Cynoglossus semilaevis (tongue sole): 103380760
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Entry
103380760 CDS
T04866
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04140
Autophagy - animal
csem04148
Efferocytosis
csem05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103380760 (vps18)
04148 Efferocytosis
103380760 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103380760 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103380760 (vps18)
Membrane trafficking [BR:
csem04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103380760 (vps18)
Hops complex
103380760 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
Vps39_2
Apolipoprotein
DUF5600
zf-RING_16
zf-C3HC4_2
zf-RING_11
DUF1664
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-rbx1
Hemerythrin
KNOX2
DUF4446
zf-RING_2
DUF2175
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
103380760
NCBI-ProteinID:
XP_008311059
UniProt:
A0A3P8WZV4
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All DBs
Position
7:3870058..3874920
Genome browser
AA seq
982 aa
AA seq
DB search
MASILDEYEDSQNSRQSAQHHSRLSSTNIGIAHSGFVNVRLEEEKPIFNKQRIDFTPPEK
INHLAVCNSQLCMSLGKDTLLRIDLAKPEQPNQIELGRKDDSRVYKLFLDPTGSHVLISL
STSECLYLNRNTQKARSLSRWRGHLIESVGWNKLLGNESSTGPILVGTSQGIIFEAEISA
NEGSLFNTNPDQYFRQVHFLEEDGKPAPVCCLEIERGLENKYFIIATTRKRLFQFVGKVA
EGSEQQGFSSIFNQNQDLLPSFQEFPANMGYSEITFYTSKLRTSPKAFAWMMGNGVLYGQ
LDYVRPDSLLSDVQVWEYTPDIDISLNKPISIVLTQFHFLLLLHDRVKAICTLNGQVVYE
DVFPDKYGPLKRMNKDPVGGLIWIYTERAVFRYHIQREARDVWQMYMSMNKFDLAKEYCR
DRPECMDMVLAKEAEHCFQNKRYLESAKCYALTQNYFEEIALKFIEAKQEDALKEFLLKK
LNNLKQSEKTQITLLVTWLTELYLNRLGQLESDGNTIIFQEIRDEFRHFLSSSKYKECLF
NNRSTIYDLLASHGNVEDMVYFSVVMQDYERVISHHCQHDDFSSALDVLSKHCEEKLFYK
FSPVLMQHIPKKVVDAWIQMGKKLDPKKLIPALMNYSQMGSTQQISETIRYMEFCVYELM
VTEEAIHNYLLSLYAKYKPDSLLSYLKQAGTHASEIRYDLKYALRLCAEHGYLRACVLVY
RIMELYEEAVDLALKVDVDLAKSCADLPEDDEELRKKLWLKIAQHVVQEEKDVKKAMNCL
SSCDLLKIEDILPFFPDFVTIDHFKEAICSSLKEYNQHIEELKQEMEEATESAKKIREDI
QEMRNKYGVVDSQEKCASCDFPLLNRPFYLFLCGHMFHYDCLFQEVTPHLSAYKQSRLED
LQKKLAATTQSSKSRHRPLPKDEGDTASLGKGNAGTSRDQIKSDIDDIIASECVYCGEHM
IKSIDKPFIDPQKCEEEKSSWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaattctcgacgagtacgaagactcacaaaattctaggcaaagtgcgcagcat
catagccgcttgtcgagcaccaacatcggtatagcacattcgggctttgtaaatgtgaga
ctcgaggaagagaaaccgatattcaataagcagaggatcgacttcactcctccagagaag
atcaaccatctcgcagtctgcaacagtcagctatgcatgagtttgggaaaggacaccctg
ctaaggattgacttggccaaacctgaacaacctaatcagattgaattaggaaggaaagac
gacagcagagtttacaaattgttcctagatcccacaggttctcatgtgctgatcagccta
agcaccagtgagtgtctgtaccttaacagaaacacccaaaaggcacgtagtctgtcccgg
tggagaggacacctcattgagagtgttggctggaacaagctgctcggcaatgagtccagc
actgggcctatcctagttggcacaagccaagggatcatctttgaagctgagatctctgca
aatgaaggcagccttttcaacaccaatcctgaccagtacttcagacaggtccacttcttg
gaagaggatggtaaaccagcgcctgtctgctgtctggagattgaacgtggcttggaaaac
aagtatttcatcatagccactactcgcaaacgcctttttcagtttgtcggtaaggtggct
gaggggtcagagcagcaaggcttcagctccatcttcaaccagaaccaggacctgctgcca
agttttcaggagttccctgccaatatgggctacagtgagattacgttctacacctcaaag
ttacggacgtccccaaaggcatttgcgtggatgatgggtaatggtgttctttatggtcag
ctggattacgtgaggccagattctcttctcagcgatgtgcaggtgtgggagtacactcca
gacattgacatcagtctcaacaagcccatctccattgtgctgacgcagttccatttccta
ttattgcttcatgaccgggtgaaagcaatctgcaccttaaatggtcaggttgtttatgag
gatgtgttcccagataaatatgggcctctcaagaggatgaacaaggaccctgttggtggg
ttgatatggatctacacagagcgggcagtcttccggtaccacatccagcgtgaggccaga
gatgtgtggcagatgtacatgagcatgaataagtttgatctggcgaaggagtactgccgt
gacaggcctgagtgcatggacatggtactggccaaggaggctgagcactgctttcagaat
aagcgctacctggagagcgccaagtgctatgcactgacacagaactattttgaagagata
gcacttaagtttattgaggccaaacaggaggatgcattgaaggaattcttgctaaagaag
ctgaataatttgaaacagagtgagaaaacacagataaccttgctagtgacctggctaacc
gagctctacctgaaccgacttggccagctggagagtgatggtaacactattatctttcag
gaaatccgtgacgagttccgtcacttcctcagcagctctaaatacaaggagtgcctgttc
aacaaccgcagcaccatctatgatctgctggccagtcatggcaatgtggaggacatggtt
tacttctctgttgtcatgcaggattatgagagagtgatatcccatcactgccaacatgac
gactttagctctgccctggacgttctttccaagcactgtgaggaaaagcttttttacaag
ttctcacctgtcctcatgcagcatattcccaagaaagtggttgatgcctggattcagatg
ggaaaaaagttggacccaaaaaagctcatcccagctctgatgaattatagccagatgggc
agcactcagcagatcagtgaaacgatccgttacatggagttctgtgtttacgaactcatg
gtaacagaggaggcgatccataactacctgctgtcgctttacgcaaagtataagccagac
tctctactgtcttatttaaagcaggcgggcacacatgcttcagagatacgctatgacctg
aagtatgccctcaggttgtgcgcagaacatggctacctccgggcttgtgtcttggtttat
aggataatggaactatatgaagaagcagtggatctggctttaaaagtagatgtagactta
gccaagtcgtgtgccgatctccctgaagacgacgaggaacttaggaagaagctttggcta
aaaattgcccagcacgttgtgcaagaggaaaaagatgtgaaaaaagccatgaactgtctt
tctagttgcgacctgctgaagattgaagatatcttgccatttttcccagactttgtcacc
attgaccattttaaggaggccatctgcagctccctgaaggagtacaaccagcacatcgag
gaacttaagcaggaaatggaggaggctactgaaagtgccaaaaaaatcagagaagacatt
caggaaatgaggaacaaatatggagtggtggattcccaagaaaagtgtgcttcttgtgac
ttcccattgctcaacaggcccttctatctatttctatgtggacacatgttccactatgac
tgtctgttccaggaggtaacacctcatttgtcagcttacaagcaaagtcgtctagaggat
ctgcagaagaagctggctgcaactacacaatcctccaagtcacgccatcgcccattgccg
aaggatgagggtgacactgccagtctgggaaagggcaatgcaggcacaagtcgtgatcag
ataaaatcagacattgacgacatcattgcgtctgaatgtgtgtactgtggagaacatatg
atcaaatccattgacaagcctttcattgatccacagaaatgtgaggaggagaaatcaagc
tggttatga
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