Cynoglossus semilaevis (tongue sole): 103381265
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Entry
103381265 CDS
T04866
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103381265 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103381265 (trim54)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103381265 (trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-C3HC4_4
zf-RING_5
zf-RING_6
zf-RING_2
zf-C3HC4_3
TRIM_CC
Sina_RING
Prok-RING_4
CoiA_N
Zn_ribbon_FGT1_2
ANCHR-like_BBOX
DUF1664
Motif
Other DBs
NCBI-GeneID:
103381265
NCBI-ProteinID:
XP_008311755
UniProt:
A0A3P8UV99
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All DBs
Position
7:12748213..12751798
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AA seq
356 aa
AA seq
DB search
MSSTLGVKPPSAGSSGPGAGSRAAMENLEKQLICPVCLEMFSKPVIILPCQHNLCRKCAS
DVLQSANPLWQTRGSTTVAASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYRQQ
ETSRLLNLKPRQQQLMCEEHPEEKINIYCLSCQTPTCSMCKVFGPHMDCDVAPIASVYAT
QKKELSDSIAMLVASNDHILAVITQMEEMCRTLKDNSKRQKEKLVEAFDLLTSILEERKE
EVVGVISKHQDDKLQHVQSLIQRHGEHLEVAVGLVESAIQAMEEQHMSQFIQSANVILEK
VADVSRSSGVALPQLGYECMSHLVLDIDDVTVMLRSLDFSSGVRDDGDDGSEVVDD
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagctccactctgggcgttaaacccccctcagcaggcagctctggacccggtgccggc
agcagggccgccatggagaacctggagaagcagctcatctgtccagtctgcctggaaatg
ttctccaaacccgtcatcatcctgccctgtcagcacaacctctgccggaaatgtgccagc
gacgtcttgcagtcagccaaccctttgtggcaaacccgtggctccaccaccgttgctgcc
agcggcggtcggtttcgctgtccctcgtgtcgccatgaggtggtgctggaccgacatggt
gtctatggtctacagaggaacctgctggtggagaacatcatagacatctacaggcagcag
gagacctccaggctcctgaacctgaagccgcggcagcagcagctcatgtgtgaagaacac
ccggaggagaagatcaacatctactgtttgagctgccagacgccgacctgctccatgtgc
aaagtgttcggtccacacatggactgtgacgtggctcccatcgccagcgtctacgccacc
cagaagaaagaactgagtgacagcatcgccatgttggtcgccagcaatgaccacatcctg
gccgtcatcacacagatggaggagatgtgccgcacactgaaggacaacagtaagcggcag
aaggagaagctggtggaggcctttgacctcctgacctccatcctggaggagaggaaagag
gaagtggtgggtgtgatctccaaacaccaggacgacaaactccagcacgtccagtctctc
attcagagacacggcgaacacctggaggtcgcggtcggcctggtggagtcggccatacag
gccatggaggagcagcacatgtctcagtttatacagagcgccaacgtgatcctggagaaa
gtagcagacgtgtccaggtcctcaggcgtcgctcttccacagttgggttatgaatgtatg
agtcacctggtcctggacattgatgatgtcacagtgatgctgcgcagccttgacttcagc
tccggtgtcagagatgatggagacgatggatctgaagtggtcgacgattaa
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