Cynoglossus semilaevis (tongue sole): 103380018
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Entry
103380018 CDS
T04866
Symbol
rora
Name
(RefSeq) nuclear receptor ROR-alpha isoform X2
KO
K08532
RAR-related orphan receptor alpha
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csem03000
]
103380018 (rora)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
csem03310
]
103380018 (rora)
Transcription factors [BR:
csem03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
103380018 (rora)
Nuclear receptors [BR:
csem03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
103380018 (rora)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
103380018
NCBI-ProteinID:
XP_008310012
UniProt:
A0A3P8UPL4
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Position
6:8540749..8739889
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AA seq
468 aa
AA seq
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MMYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQ
PGEAEPLTPSYGLSANGLTELHDDLSGYMDSHTPDGSKPDSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDFAPGSGFFPYCSFTNGDTSPTVSMAELEHLAQNISKSHMETCQYLREEL
QQMTWQAFLQEEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHL
SEDEIALFSAFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCSRHTEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattttgtgatttcagctatgaaagctcaaatcgagattattccctgcaagatc
tgtggagacaaatcatcaggcatccattatggtgtgataacatgtgaaggctgcaagggc
ttcttcaggaggagtcagcagagtaatgcagcctactcctgcccccgccagaagaactgc
ctgattgaccgcaccagccgcaaccgctgccagcactgccggctgcagaagtgcctggct
gtgggcatgtcacgagatgcggtgaagttcggtcgtatgtcgaagaagcagcgagacagt
ctgtacgccgaggtccagaagcaccggctgcagcagcaacagcgtgaccaccaacaacag
ccgggagaggcggagccactcacgcccagttacggcctctcggccaacggcctcacggag
cttcacgacgacctgagcggctacatggacagtcacactcccgatggcagcaaaccagac
tctgcagtcagcagcttctacctggacatccaaccttctcctgaccagtcaggcctggac
atcaacggcatcaagccggagcccatctgcgactttgcccccggctctggcttcttccct
tactgctccttcaccaacggagacacctcccccaccgtgtctatggctgaactagaacac
ctggcccagaacatctccaagtcacacatggaaacttgtcagtacctgagggaggagctg
cagcagatgacctggcaggcctttctgcaggaggaggtggagagctatcaaagcaagcca
cgagaagtcatgtggcagctgtgtgctatcaaaataacagaggccattcagtatgtggtg
gagttcgccaagcgcatcgatggcttcatggagctgtgtcagaacgatcagatagtgctg
ctgaaagcaggctctttggaagttgtgtttgtcagaatgtgccgtgcctttgactcacaa
aacaacacagtctattttgatgggaaatatgccggacccgatgtgttcaagtcattaggg
tgtgacgacttgatcagctccgtcttcgagtttgggaaaaacttgtgttctatgcacctg
tctgaggatgagatcgccctgttctccgcctttgtgttgatgtctgctgatcgttcttgg
cttcaagagaaggtgaaagtggaaaaattgcagcaaaagatccaactggcccttcagcat
gtcctgcagaagaaccacagagaggacggtatacttacaaagttgatatgcaaagtgtcg
acactgcgagcgctgtgcagtaggcatacagagaagcttacagctttcaaagcaatatac
ccagacattgtgcgtgcccactttccccccttatacaaggagttgttcggatcagacttt
gagcagtccatgcccgttgacgggtag
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