Cynoglossus semilaevis (tongue sole): 103380232
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Entry
103380232 CDS
T04866
Symbol
shprh
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103380232 (shprh)
Enzymes [BR:
csem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103380232 (shprh)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103380232 (shprh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
TPR_10
SAMD1_WH
TPR_12
DUF6033
Motif
Other DBs
NCBI-GeneID:
103380232
NCBI-ProteinID:
XP_008310306
UniProt:
A0A3P8V379
LinkDB
All DBs
Position
1:13824050..13837364
Genome browser
AA seq
1663 aa
AA seq
DB search
MLLQGPVMSSRRKKAPPVRVDEEAKEKLNWNMLDDRKNEVILVDDEDQTLTCSSLPSDPT
PSSSSIFTTKDNTEDECSSSVQFTEELPSTSSEVTGISVSLTLSVVPASKLCHVWRALIG
EFSVRPAWLPSDCKQKSFTLHRIGEQLCLSYSSCEESPGLQLRPDEDTCTAECSLSRIPL
EDLDWMQKRRVVQLCHQVKEDLLKVGIYLLETGLGKPEFLSVGNARLKKANQLMQKLMEY
FYDFIIPEVVENEEEECDTDLERQNVEELYDYVRHLHQRETQDVTYDIQHKALIPVLRPY
QSQAVNWMLKREKYRNSSPKEQSLHFLWRELVTLCGKKVFYNPFTGCLIREFPLAGIEWP
GGILADEMGLGKTVEVLALILFHTRQDLEQEVLTLPEGKSVNYFVPPPPLERKTVCKSEV
QPKMKISHPTVRIMLLTAIKEMRSGKGASVNAVFTYIRATYGYDLLKNRNHIKKTLNKLI
DEGLVNRVKGRGLAGSFKLGKNYKETKKMLSTPSKSISKSTESSPRKMFQRRAKEKAEAA
LHSSLTEDEGDLSLLTSDCAAPVEKERKEQWNEAAGEKTEQHDDTLDVSASSLDVSLDKI
DSMDMSRMDDIVERQREDPCLVETEPPTRASAVPFNTPDYRFECICGELGIVDYKARVQC
LNCQLWQHAECVNYKEESLDTTPFYCPHCLVAMKPVSTGATLIISPSSICHQWVEEINRH
IRSSTLRVLVYQGVKKHGFIQPHMLAEQDVVITTYDVLRSELNYVDIPHSNSKDGRRFRN
QKRYMAVPSPLVAVEWWRICLDEAQMVECPTAKAAEMALRLASINRWCVSGTPVQRGLED
LYGLVLFLGVDPYWVKYWWHQLLYRPYRHGNTEPLYNVVSQLMWRSAKKDVIDQIQIPPQ
TEEVHWLRFSPVEGHFYHRQHEVCSQDALVKLRKLSDWSLKLGSLDRRTVNTILCPLLRL
RQACCHPQAVRGEFLPLQKSTMTMEELLKSLQKKCRVECEEAHRQLVCALNGLAGIHIIR
GEFVEATEMYREVLRSSEEHKDRLKTDSLQRLHATRNLMELLEAKHPGIPPTLRDDRLSE
EAEQLRQHYMTKYDSEVADAYHALQPVLQNIKELRRKVKVNSPWWLDVIQRAIRCSTDDD
LVSRIKNELTSYKQQASKMSMADKFRDACGLQFLLNSQMQDLMKSQKTVQDAVKNLEGPA
SQKVIDEVTICHLRPMRLPLNNCVFCKADELFVDYESKLFSHTVKGQTAIFEEMIEDEEG
LVDDRLPTTSRGLWAASETERTLKAILSFAKAKRLDPELVEEGNTFMELFENWKKEYKVL
HEYWMVLRNHVSAIDELGMATERLRVRLPDEPKPKLLHIIEPHEVETNRVKLVNDQAVAK
SQLQKKLGQFLYLTNLEKSQDKSTGGLNPEPCPICARPLGQEWAVLTCGHCFCNECISII
VEQYSTGSRRRAIKCAICRQTTSHTEISYVFTTQSSSQDQEIPVKGSHSTKVEAVVRTLK
KIQVTDPGAKCLVFSTWLSVLDIIAKALFDNNMEFSQINGIHKFQENLSSFKYEDKINIL
LLPLHTGSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTKPTFVHRFLIKSTIEE
RMQSMLKTAEKSHTSTAMKHSEAAVLTVADLADLFTDDTEPLE
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgctattacaaggcccagtcatgagcagcagaaggaagaaagcccctcccgtgagggtg
gatgaagaagccaaagagaagctgaactggaacatgctggatgaccgcaagaatgaggta
attcttgtggatgatgaagaccagacactgacctgctcctccctgcccagcgaccccaca
cccagcagctcctctatcttcaccactaaggacaacacagaggatgaatgttcaagctct
gtccagttcacggaagaacttcctagtacgtcctcagaggtcactggtatctcagtctct
ctgacactgtctgttgttccagcatctaagctgtgtcatgtttggagagcgctcattgga
gagtttagtgtccgaccagcatggcttccatcagactgtaagcagaaatccttcacactt
cacaggataggggagcagctgtgtctcagttatagcagttgtgaagagtctccagggctg
cagttgaggcctgatgaggacacatgcacagcagagtgcagcctcagtcgaatcccacta
gaagacctcgactggatgcagaaacggagggtggttcagctctgccaccaggtgaaggaa
gacttgctaaaggtgggaatttacctcctggaaactgggcttggaaaaccagagttcctc
agtgtgggaaatgcccgtctgaagaaagcaaaccaactcatgcaaaagctgatggaatat
ttttatgatttcataattcctgaagttgttgaaaatgaggaggaggagtgtgacacagac
ctggagaggcagaatgtggaggagctctatgactatgtcagacatcttcaccagagggaa
acccaggatgtgacctatgacatccagcacaaggccctgatccctgtgctcagaccatat
cagagccaagctgttaactggatgctgaagagagagaaatacagaaactcatcacctaaa
gaacaatccttacatttcctttggagagagttggtcactctgtgtggaaagaaagttttc
tacaacccttttactggctgcttaattcgagagtttccgttggctgggatcgagtggcct
ggtgggatcctggcagatgagatggggctcggaaagactgtggaagttctggctctcatc
ctgtttcacactcgacaggatctggagcaggaagtgctcaccctgccagaaggaaaatct
gtgaattattttgttcctccaccaccgttagaaagaaagacagtctgcaagtctgaggtc
cagcctaagatgaaaatttcccacccaactgtgcgaataatgctgctcactgcaataaag
gagatgagatctggtaaaggagcctcagtcaatgctgtgttcacttacatccgtgccacc
tatggttatgacctgttaaagaaccgcaaccacatcaagaagacattgaacaagctgatc
gacgaaggcctagtgaacagggttaaaggtcgaggcctggcgggatcattcaagctggga
aagaactacaaggaaacaaagaagatgttgtcgacaccatccaagtctatttcaaaatcc
acagagagctcacccaggaaaatgtttcagagacgagcaaaagagaaggcagaagcagct
cttcacagctctctgacagaggatgaaggagatctgagtcttctgacgtctgattgtgca
gcaccagtggaaaaagaaaggaaggaacagtggaatgaggctgctggtgagaaaacagag
cagcacgatgacacactagatgtgtctgcatcatcattagatgtatcactagataaaatt
gactcaatggacatgtccagaatggatgacatagttgaaagacaaagagaagatccttgc
ctggtagaaacagaacctcccaccagagcttcggcggtgcctttcaacacccccgactac
cgctttgagtgcatctgtggtgaactgggaatcgttgactacaaggcccgcgtgcagtgt
ttgaactgtcagctgtggcagcacgctgagtgtgtgaattacaaggaggaaagtctggac
acgacacctttctattgtcctcactgtctggttgccatgaaaccagtctcaactggagcc
acgctcatcatctcacccagctccatctgccaccagtgggtggaggagataaatcgacac
atcaggtcctccaccctacgtgtgctggtttatcagggtgtaaagaaacatggcttcatc
cagcctcacatgctggctgagcaggacgtcgtcatcaccacctacgatgtgctgcggtct
gaactcaactacgtcgacattccccacagcaacagcaaggacggacggcgattccgtaac
cagaagcggtacatggcagttcccagccccctagtggctgtggagtggtggcgcatctgt
ttagacgaagcccagatggttgaatgtccaactgcaaaggctgctgagatggctctgcgt
ctagcatccatcaatcgctggtgtgtcagtggaactcctgtccagagaggtttagaagat
ctgtatggtcttgttcttttcttgggagttgatccttactgggtaaagtactggtggcac
cagctgctctatcggccttatcgccatggaaacacagaacctctgtacaacgtcgtctct
cagttaatgtggcgatcagccaaaaaagacgtcatcgatcagatccagattccccctcag
acagaggaggttcactggttgcgtttctctcctgttgagggtcacttctatcaccgtcag
catgaagtctgctcacaggacgctctagtcaaactcaggaagctctccgactggagcctg
aagcttggcagcctggaccgtcgtaccgtcaacaccatcctgtgtccactgctgcgtctg
cgtcaggcctgctgccacccacaggcagtgaggggggaattcctgcctctgcagaaaagt
accatgacaatggaggagctgctaaagtccctgcagaaaaaatgtcgagtggaatgtgaa
gaagcacacagacaattggtgtgtgcactcaatggcctggctggaattcacatcatcaga
ggtgaatttgtagaagccacagagatgtatagagaagtgctgcgctcatcagaggagcac
aaggacagactgaagacggattctttacagcgacttcacgcaacccgtaacttgatggag
ctgctggaggcaaagcaccctggtattccgccaacgctgagagacgatcgactcagtgag
gaggctgagcagctccgacagcactacatgaccaaatatgactctgaggtggcagatgct
taccatgctctgcagccagtgttacagaacatcaaggagctcagacgcaaagtcaaagtc
aactccccctggtggctggatgtgattcaacgggcgatccgctgctccactgacgacgat
ctagtgtctcgcattaagaatgagctgaccagctacaaacaacaggccagcaaaatgtcc
atggctgacaagttccgcgacgcctgtggtttgcagttcctgctcaactcacagatgcag
gatctgatgaaatcccagaagactgtgcaggacgcagtgaagaatcttgaaggtcctgct
tctcagaaagtgattgatgaggtcaccatttgtcacctcaggcccatgaggctgccactg
aacaactgcgtcttttgcaaagcagatgaactttttgtggattatgagtctaagctcttt
tctcacacagtgaagggtcaaacggccatctttgaggagatgattgaagatgaagaaggg
ctggtggacgaccgtctgcccaccaccagtcgaggtctgtgggcagccagtgagaccgag
cgaactctgaaggccattctgtcttttgccaaagccaagcgtttggatccagagctggtg
gaagagggaaacactttcatggaactatttgagaactggaagaaagagtacaaggttcta
cacgagtactggatggttctgaggaatcacgtgtcggccatcgatgagttgggaatggct
acggagaggctacgtgttcgcctaccggacgagccaaagccaaagctgctgcacatcatc
gagccacatgaggtggagaccaacagagtgaagctggtcaacgaccaggccgtggccaag
tctcagcttcagaagaaactgggccaatttctgtacctcacaaacctggagaagtctcag
gacaagtctactggaggactgaaccctgagccgtgtcctatctgtgctcgaccactaggg
caggaatgggcagtgctgacctgtggccactgcttctgtaacgagtgcatctccatcata
gtggagcagtacagcactggctccaggcgacgtgccatcaagtgcgccatctgtaggcag
actacgtcacacactgagatctcctacgtgtttaccacacagtcatccagccaggaccag
gagatcccagtgaagggaagccactccactaaagtggaggcggtggtgagaacactgaag
aagattcaagtgaccgaccctggggccaagtgtctggttttctccacgtggctgagtgtt
ctggacatcatcgccaaggccttgtttgacaacaacatggagttttcacaaataaatggc
atccacaaatttcaggagaatctgagctcgttcaaatacgaagacaaaatcaacattctt
ctccttcctctccacacgggctccaacggcctgaacatcatcgaagctactcacgtgttg
ctggttgaacccatcctcaacccagctcatgagctccaggccatcggccgagttcaccgc
attggtcaaaccaaaccaacatttgttcatagatttctgatcaagtcaaccattgaagag
agaatgcagtcgatgctgaaaacagctgagaagagtcacaccagcacagccatgaagcac
tcggaggctgcagtactgacagtggccgacctcgctgatctgttcaccgacgacactgaa
cctctggagtga
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integrated database retrieval system
