Cynoglossus semilaevis (tongue sole): 103381520
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Entry
103381520 CDS
T04866
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec24C-like
KO
K14007
protein transport protein SEC24
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103381520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103381520
Membrane trafficking [BR:
csem04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
103381520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
103381520
NCBI-ProteinID:
XP_016889630
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All DBs
Position
8:complement(2385474..2400714)
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AA seq
1252 aa
AA seq
DB search
MNVNQHTPMASPYGQPQSGYTHPGYAPLDGAYPAPYAPYNGPASAYQPGVPPQDYSPFTS
FPSKVVAATPVSDLTSPLDLGPSRGPPTSAPPPVSASQAYHQYSQGNVQNGPPPMTQAPS
RPPVTQSYNQGAVNLSEQHSNYPQQYVPPPTMHQVTNQMSGMQLTPGSPTLAGPGCVPPQ
SSQPPISAPYSAAPPPTYTQAPPPTCSAPTHPPPPSGPVPSQQYYGGQHPPAQHAFNSSL
PPTSQQQFSSHAPPPPPTQQTYPPSSFSGSMPPTSQVPAPPVSQPQQSFPPSQPPFSSAP
PAVSQPAFHAGPPSSAQGSFQPRAPPPSSQPGPFPPPGPSPTSSPTGQYPGPMPPLQQPP
PTQPFPYHSGPPPSRTQMPPTSMAQSNHLPPGPQGPPGPPGPLQQPQPSMQGGYPPQQNG
AYGQVRGPQPGYAGPYPGQPNYGAPGPAPAPAPPSQKRLDPNAIPSPQASDMPAVQKSRH
RIDPDAIPSPIQVIEDDKAKSTEPFTTGVRGQAPPLVTTDFQVKDQGNASPRFIRCTAYN
MPCTSDMAKQSQVPLAAVIKPLATLPQDETPPYLVDHGEGGPIRCNRCKAYMCPYMQFIE
GGRRFQCAFCSCVTEVPPHYFQHLDHTGKRVDCYDRPELSLGSYEFLATVDYCKNNKVPQ
PPAFIFLIDVSYNAVKCGMVRMVCQELKNLIDYLPRENPEVDSVIRVGFVTYNKVLHFYN
VKSTMAQPQMLVVSDVSDMFVPLLDGFLVNVNESRPVIESLLDQIPEMFAETRETETVFG
PVIQAGLEALKAADCAGKLFIFHTSLPIAEAPGKLKNREDKKLIGTDKEKSLFQPQVSFY
NTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPVSTGGSVYKYTYFQTQTDQERFLNDLS
RDVQKLVGFDAVMRVRTSTGIRATDFYGSFFMSNTTDVELAGLDCDKAITVEFKHDDKLS
EETGALMQCAVLYTSCSGQRRLCIHNMAVNCCSQLADLYRNCETDTIINFFSKYALRGIL
NNPTKTVRDTLINQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLLPG
ADVSLDDRAYLRQMISCMDVADTHVFFYPRLLPLMKLESGSLPVAVRNSEERLSKGGVYL
LETGLPPFPWGGGRGQQXLLVNIFGTPSFSQIDPNMTSLPELDNPFSRRLREIIDTFRAK
RSRFMKLMVVKQEDKSELIFKHFLVEDKTASGGASYVDFLCHMHKEIRQLLS
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaccagcacactccaatggcttctccatatggccagccacaatctggctac
actcaccctggctatgcccctctagatggagcctaccctgctccttatgccccctacaat
ggccctgcttctgcctaccaacctggtgtaccgccccaagattattctcctttcacaagc
tttccctctaaagttgtggcagccaccccagtgtctgacctcacctctccccttgactta
ggtcccagtagaggtcctcccacatctgcacctccaccggtctcggcgtctcaagcatat
catcagtacagtcaagggaatgtacagaatggacctccacctatgacacaagcaccttcc
aggcctcctgtaactcagtcgtacaaccagggagcagtgaacttgtcagagcagcactcg
aactacccacaacagtatgtgccccctcccactatgcatcaggtcaccaaccagatgagt
ggcatgcagctcacacctgggtcaccaactctggcagggccaggatgtgttccacctcag
agctcccagccacccatcagtgcgccctactcggctgcaccaccacccacctacacccag
gcccctccaccaacatgctctgctcctacccatccaccacctcccagtggccctgtgccc
tctcaacagtactatggagggcagcatcctccggctcaacatgctttcaactcttctctg
ccccctacttctcagcagcagtttagctcccatgcaccgccaccacctcctactcagcag
acttatcccccatcctccttctcgggttcgatgcctccaaccagtcaagttccggctcca
ccagtgtcccagccacagcagtccttcccacctagccaacctcccttttcttcagccccc
ccagctgtgagccagccagcctttcacgctggtcctccttcctctgctcagggctccttc
caacccagagcaccgcctccttcctctcagcctggaccttttccaccccctgggccttct
cccacctcctctccaactggacagtatccaggccctatgccccctctccaacaaccccct
ccaacccagccattcccttatcactcaggtccaccaccttcaaggactcaaatgcctcct
acttcaatggctcaaagcaaccacctgcctccaggaccacagggccctccagggccccct
gggcccctacagcaacctcagcctagcatgcagggaggatacccacctcagcagaatggt
gcttatggacaggtaagaggccctcagcctggctatgcaggcccttatcctgggcaacca
aactatggagcccctggaccagcaccggctcctgctccaccttcacagaaaagactcgat
ccaaatgccatccccagcccgcaagcgtctgacatgccggccgtgcagaaatcacgacat
agaatagatccagatgctattcccagcccaatccaggtaatagaagatgacaaggccaag
tcaacagagccattcactacaggagtcagaggtcaggctcctccactggtcactaccgac
tttcaggtcaaagaccaaggaaatgccagtcccaggtttattcgctgtacagcgtataat
atgccttgcacatctgatatggccaagcagtctcaagtgccactggctgctgtcattaaa
ccccttgccacgctgccacaagacgagacccctccctatctggtggaccatggtgagggc
ggaccaatccggtgcaaccgctgcaaggcctacatgtgtccatacatgcagttcatcgag
ggaggacgacgcttccagtgtgcgttttgtagctgtgtcacagaggtgcctccgcattac
ttccagcatctggaccacactggtaaaagggtggactgctacgacaggcccgagctttca
ctgggcagctatgagttcctggccactgttgactactgtaagaacaacaaggtccctcag
cctccagccttcatcttccttattgatgtgtcctacaatgctgtaaagtgtggcatggtg
cgcatggtctgccaagaactcaagaatcttattgactacttgcccagggaaaacccagaa
gtggactcggtgatccgagtgggcttcgtcacctacaataaggttttacatttctacaat
gtcaagtcaactatggcgcagccccagatgttggtggtgtccgatgtatcggatatgttc
gtaccgctgctcgatggtttcttagttaatgtaaatgaaagccgaccagttatcgagagt
ttattggaccagatcccagagatgtttgcagaaaccagagagacagagacagtctttgga
cctgtaatccaggcaggactggaagcactgaaggcggcagattgtgccggaaaactcttt
attttccacacctcgttgcccatcgcagaggctccaggaaaactaaaaaaccgagaagac
aaaaagcttattggaacagataaggagaagtcactgtttcagccccaggtgagtttctac
aacacacttgcaaaggagtgtgtggcccagggctgctgtgtggatcttttcctcttccct
aaccaatacgtggacgtcgccacgttatcggttgttcctgtttccacgggtggttcagtc
tacaaatacacgtatttccagactcagacggatcaggagcgattcctgaatgacctctca
cgagacgttcagaaactggtagggtttgatgctgtcatgagggtgcgaactagcacaggg
atcagagcaacagatttctatggctccttcttcatgagtaacaccacagatgtggagttg
gcaggcctggactgtgacaaggccattactgttgagttcaaacatgacgacaagctcagt
gaggagacaggcgctctcatgcagtgtgccgttctctacaccagctgcagcggacagagg
cgcctatgcatccacaacatggccgtcaattgctgctcccagctggctgatctctaccgt
aactgtgagacagatacaatcatcaatttcttctccaaatatgctctccgtgggattctg
aacaaccccaccaagactgtgagagacacactgataaaccagtgtgcgcagatcctggcc
tgctacaggaagaactgtgcaagtccctcatcagctggtcagctgatccttccagagtgc
atgaagctgttaccagtctatctgaactgtgtgctgaagagtgacgtgctgctaccagga
gccgacgtctcactggatgaccgtgcttacctgcgacagatgattagttgcatggatgtt
gcagacacccacgtctttttctacccccgtctgctgccactgatgaagcttgaaagcggc
tctctgccagtggctgtaaggaactcggaagaaaggctctcaaagggtggagtttacctc
ctggagacggggctccccccttttccttggggcgggggccgcggccagcagnngcttctg
gtcaacatttttggcacaccaagcttcagccagatcgaccccaacatgacaagtctgcca
gaattggacaaccctttctctcggagactcagagaaattattgacaccttcagagcaaaa
cgatcacgattcatgaagctgatggtggtgaaacaggaagacaaatctgagctgattttc
aaacactttctggttgaggataagaccgccagcgggggagcctcgtacgtggacttcttg
tgtcacatgcacaaggagattcggcagctgctgagctaa
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