KEGG   Cynoglossus semilaevis (tongue sole): 103381112
Entry
103381112         CDS       T04866                                 
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103381112 (nup43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csem03019]
    103381112 (nup43)
   03036 Chromosome and associated proteins [BR:csem03036]
    103381112 (nup43)
Messenger RNA biogenesis [BR:csem03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103381112 (nup43)
Chromosome and associated proteins [BR:csem03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    103381112 (nup43)
SSDB
Motif
Pfam: WDR55 WD40_Prp19 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_EML WD40 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_IFT140_1st EIF3I WD_LRWD1 WD40_MABP1-WDR62_1st KNTC1_N Utp8_b_propeller Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_WDR75_2nd Beta-prop_Aladin
Other DBs
NCBI-GeneID: 103381112
NCBI-ProteinID: XP_008311545
LinkDB
Position
7:complement(10647287..10649642)
AA seq 372 aa
MESINAKYVSQKISKTRWKPVSHSTLQQPEIFATGSWDNEENKISLWSIGNHENVAMDDG
NEGDPQVLCEHKHDGDVLDLQFLDQDRIVTASSTGAVTIYRHHPNTQTLSVSQHWARAHR
YPCDSAPCTSVVCSSPEIVTVGEDGRIVVFRADHEGVVQTIENADSSTIHAVTYLRTTEI
LTVNSIGQLKMWDLRQHSKSPSQIFSLSGDRVPLHCVDRHPNQQHIVATGGQDGMLCVWD
VRQGNSPFSLMEAHSAEMWEVHFHPTNPDHMFTCSEDGSLLHWETSSQSDLPSFLQGNRN
NSMISRSAMPSAGGNQSIISAWLSGDSSKSRLETTHMLPSQTLSVNSLDVLGHYLVCGTD
GEAIFVHRQIPV
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggagagtataaatgccaaatacgtgtcccagaaaatcagcaagaccagatggaaacct
gtatcgcattcgacgttgcagcaaccagaaatctttgctaccggatcgtgggacaacgag
gagaacaagatttccctctggtccattggaaaccatgaaaacgttgccatggatgatggc
aatgaaggagatccacaggttctgtgtgaacacaaacacgatggtgatgttttagacctt
cagtttctcgaccaagacagaattgtcacagcatcatcaaccggagcagtcaccatctac
cgccaccacccaaacactcagactctctcagtatcacagcactgggcgagagcacatcga
tacccctgtgacagcgccccctgtaccagcgtggtgtgcagcagtcctgagattgtgact
gtcggtgaagatggcaggatcgttgtgttcagagctgaccatgaaggagtggtccaaacg
atagagaatgcagacagcagcaccatccatgcagtgacgtatctgaggaccacagagatt
ttaacggtgaactccatcggacaactcaagatgtgggatctcagacaacacagcaagtcg
ccatcacagattttctccttgtcaggggacagagttcctctgcactgtgtggacaggcat
ccaaaccagcagcacattgtggccacaggaggtcaggacggcatgctgtgtgtttgggat
gtcagacaaggcaacagtcccttctcactcatggaagcacactctgctgaaatgtgggag
gtccatttccatccaaccaacccagaccatatgttcacctgctcagaggatggttcactg
ctccactgggagacatcttcacagtcagatctgccctctttcctacaagggaacagaaac
aacagtatgatctctcgcagtgctatgccatcagctggaggaaaccagtccatcatcagc
gcctggctgagcggagactccagtaaaagccgcctggagacaacacacatgcttcccagc
caaacgctgtcagtcaacagtctggacgtgctcgggcattatcttgtctgtgggactgac
ggagaagctatttttgtccacaggcaaatcccagtgtga

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