Cynoglossus semilaevis (tongue sole): 103380215
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Entry
103380215 CDS
T04866
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03022
Basal transcription factors
csem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103380215 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
103380215 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103380215 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
csem03400
]
103380215 (gtf2h1)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103380215 (gtf2h1)
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103380215 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
103380215
NCBI-ProteinID:
XP_008310284
UniProt:
A0A3P8V654
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Position
6:12272395..12276752
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AA seq
551 aa
AA seq
DB search
MASLSEEVLLVVKKVRQKKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKVQLQLVLHTGENITFHFANESTAVKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLGGVNNTDQALYNNNKQEVGISGAFLADIRPQTD
GCNGLRYNLTADIIESIFRTYPAVKQKYCENVPHNLTEKEFWTRFFQSHYFHRDRLNTGT
QDIFSECAKQDEKGLKSMVIQGVKNPLLNLLALDDNTLDEGYGVCSPQPSTSVANRTVKE
SSNSAIIKRFNHHSAMVLAAGSRKGETLNDQGSETSSTDGNSRDSDCFHPPVKKAKLQEA
TEYDDLQGENRPKTVPLNLKKSDRYAHGPVPLQSHQYTTSQDIINSVNYIHHEMSNYKPN
LTQVMSSTAASSAIAALSPGGILMQGGAPQAIHQMIPTDIQGELKHLYVAAGELLRHYWS
CFPVNTPFLEEKVIKMKSNLERFQMTKLRPFQEKIQRQYLSTNLTGHLEEMLQAAYNKFH
AWQTRRMMRKT
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactgtcagaggaggtactgctggtggtgaagaaggttcgccagaagaagcag
gatggaacactttatctaatggctgaacgcatagcctggggtccagagggaaaggaccga
tttacagtcagccatctctatgcagatattcgctgtcagaagatcagcccagatggtaaa
gccaaagttcagctccagctggtcctacatactggagaaaatatcacattccactttgcc
aatgaaagcactgcagtcaaagaccgagatgctgccaaagagctgttgcagcagctactg
cccaagtttaagaagaaagccaacaaggagttggaagaaaaaaacaggatgcttcaagag
gatccagtgctgttccagttatataaagatcttgtagtcagccaggtgatcagtgctgag
gaattctgggccaacaggttaggaggtgtaaacaacacagaccaggcactatataacaac
aacaagcaagaagttggtatctctggagctttcctggcagatattagacctcagacagat
ggctgcaatggattaagatataatctgacagcggatattattgaatccatcttcaggaca
tatcctgcagtgaagcagaaatattgtgaaaatgtgcctcacaacctgacagagaaggag
ttctggacacgttttttccagtcccattattttcacagagaccgcctcaacacaggaaca
caggacatattctcagagtgtgccaaacaggatgaaaaggggttaaagtcgatggtgatt
caaggggtgaagaatcctttacttaacctcctggcattggatgacaacaccttagatgag
ggatatggagtttgttcaccacaaccttcgacctccgtcgcgaaccggactgtgaaagag
agcagcaactctgccattataaagcgcttcaatcatcacagtgctatggtgctggcagca
ggctcacgcaaaggagaaacgttaaatgatcaaggcagtgagacgagcagcacggatgga
aactctagagattcagactgttttcatcctcctgtaaaaaaggctaaattacaagaagca
acagaatatgatgatctccaaggggaaaacagaccaaaaacagttccacttaacctcaag
aagtctgacaggtatgctcatggacctgtgccacttcagtcccaccagtacacaacaagc
caggacatcatcaactctgtcaactacatccatcatgagatgtccaattacaaacccaac
ctaactcaggtgatgtccagcacagcagctagttctgccattgccgcactgtctcctggt
ggcatcctcatgcagggaggtgcaccacaagccatacatcagatgatcccgactgatatc
cagggagagttaaaacatctttatgttgctgctggagagttattgagacactactggtcc
tgttttcctgtaaacacaccatttttagaagaaaaggtgataaaaatgaagtcaaatctt
gaaagatttcagatgaccaagcttcgtccatttcaggagaagattcaacgtcagtattta
agtacaaatctcacagggcacttggaggaaatgctgcaggcggcctacaacaagttccat
gcctggcagacgcgtcgtatgatgaggaaaacctga
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