Cynoglossus semilaevis (tongue sole): 103381397
Help
Entry
103381397 CDS
T04866
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103381397 (taf1b)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
103381397 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
DAXX_hist_bd
Motif
Other DBs
NCBI-GeneID:
103381397
NCBI-ProteinID:
XP_016889015
LinkDB
All DBs
Position
7:13773074..13780849
Genome browser
AA seq
552 aa
AA seq
DB search
MNDELTATFTQPCAQCSAVNWAVSDEGRFYCRSCHNVAERTEDVVDTTFTPGSARISNLT
RRSRTRTPDRQWWICEGFQFILKNQADALVDLGVSAHFRDQVLCQLWRLYLQKSRQAFTS
DPIRSSAHQLRITDSDVDSEGESSAVSDSGSGSDWSGVLGNSVHLSESQRQVHTLMNMRR
TLALIHLALVWSRAPLTLSDVIMLVRAGLLPYTDVYEKLPDKLKVEGVDVLTFRVHNVPS
HQELHTEAQALVHFLQLETFPPISSQSQLHPALLSLRYLSDANLPDQLHPWLLHLMKRAA
VEDQTLYTFDSTSCPVLPQHDIQTVAIIIVTIKVVFGLNDCTEWDLCDVDDQSEAVFSLR
RWFRLTQAALRSAEQSRNQLICRTQWKSGCGLYQNRRSRSLGLKRKRTSDQVQRCFQNLS
SPVAARRCSSSSFRFCWGGDDGADGPSLHHQKLTSVLTMNHNMLTPTNATYWLPARCTCY
LDMHKSHFQDMKAWLPHSFLQLLNFFSFLIDVKPTVLFQEVLNLERRLLGHNSRTRTKTR
TRTLGQGTETAT
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaactaacggccactttcacacagccctgcgctcagtgttctgctgtgaac
tgggccgtttcagacgaaggccgtttctactgcagaagctgccacaacgtcgctgagcga
actgaagatgtggtggacaccaccttcactccaggctcagccaggatctccaacctcacc
aggaggtctaggaccagaacaccagaccgtcagtggtggatctgtgaaggctttcagttc
attctgaagaaccaggctgatgctctggtggatctgggagtttctgctcacttcagggac
caggtcttgtgtcagctgtggagactgtaccttcagaagagtcgacaggcgttcacctcc
gaccccatcagaagctccgcccaccaactgagaatcacagactcggatgtggacagtgaa
ggtgagtcatcggctgtgtccgactcaggaagtggcagtgattggtcaggggtgttgggc
aactctgtccatctgtcagagagtcaaaggcaggtacatactctgatgaacatgaggaga
accctggccctgatccacctggctctggtgtggagccgtgcaccgctgacactcagtgat
gtcatcatgttggtgcgggctggtcttcttccatacactgatgtctacgagaaacttccg
gataaactgaaggtggaaggagtggatgtcctgaccttcagagtccacaatgtaccgtcc
caccaggagctgcacaccgaggctcaggctctggttcacttcctgcagctggaaaccttt
cctccaatcagcagccagagtcagctgcacccagcactgctcagccttcgctatctaagc
gatgctaacctacccgaccagctccacccttggctcctccacctgatgaagcgagctgct
gtggaagatcagactctctacacctttgactccacctcctgtcctgtcctgccgcaacac
gacatccagaccgtcgccatcatcattgtcaccatcaaggtggtgtttggcctgaacgac
tgcaccgagtgggacttgtgtgacgtggacgaccaatcagaagctgtgtttagcctgagg
aggtggttcagactgacccaggctgctctcaggtcagctgagcagagcagaaaccagctt
atctgcaggacgcagtggaagtcaggctgtgggctgtaccagaacaggaggtccaggagt
ctgggactgaagaggaaacgaacctcagatcaggtccagcggtgttttcagaacctgtct
tctcctgtcgccgcccgacgctgctccagttccagtttcaggttctgttgggggggtgat
gatggagcagacggtcccagtctgcaccaccagaagttgacttcagtcctgacaatgaac
cacaacatgctgactcccaccaacgccacctactggctgccagctcgctgcacctgttac
cttgacatgcacaagagccacttccaggatatgaaggcgtggcttcctcactccttccta
cagctgctgaacttcttttctttccttattgatgtcaagccgacagttctgttccaggaa
gtcctgaacctggagagacggctgctgggacacaacagcaggaccaggactaagaccagg
accaggaccctgggtcagggaactgagaccgcaacatga
DBGET
integrated database retrieval system
