Cynoglossus semilaevis (tongue sole): 103381391
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Entry
103381391 CDS
T04866
Symbol
vipas39
Name
(RefSeq) spermatogenesis-defective protein 39 homolog
KO
K23287
VPS33B-interacting protein in polarity and apical restriction
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103381391 (vipas39)
Membrane trafficking [BR:
csem04131
]
Endosome - Lysosome transport
Others
Others
103381391 (vipas39)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_C
Motif
Other DBs
NCBI-GeneID:
103381391
NCBI-ProteinID:
XP_016888956
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Position
7:13651752..13657649
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AA seq
485 aa
AA seq
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MKSRTDEEEYWNSSKFKAFTFDDDEDELSTLQESKRAVDSISGLVGGDEDEDQVEIVGWG
GEPVDSIVWSVRETAASTNQRPERESTPQTNTGPSQKSRSQSVYSLSSLFRGKNRGDNFT
IGAEALSDSTTGRLFAPELRKPKSEYKELQRDWSPEETVCRLQQGKVVSLEKFRSLQEKL
LLLDYSVKANDGNVITAVLIFLKKTLSKEILFQELQSRQTALRHFINFLYETEESGLLLE
LLRSLGRTEDAALLQYKEHQSISDESRRRDFLKSCLRPVNPIGFLSHLLERQIIMEETDG
QNERGGKVEIFQKVPRKSSILNMPLVTTVYYACVYHYNEAEGTLSSPHNLRQTFRISEKQ
FFVTALAARAKLKAWSDVDALFFSRNWLGPNRKKPPLAFHRVVDILHKNSAPPKVLQDYV
GLVDDAQLRLSLAHKHKCHDIVINTYRDLKDRQLLLGYRTKVEVGSEADSRISQLLDNPQ
IRWKN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcagaaccgatgaggaagagtactggaacagttccaagttcaaagcctttacc
tttgacgatgacgaggacgaactcagcacgctgcaggagtccaagcgggcggtggacagc
atcagtgggctggtgggcggagacgaggacgaggaccaggtggagatagtgggctggggc
ggggagcccgtggacagcattgtgtggtcggtgagagagacggcggcatcgaccaatcag
aggccagagagagagtccaccccccagacgaacactggtccctcccaaaaaagcaggagc
caatcagtatactcactgagctccctctttagaggaaagaacaggggagacaacttcacc
atcggcgctgaggcgctgagcgactccacgaccggacgactcttcgctccagagctgcgt
aaacctaagtctgaatacaaggagctgcagagggattggtcgcctgaggagactgtgtgc
agactgcaacagggaaaggtggtttctctggaaaagttccgttctctgcaggagaaactg
ttgcttctggattattccgtcaaggccaacgatggaaacgtcatcactgctgttttgata
tttttgaagaagactttaagtaaagagattttgtttcaagagctccagtccagacaaaca
gctctaagacatttcatcaacttcctgtatgagactgaagaaagtgggctgctgctggag
ctcctcaggtctctgggcaggacagaggatgcagcgctgctccaatataaagaacaccag
agtatcagtgatgaaagcaggaggcgggacttcctgaagagctgcctgaggccagtcaat
cccattggtttcctgtctcatctgttggagcgacagatcatcatggaggagacagacgga
cagaacgagcgtggaggaaaagtggaaattttccaaaaggttccgagaaaatcttccatc
ctgaacatgcccctggtcaccacggtgtactacgcctgtgtttaccactacaacgaggcc
gagggaaccctcagtagtcctcacaacctccgtcagaccttcaggatttcagagaagcag
ttctttgtgacggcgttggcggctcgggccaagttgaaggcgtggtctgacgtggacgcc
ctgttcttcagccggaactggctgggcccaaacaggaagaagccaccgctcgccttccac
cgcgtggtcgacatcctgcacaagaactccgctcctcccaaggtccttcaggactacgtt
gggctggtggacgacgcccagctgcggctgtcgctcgcccacaaacacaagtgtcacgac
atcgtcatcaatacgtacagagacctgaaggaccggcagcttttactgggatacagaaca
aaggtggaggtggggtcagaggccgactccaggatcagtcagctgctggacaacccgcaa
atccgttggaagaattga
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