Cynoglossus semilaevis (tongue sole): 103380438
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Entry
103380438 CDS
T04866
Symbol
caprin1
Name
(RefSeq) caprin-1 isoform X2
KO
K18743
caprin-1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103380438 (caprin1)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
103380438 (caprin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
103380438
NCBI-ProteinID:
XP_008310650
UniProt:
A0A3P8W7L2
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Position
6:16895380..16907754
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AA seq
684 aa
AA seq
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MPSAMNANRAVMTASPEVGSAPGSMGSVPLGGQSEVLKQVLCVIEKKVRNMEKKKSKLDD
YQVRKNNGERLNQDQLEALSKFQEVVNNLEFARELQKTFTALGQDIQKVVKKSARREQLQ
REEAEQRRLKTILELQFLLDRLGDETVRQDLKQGLGGSPLTDADLAAFDEFYKLVGPDRD
QSVRFVNQYEEASMHLWDLLEGKDKAVVGTTYKALRETLDQILLSGYFDRVPSHENGVCE
VEEEPAAIAVVSAAEVESTEVEEQNVDPETEIIEEFTEPIAVETTEFVNRQFIPDGTYSG
SEKEQGDEWTTETEAVTALQQLQPVQPATPPVPMEAHPMNLASPVPPTDPLVRKQVVQDL
MAQMQGTYNFMQDSMLEFDGQPIDPAIVSAQPMNPAQNMDLTQMVCPPVHPESRLSQPNV
VPVQPEPSQVPIVSPTPPPMYQTSHTPDPRPSPDSIDPIQTSLSLTSEQPPSSTALPQAS
QAQVFQPVSKAPHSSGINVNAAPFQSMQTVFNLNAPVPPATETEALNQANQYQNSYNQAF
SNQSQHPVEQTDIQTEQLQSVVGAFHSQDQTGGHQPPSQQGPGFGRQPQSFYNSRGMSRG
GPRNARGMINGYRGSSNGFRGAYEGYRPPFNNTPNSGYGQTQFHTPRDYSNGNYQRDGYQ
QNYKRGASQGPRGVSRGSTQAMRS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggcgatgaatgcaaacagagcagttatgactgcaagcccagaggtgggatcc
gctccagggtcaatgggcagtgttccacttggaggacagtctgaagtgttgaagcaagtc
ctctgtgtcattgagaagaaagtgcgtaatatggaaaagaaaaagagcaaactggacgat
tatcaagtcaggaagaataatggggaacgtctcaatcaggaccagctggaggcactctcc
aagtttcaagaagtcgtgaataatttggaatttgccagagagctacagaagacattcact
gccctgggacaagatatccagaaggtggtgaagaagtctgcacgaagggagcagctgcag
cgtgaagaagcagaacagaggaggctgaagacgattttggagctgcagtttctcctggac
cggcttggagatgaaactgttcgacaggacctgaagcagggactgggagggtcaccgtta
acagatgcagacctcgcagcttttgacgagttctacaagttagtgggaccagaccgtgat
caaagtgtcaggtttgtcaaccagtatgaagaagcatcaatgcacctctgggacctgttg
gaagggaaggacaaggctgtggttggaacaacatacaaggcactgagagagactttggac
cagattctgctgagcgggtactttgacagggtcccatctcatgaaaatggagtttgtgag
gtggaagaggagccagcagctatagcagtggtgtcagcagcagaagttgaatcgacagag
gtagaggagcagaacgttgatccagaaactgaaataatagaagagttcacggagcccatt
gcagtagaaacgacagagtttgtaaatagacagttcattccagacggcacatacagtggc
agtgagaaggagcagggggatgagtggaccacagaaacagaggcagttactgctttgcag
cagctgcagcccgtgcaacctgcaaccccccctgttcccatggaggcccatcccatgaat
ttagcatctcctgttcctccgactgaccccctggtcagaaagcaggtggtgcaggatctt
atggcacagatgcaggggacgtacaacttcatgcaggactcaatgctggagtttgacggt
cagcccattgaccctgccattgtctcggcacagcccatgaatcctgctcagaacatggac
ctgacacagatggtgtgccctcctgttcacccagagtccaggctttcccaacccaacgtt
gttcctgttcaacctgagccatcgcaagttcctattgtctcccccacaccacctcccatg
tatcagacctcacacacaccagatcctcgaccgtcacctgactccatcgaccccattcag
acctcactgtccttgacatcagagcagcctccctcctccacagcgctcccccaggcctct
caggcacaggttttccagcccgtctccaaagctcctcacagcagtggtatcaacgtcaac
gcagcaccattccagtcaatgcagacggtgttcaacctcaatgccccggtcccaccagcc
actgagacagaggccctaaaccaggccaaccaataccagaacagctacaaccaggccttc
agtaaccagtcacagcatcctgtggagcagacggatattcagacagaacagctgcagtct
gtagtcggtgcttttcattcacaagaccagacaggtggtcatcagccaccgtctcagcag
ggcccaggcttcggcaggcagcctcagtccttctacaacagcagaggcatgtcccgcggt
ggacctcgtaatgccaggggtatgatcaacggttacagaggctcatccaatggtttccga
ggtgcctatgaaggctatcgtcctcccttcaacaacactccaaactctggttatgggcag
actcagttccacacgccccgggactactccaatgggaattatcagagggatggttaccaa
cagaactacaagcgtggagccagtcagggtcccagaggagtgtcgagaggcagcactcaa
gcaatgcgctcctga
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