KEGG   Cynoglossus semilaevis (tongue sole): 103379997
Entry
103379997         CDS       T04866                                 
Symbol
wdr61
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103379997 (wdr61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csem03019]
    103379997 (wdr61)
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     103379997 (wdr61)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EML WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_EIPR1 eIF2A Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Ge1_WD40 PROPPIN NBCH_WD40 Beta-prop_HPS5 Cytochrom_D1 Beta-prop_WDR75_2nd WD40_like WDR54 Beta-prop_VPS8 VPS8_N WD_LRWD1 DUF2415 Vgb_lyase Beta-prop_IFT122_2nd Nucleoporin_N
Other DBs
NCBI-GeneID: 103379997
NCBI-ProteinID: XP_008309975
LinkDB
Position
6:complement(7990501..7994851)
AA seq 305 aa
MSTQYSILFKQEHAHDDAIWTAAWGKSESDGSETIVTGSLDDMVKVWKWSDEKLELQWTL
EGHQLGVVSVDISHNGAIAASSSLDAHIRLWDLESGKQIKSMDAGPVDAWSVAFSPDSKY
IATGSHLGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF
SPDDTHFVSSSSDKSVKVWDASSRACINTFFDHQDQVWSVKYNSTGSKIISAGDDRAIHI
YDCPM
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcactcaatatagcatccttttcaagcaagagcatgcacacgatgatgccatatgg
acagcagcttggggtaaaagcgagtcggatgggtcagaaactatcgtcacaggttcatta
gatgacatggtgaaagtctggaaatggtcagatgagaagctggagctccagtggactctg
gagggacaccagctgggtgtggtgtcagtagacatcagtcataatggagccattgctgcc
tccagctccttggatgctcacatccgtctgtgggacctggagtctggaaaacagatcaag
tccatggatgctggaccggttgatgcctggtcagttgccttctcaccagactctaaatac
atcgccacaggaagccatcttggcaaggtcaacatctttggtgtggaaagtggcaaaaaa
gaatactccctggatactcgaggaaaattcatcctgagtatagcatacagccctgatggt
aaatatttggccagtggtgccattgatggaatcatcaacatctttgacatcgccacagga
aaactcctccacacgctggaaggtcacgccatgcccatcagatccctcaccttctccccc
gactcccagctcttggtcacggcctcagacgacggatacatcaagatctatgacgtgcaa
catgctaacctggctggaacactgagtggacatggatcctgggttttaaatgttgctttt
tcgccagatgacacacactttgtctcgagctcatctgacaagagtgtaaaggtgtgggat
gccagctccagagcctgtatcaacactttcttcgatcatcaagatcaggtatggagtgtg
aagtacaacagtaccggctccaagatcatctcagctggagacgaccgcgccatccacatc
tatgactgccccatgtga

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