Cynoglossus semilaevis (tongue sole): 103380265
Help
Entry
103380265 CDS
T04866
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03420
Nucleotide excision repair
csem04115
p53 signaling pathway
csem04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103380265 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
103380265 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
103380265 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103380265 (ddb2)
03400 DNA repair and recombination proteins [BR:
csem03400
]
103380265 (ddb2)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103380265 (ddb2)
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103380265 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_C
EIF3I
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
103380265
NCBI-ProteinID:
XP_008310348
UniProt:
A0A3P8V7Q1
LinkDB
All DBs
Position
6:12889932..12893545
Genome browser
AA seq
499 aa
AA seq
DB search
MKRRPAESVSVGSKGRGNKQNIDADNAGPTLSKKLRNKKDGETSKQVHCRTPTSTGTQRR
PVPGNILHYIYRSTLGQSLQSQMRQCLQEPFVRLLSSYHFHGAVSPFDRRITCLEWNPIH
PTTMAVGSKGGDICLWDFQAPAEKTFIQGNGAGDFIGGMKFCPKDLSRVYVASGEGKLTV
QSFEGLPPTTLSTTEDCGHDHHNVCYWYCCVDVSVSRQMLVTGDNMGQLVLLGLDGKKIF
SDKLHKAKVTHAEFNSRCDWLLATASVDHTVKLWDLRNIKDKTSFLHNMPHEKAVNSAYF
NPLDCTKLLTTDQYDQIRVYSSPDWSKPQHIIQHPHRQFQHLTPIKATWHPVYDLIVAGR
YPDDRVHSGDLRTIDIYDSNTAELVCQLHDPTAAGIKSLNKFNPLGDVIGSGMGVTVLVW
KKEDSLTSNGLVQQQEEGGASTSVGSQAQRRRGSQQRSGRERKGPAADAKLKKKLASLEE
CQIKTKNNTKQKQTQSKKK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggcgacccgcggagtcagtttcagttggatcaaagggaagaggaaataagcaa
aacattgacgctgacaacgctggtccaactctctccaagaaactacgaaacaagaaagat
ggagaaacctctaaacaagtacattgccgtactcctacatctacaggaacacaaagaaga
cctgtacctggcaacatcctgcactacatctacagaagcaccctgggacaaagtctgcaa
tcacaaatgagacagtgccttcaggagccctttgttcgtttactgtcatcatatcatttc
catggtgctgtcagcccatttgaccgcaggatcacttgtctggagtggaatcccattcac
cccactacgatggctgtagggtccaaaggtggagacatttgtttgtgggactttcaggct
cctgcagaaaaaacctttattcaggggaatggtgcaggagactttataggagggatgaag
ttttgccccaaggacctttccagagtctatgtggcctctggtgagggtaaactgaccgtg
cagagctttgagggcctcccacccaccacgctgtccacaactgaagactgtggtcatgat
caccataatgtttgttactggtattgctgtgtggatgtgtctgtgagccgacagatgctc
gtgacaggagacaatatgggtcagctggtactgctgggcttggatggaaagaagatcttc
agcgacaagttacacaaagccaaagtgacgcacgcagaatttaactcccgttgtgattgg
ttgttggccacagcctcagttgaccacacagtgaagctctgggacttaaggaacataaaa
gacaaaacaagtttcctgcataacatgcctcatgaaaaggctgttaactcagcctatttc
aaccctctcgactgcactaagttgctgaccacagatcagtatgaccagatccgtgtctac
tcgtcccctgattggtcaaagcctcaacatatcatccagcatcctcacagacagtttcaa
catctaacacccatcaaggccacatggcaccctgtctatgacctgattgtggccggccga
taccctgatgaccgtgttcactcaggtgacctacggaccatcgacatttatgattccaac
acagcagagctggtctgtcagctgcatgatcccacggctgcagggattaaatctcttaac
aaattcaatccactgggtgatgtgattggatcgggaatgggtgtgacagtgctggtgtgg
aaaaaggaggattctctgaccagtaatgggctcgtacagcagcaggaggagggcggcgcc
tcaacgtcagtgggcagtcaggcacagagaagaagaggaagtcagcagcgctcgggcagg
gagcggaaaggtcctgctgcggatgcaaagctcaagaagaaactggcttctttggaggaa
tgtcaaatcaaaacaaagaataatacaaaacagaagcaaacgcagtcaaagaagaagtga
DBGET
integrated database retrieval system
