Cynoglossus semilaevis (tongue sole): 103379999
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Entry
103379999 CDS
T04866
Symbol
sin3a
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
103379999 (sin3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csem03036
]
103379999 (sin3a)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
103379999 (sin3a)
REST complex
103379999 (sin3a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
103379999 (sin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
103379999
NCBI-ProteinID:
XP_008309977
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All DBs
Position
6:complement(8011424..8026450)
Genome browser
AA seq
1288 aa
AA seq
DB search
MSNTRSLSSHEHEFIMKRRLEDQETVFASQQRRLAGNTEAFQHRVLAPAPTPAVYEAVSD
NMQPTGGVQYSVPQGYQVPTVSQNSGGHGHTPSPAIHGGSHHHSPSVQSHGASVMSGHSH
SAAPQASAQGQQQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGV
INRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDLVNVTTPSQIHHITPHGISVQNLPLP
AAAAQHQAQLPPAVTTTTPPVLTQPPPAKVSKPLQPQTLTQSSQSNPSIPAYTSPRSPPI
QLHQPLSGTPTGPPMQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRN
AKEAAGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLNKTTAEKVESVR
NDHGGTAKKLQLNNKQRPNQNGCQIRRHPTPGTTPPVKKKPKLLNLKDSPVMEASKHGVG
TESLFFEKVRKALRSTEAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFNWFKNF
LGYREMSHIESYPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVL
NDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLETVQRKLS
RMSAEEQAKFRLDNTLGGSSEVVHRKAIQRIYGDKALDIIDGLKKNPAISVPIVLKRLKT
KEEEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQ
EQASEENASPPTGPQLTLAYEDSQILEDAAALIIHHVKRQSSIQKEDKYKIKQIIYHFIP
DMLFSQRGELSDVEEEEEEEEMDLEEGASKKHNGVPSTGSPSKSKLLFSNTAAQKLRSCD
DAYNLFYINNNWYIFLRLHQTLCSRLLRLYGQAERQIEEEVRERDWEREVLGFKKEKSDN
PAIQLRLKEPMDIEVEDYYSAFLEMVRNLLDGNMEASQYEDSLREMFTIHAYMAFTMDKL
IQSIVRQLQHIVSDEICIQVMNLYLAESSNGATGGSLSTLSSRSSAEVIYQRKGEQLMSE
DNCFKVMFSRNCGQVQLTVELLDTEEENSEEPMEAERWSDYVERYLNPDSTTPELREHLA
QKPVFLPRNLRRIRKYQKGREQLDKEACEGGKKSLEKEKMECMFKLNSYKMVYVFKSEDY
MYRRTALLRAHQSHERVSTRLHNRFQAWVDAWVKEHVTRDMSTETNKWLMGEGREGLLPC
TTARQPEVVHFMNINKYRVKYGTAGKAP
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacacaaggtctctcagttctcacgagcatgagttcataatgaagcgccgactg
gaggatcaggaaacggtttttgcatcccagcagcggcgcctcgctggcaacacagaggct
tttcagcatcgtgtcctggcccctgctcccaccccggcagtgtatgaggccgtgtcggac
aacatgcagcccacaggaggtgtccagtactccgtcccacagggttaccaggttcccact
gtgtcccagaacagtggtgggcacgggcacaccccaagtccagccatccatgggggttcc
caccaccacagtccctctgtccaatctcatggggcttcagtgatgtcaggtcacagtcat
tcagctgctcctcaggcctcagcacagggtcagcagcagttccaaaggctcaaggtggaa
gatgctttgtcttatttggaccaagtgaagctgcagtttggaaaccagcctcaggtctac
aacgacttcttggatataatgaaagagttcaagtcccaaagtatcgacactccaggggtc
ataaaccgagtgtcacagctgtttaaaggacatcctgacctcatcatgggctttaacact
ttcctaccaccgggctacaagattgaggtccaaactaacgatttggtcaacgtgacaacg
cccagtcagattcaccacatcaccccgcatggcatttcagtccaaaacctgcccttacca
gcggcagctgcccaacaccaggcacagctcccacctgcagtaaccaccacaaccccacct
gttttaacacagcctccccctgccaaggtgtccaagcctctccagccccagaccttgaca
cagagcagccaaagcaatccgtccatacctgcgtacacttctccccgctccccacccatt
cagctccaccagccactcagtgggacccccactggtccgcccatgcagaacaaccagcct
gtggagttcaaccatgccatcaactacgtcaacaagataaagaaccgattccagggccag
cctgacatttacaaagccttccttgagattctgcacacctaccagaaggagcagcgtaac
gcaaaggaggcggcaggaaactacacaccagctctgacagaacaggaggtctacgctcag
gtggccaggctcttcaagaaccaagaggacctgctgtcagaatttggtcaatttcttcct
gatgccaacagttcagtgctgttaaacaagaccacagctgagaaggtagagtctgtacgg
aacgaccatggtggcactgccaaaaagctgcagctcaataacaaacagaggcccaatcag
aacggctgtcagatccgtcgtcatccaactccagggaccacgccgcccgtcaagaagaaa
cccaaattacttaatctgaaagattcaccagtcatggaagcgagcaagcatggagtaggc
acagaatctctgttcttcgagaaggtccgaaaagccttgcgaagtacagaggcctatgac
aacttcctgcgatgtctggtcatcttcaatcaggaggtaatctccagggctgaactggtg
cagctggtgctgccatttttaggaaaatttcctgagctgtttaattggttcaagaacttc
ctgggatatcgtgaaatgtctcatatcgaatcttatcctaaagaacgggccaccgagggc
atcgccatggagattgactatgcttcctgtaagagactgggctccagttacagagccctg
cccaaaagctaccagcagcccaaatgcactgggagaactccactatgtaaagaggttttg
aatgacacctgggtgtccttcccctcctggtctgaagactccacctttgtcagttctaaa
aaaactcagtatgaggagcacatctacagatgtgaggatgaaagatttgagctggacgta
gtactggaaactaacctggccactatccgagtcttggagacagtacagcggaagttgtcc
cgaatgtctgctgaagaacaggccaagttccgcttggacaacacactaggtggctcctct
gaggttgtgcatcgcaaggccatccagaggatatacggggacaaagcccttgacatcata
gacggcttaaagaaaaacccagcgatctctgttcccatcgtgttaaagaggttaaagaca
aaggaggaggagtggcgggaagcccaaagaggcttcaacaagatctggagagaacagaat
gagaagtattacctcaaatctctggaccatcaaggcatcaacttcaaacagaacgacacc
aaagtgcttcgatccaagtccctgctaaatgaaatagagagcatctatgatgagcgccag
gagcaggcctcggaggaaaacgccagcccacccacgggtcctcagctgaccctggcctac
gaagacagtcagatcttggaggatgctgctgctctcatcatccatcatgtcaagaggcag
tcgagcattcagaaggaggacaaatacaagatcaagcagatcatctaccacttcatccca
gacatgctgttctcacagcgaggtgagctctctgacgtagaggaggaagaggaggaggag
gagatggatctggaggagggagcatccaaaaagcacaacggcgtgcccagcaccgggagc
ccctccaaatccaagctgctcttcagcaacactgcagcgcagaagctgcgcagctgcgac
gatgcctacaacctcttctacatcaacaacaactggtacatcttcctgcggctgcaccag
acgctgtgctcacgtctgctacgtctgtacggacaggcagaacggcagatcgaagaggag
gtcagggaacgtgactgggagagggaagtcctcggatttaagaaggagaagagtgacaat
ccggccatccagctgagactgaaagagcccatggacatcgaggtggaggattactactct
gccttcctggagatggtcagaaatctgctggacggaaacatggaagcttctcagtacgaa
gactcgctgagggaaatgttcaccatccacgcttacatggccttcaccatggacaagctc
atccagagcatcgttcggcagctccaacacatcgtaagtgatgagatctgcatccaagtt
atgaacctgtacctggcagagagctccaatggggccacaggaggaagcctgtccactctg
tcttcaagaagttctgccgaggtcatctatcagcggaaaggcgaacaactcatgtctgaa
gataactgcttcaaggtgatgttttcgagaaactgtggacaggtgcagctcacagtggag
cttctggacacagaggaggagaactcagaagagccaatggaagcagagcgttggtcagat
tatgtagaacgttacttgaacccagattccaccacacctgagttgagggagcatctcgcc
cagaaacctgtctttcttcccaggaatcttagacgcatccggaagtaccagaagggccga
gagcaactggacaaggaagcctgtgagggtggaaagaaatctctggaaaaagaaaaaatg
gagtgtatgttcaaactcaattcttacaagatggtctacgtcttcaagtcggaggattac
atgtacagacgcacggccctgctgcgagcacaccagtcacatgagagggtgagcacgcgg
ctacacaatcgcttccaggcctgggtggatgcttgggtcaaggagcatgtcacccgcgac
atgagcactgagaccaacaagtggctgatgggggaggggcgcgaagggttattgccttgc
accaccgctcgtcagccggaggttgtacacttcatgaacatcaacaagtaccgcgtcaaa
tacggcacagctggaaaagcaccgtag
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