Cynoglossus semilaevis (tongue sole): 103381084
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Entry
103381084 CDS
T04866
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103381084 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103381084 (hbs1l)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103381084 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Pept_tRNA_hydro
Motif
Other DBs
NCBI-GeneID:
103381084
NCBI-ProteinID:
XP_008311501
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Position
7:9161537..9180183
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AA seq
825 aa
AA seq
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MDTNTMRLSTFMQRKRKQTFRGVRKEKTNKGFWEKKVSRSKYTKQNSNAMFGNPTSFKNF
NGSTISRAHWRKIKRRKLVIILSEISFRIGTQHQQEKWQPCCEAHVVTFCELQNTVDGAE
RRHIGTMSRHRNVRGYNYDEDFEDDDIYGQSVDDDYCISPATANQFIYSRQERQAPKEEP
LEEEEGECEEEDAFMSPSSSHNLDPLDQAKLFSCLDHMRTVLGDAVPDSVLSKAAIKHDF
DPQKALDAVLSEDTKPTPVAEGTTEAAFAPRVTPGLAPLPQRTKRGSAAEKAKSRDETPS
KVDSEVVPKVARMTVSGKKQTLGFDVPSTEENGVTSVSTRRGGSPETAPVTEVTSKRPET
PSKGPNADEASTVPTPSRSAGKSRQTINVKAELEKRQGGKPLVNLVVIGHVDAGKSTLMG
HLLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSK
VVTLMDAPGHRDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGV
TQLAVAVNKMDQVNWQQDRFQEITTKLGHFLKQAGFKESDVFYIPTSGLSGENLTTRSSV
SELTSWFSGPSLLEQIDAFKAPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGD
RILAMPPNETCNVKGITLHDEPLDWAAAGDHVSLTVTGMDIIKINVGCVFCDPKEPIKVC
TRFKARILLFNIEVPITQGFPVLLHYQTVSEPATIRKLVSVLHKSSGEVLKKKPKCLTKG
MNAIVEIQTQRPVSLELYKDYKELGRFMLRYVGSTIAAGVVTEIK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaataccatgaggttatccacatttatgcaaagaaaaagaaaacaaacattc
agaggagtcagaaaggaaaaaactaacaaaggattttgggaaaagaaggtgtccagaagt
aaatatacaaaacaaaacagtaatgcaatgtttgggaatccaacctcttttaaaaatttt
aatggatcaactatatctcgggcacactggagaaaaatcaaacgtaggaagttagttatc
attttgagtgaaataagcttccgtatcggcacacaacatcagcaggagaaatggcagccg
tgctgtgaggcacatgttgtcactttttgtgagctgcaaaacactgtcgacggggccgag
agacgacacataggcaccatgtctcggcacagaaatgtccggggttacaactacgatgaa
gacttcgaggacgatgacatctacggacagtctgtggatgatgattactgtatatcacca
gcaacagcaaatcagttcatctactcacgtcaggagagacaagcaccaaaagaggagcct
ttagaagaggaggagggagagtgtgaagaagaagatgcttttatgtctccatcttcaagc
cacaaccttgaccctcttgatcaagccaagctgttctcctgtctggatcatatgcgaaca
gtcctgggagatgcagttcccgactcagttctgagtaaggcagccattaagcatgatttt
gacccacaaaaggcgttggatgcagtcctgtcagaagacactaaaccaaccccggttgca
gaaggtactactgaggcagcttttgcaccaagagttaccccagggttagcgccgctgcca
cagagaaccaaacgagggtctgctgcagagaaagctaaaagcagagatgagactccaagc
aaagtggactctgaggtggttcccaaagtggctcgcatgactgtgtcaggcaagaagcag
actctgggctttgatgttccaagcacagaggagaacggcgtcaccagtgtctcaactcgc
cgtggtggcagtccagaaactgcaccggtcacagaagtcacctccaagcgcccggagacc
ccgtctaaagggcccaatgctgatgaggcctccacagttcccactccaagccgctctgct
ggaaaatcccggcaaaccatcaatgtgaaggccgagctggagaagaggcaggggggaaaa
cccctggttaatttagttgttattggtcatgtggatgcaggtaaaagtacactgatgggc
cacctgctttatctgctgggcaatgtcaacaaacgcaccatgcacaagtatgagcaggag
tcgaagaaggcagggaaggcttccttcgcctatgcttgggtcctggatgaaactggagag
gagagggacaggggggtgaccatggacgtggggatgacaaagtttgagacaaactctaaa
gtggtgactctgatggacgcacctggacacagggacttcatccccaacatgatcacagga
gctgcacaggcggatgttgcagtgctggtggtggatgccagcaggggagagttcgaggcg
ggcttcgaggcaggcggtcaaaccagagagcatgctctcctggtgcgatcgctgggcgtc
actcagctcgctgtcgccgtcaacaagatggaccaggtaaactggcaacaagatcgattt
caagaaatcacgaccaaactgggtcattttctcaagcaggcaggatttaaggagtctgat
gttttctacatcccaaccagtggcctttcaggagagaacctgaccactaggagttcagtt
tcagagctcacctcctggttttctggtcccagcctgttggaacaaatcgatgccttcaaa
gcgcctcagaggtccatagacaaaccgttcagactgtgtgtctcagacgtgttcaaagac
cagggatcgggcttttgtgttacaggcaagattgaagctggatacattcagaccggagac
agaattctggccatgcctcccaatgaaacctgcaatgtcaaaggaattacactacatgat
gagcccctagactgggctgcagcaggagaccacgtgagcctgacggtcacaggcatggat
atcatcaagatcaatgtgggctgcgtgttctgtgatcccaaagagccgattaaagtctgt
actcgattcaaggccagaatcctcctcttcaatattgaggtccccatcactcagggcttc
cctgtgttgttgcattaccagacggtcagtgaaccagccaccattaggaaactagttagc
gtgctccataaaagcagcggtgaagtccttaaaaagaaaccaaagtgtttaactaaaggc
atgaacgccattgtggagatccagacacagagaccggtgtcattagagctgtataaggac
tacaaggaattgggccgcttcatgctgcgatatgtgggctccaccattgctgcaggagtt
gtcactgagatcaaatga
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