaactacttccaggaaaaggtgattccaggtaaagacagc
agagctgcagagacactgtgttggcttcaccatcggctctttgctgctggtttgaacggt
gagatcacagagtacgacctggaaaacctgaagcccaggtccagtgtggagacgtttggt
ggaccagtgtggaccatcggctgcaaccgacagggcaccatgctggctgcgggctgtgag
aatgggacagtgaagatttttgaagtccaggaggagaagattcagcttcagaggagcctg
gagagacagaaaggccgtatcctgtctctgtcctggcatccgtctggagctcagctcgcc
gctggaaccatggacatgatcagaatcttcgacgtccagacaggctgtgccacacacagg
ctgctggtggacagaggagtgggaacgtgtagaaaccgagaggtggtggtgtggagcgtc
ctcttcctctctgacagaaccgtcatcagtggggactcggcggggaaggtccagatctgg
gacggagcgacgggaactctgatcaggactcacctggtcaccaaatgggatgttctggct
ctggccgtgtctcaggatgagagcagtgtgatagccggaacctccgagggaaccgtggtc
cagttccagttcctgccctccaccatgggacagcaggagaaggagtgggtcagaaccagg
acctttaagaaccactcgcatgacgtgagggcgctgatccacacagacactgctgtggtc
tctggaggtatggacactcagctggtggtgcgacctctcctggacaaagtggagaagaac
acacaggaatcgtcgatgaggaaaatccttttccctcacaagcctctggtggactgtgct
cacagagcaggtctcctcttgttccagttcactgatcatttagagctgtggaggttgggg
gagagtgaaggacaggggaaacctggtgagagtttaccagtgaagaagaaaccagagaaa
ctgattcacctgaagaagaagggagacgatcacatctgcagcagtgccttgtcatcgtgt
ggaggttggttggtgttctccaccatctgcagcgtcagactctacagagtccagctcagt
aacaacaccgtcagtctcaccaaggtgtccaaacttcccagaatcctttgctgggcccat
cagctgtgtttctcagcggactcctccagactgttcgctgctggcgctcgttcttcagtt
catgtcttttctctcagtcagtctgagtgtaaacacattcacacactgagaccaaagtca
gggtccaggcagccgctccacctgctctgtgtcagtcaggacggtcactggttagctgca
gctaacacagactgtgaggtcaccgtctatgacctcaaaaccatgaagctccactgtaca
gttccagtctactcttcctgtcccacagccatggcctttcatccagtctacaacaacctg
ctgatgactcatgctgaccagcagctgagtgagttctcggtgcagcagcgctcgtacaca
gagtggagtcgagctctgcaccgacgaggtcttcaccctttgtggctgaagagagacaca
cctgtcactcacatcaccttcaatcccacaaaccccgcccacatcctcctgcacgacacc
tacatgttctgcatcattgaccagacactgcccctccctgatgaaaagtcagtgctcttc
aaccagatgatgctgaggagtctccctgagtctgagaggatgagacacagccacgccttc
aagatctgcaagaactttcagaacatcctgtgtttcgatttattagaggaccagtctttg
gtggtggtggagcgccccctgctggatatcatgtctcagctgcctgcaccagtgagacag
aagaaatttgccacataa
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