KEGG   Cynoglossus semilaevis (tongue sole): 103381084
Entry
103381084         CDS       T04866                                 
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103381084 (hbs1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csem03019]
    103381084 (hbs1l)
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103381084 (hbs1l)
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N GTP_EFTU_D2 MMR_HSR1 AAA_22 DO-GTPase2 Pept_tRNA_hydro
Other DBs
NCBI-GeneID: 103381084
NCBI-ProteinID: XP_008311501
LinkDB
Position
7:9161537..9180183
AA seq 825 aa
MDTNTMRLSTFMQRKRKQTFRGVRKEKTNKGFWEKKVSRSKYTKQNSNAMFGNPTSFKNF
NGSTISRAHWRKIKRRKLVIILSEISFRIGTQHQQEKWQPCCEAHVVTFCELQNTVDGAE
RRHIGTMSRHRNVRGYNYDEDFEDDDIYGQSVDDDYCISPATANQFIYSRQERQAPKEEP
LEEEEGECEEEDAFMSPSSSHNLDPLDQAKLFSCLDHMRTVLGDAVPDSVLSKAAIKHDF
DPQKALDAVLSEDTKPTPVAEGTTEAAFAPRVTPGLAPLPQRTKRGSAAEKAKSRDETPS
KVDSEVVPKVARMTVSGKKQTLGFDVPSTEENGVTSVSTRRGGSPETAPVTEVTSKRPET
PSKGPNADEASTVPTPSRSAGKSRQTINVKAELEKRQGGKPLVNLVVIGHVDAGKSTLMG
HLLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSK
VVTLMDAPGHRDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGV
TQLAVAVNKMDQVNWQQDRFQEITTKLGHFLKQAGFKESDVFYIPTSGLSGENLTTRSSV
SELTSWFSGPSLLEQIDAFKAPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGD
RILAMPPNETCNVKGITLHDEPLDWAAAGDHVSLTVTGMDIIKINVGCVFCDPKEPIKVC
TRFKARILLFNIEVPITQGFPVLLHYQTVSEPATIRKLVSVLHKSSGEVLKKKPKCLTKG
MNAIVEIQTQRPVSLELYKDYKELGRFMLRYVGSTIAAGVVTEIK
NT seq 2478 nt   +upstreamnt  +downstreamnt
atggatacaaataccatgaggttatccacatttatgcaaagaaaaagaaaacaaacattc
agaggagtcagaaaggaaaaaactaacaaaggattttgggaaaagaaggtgtccagaagt
aaatatacaaaacaaaacagtaatgcaatgtttgggaatccaacctcttttaaaaatttt
aatggatcaactatatctcgggcacactggagaaaaatcaaacgtaggaagttagttatc
attttgagtgaaataagcttccgtatcggcacacaacatcagcaggagaaatggcagccg
tgctgtgaggcacatgttgtcactttttgtgagctgcaaaacactgtcgacggggccgag
agacgacacataggcaccatgtctcggcacagaaatgtccggggttacaactacgatgaa
gacttcgaggacgatgacatctacggacagtctgtggatgatgattactgtatatcacca
gcaacagcaaatcagttcatctactcacgtcaggagagacaagcaccaaaagaggagcct
ttagaagaggaggagggagagtgtgaagaagaagatgcttttatgtctccatcttcaagc
cacaaccttgaccctcttgatcaagccaagctgttctcctgtctggatcatatgcgaaca
gtcctgggagatgcagttcccgactcagttctgagtaaggcagccattaagcatgatttt
gacccacaaaaggcgttggatgcagtcctgtcagaagacactaaaccaaccccggttgca
gaaggtactactgaggcagcttttgcaccaagagttaccccagggttagcgccgctgcca
cagagaaccaaacgagggtctgctgcagagaaagctaaaagcagagatgagactccaagc
aaagtggactctgaggtggttcccaaagtggctcgcatgactgtgtcaggcaagaagcag
actctgggctttgatgttccaagcacagaggagaacggcgtcaccagtgtctcaactcgc
cgtggtggcagtccagaaactgcaccggtcacagaagtcacctccaagcgcccggagacc
ccgtctaaagggcccaatgctgatgaggcctccacagttcccactccaagccgctctgct
ggaaaatcccggcaaaccatcaatgtgaaggccgagctggagaagaggcaggggggaaaa
cccctggttaatttagttgttattggtcatgtggatgcaggtaaaagtacactgatgggc
cacctgctttatctgctgggcaatgtcaacaaacgcaccatgcacaagtatgagcaggag
tcgaagaaggcagggaaggcttccttcgcctatgcttgggtcctggatgaaactggagag
gagagggacaggggggtgaccatggacgtggggatgacaaagtttgagacaaactctaaa
gtggtgactctgatggacgcacctggacacagggacttcatccccaacatgatcacagga
gctgcacaggcggatgttgcagtgctggtggtggatgccagcaggggagagttcgaggcg
ggcttcgaggcaggcggtcaaaccagagagcatgctctcctggtgcgatcgctgggcgtc
actcagctcgctgtcgccgtcaacaagatggaccaggtaaactggcaacaagatcgattt
caagaaatcacgaccaaactgggtcattttctcaagcaggcaggatttaaggagtctgat
gttttctacatcccaaccagtggcctttcaggagagaacctgaccactaggagttcagtt
tcagagctcacctcctggttttctggtcccagcctgttggaacaaatcgatgccttcaaa
gcgcctcagaggtccatagacaaaccgttcagactgtgtgtctcagacgtgttcaaagac
cagggatcgggcttttgtgttacaggcaagattgaagctggatacattcagaccggagac
agaattctggccatgcctcccaatgaaacctgcaatgtcaaaggaattacactacatgat
gagcccctagactgggctgcagcaggagaccacgtgagcctgacggtcacaggcatggat
atcatcaagatcaatgtgggctgcgtgttctgtgatcccaaagagccgattaaagtctgt
actcgattcaaggccagaatcctcctcttcaatattgaggtccccatcactcagggcttc
cctgtgttgttgcattaccagacggtcagtgaaccagccaccattaggaaactagttagc
gtgctccataaaagcagcggtgaagtccttaaaaagaaaccaaagtgtttaactaaaggc
atgaacgccattgtggagatccagacacagagaccggtgtcattagagctgtataaggac
tacaaggaattgggccgcttcatgctgcgatatgtgggctccaccattgctgcaggagtt
gtcactgagatcaaatga

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