Cynoglossus semilaevis (tongue sole): 103381578
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Entry
103381578 CDS
T04866
Name
(RefSeq) thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04145
Phagosome
csem04510
Focal adhesion
csem04512
ECM-receptor interaction
csem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103381578
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103381578
09144 Cellular community - eukaryotes
04510 Focal adhesion
103381578
09142 Cell motility
04820 Cytoskeleton in muscle cells
103381578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103381578
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csem04147
]
103381578
00536 Glycosaminoglycan binding proteins [BR:
csem00536
]
103381578
Membrane trafficking [BR:
csem04131
]
Endocytosis
Phagocytosis
Opsonins
103381578
Exosome [BR:
csem04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103381578
Exosomal proteins of colorectal cancer cells
103381578
Exosomal proteins of bladder cancer cells
103381578
Glycosaminoglycan binding proteins [BR:
csem00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103381578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
TSP1_CCN
EGF_3
EGF
TSP1_ADAMTS
VWF
Motif
Other DBs
NCBI-GeneID:
103381578
NCBI-ProteinID:
XP_016889470
LinkDB
All DBs
Position
8:2826672..2838853
Genome browser
AA seq
932 aa
AA seq
DB search
FLYAGVDGAKVENVSLEICQHPCKDLVNLLTEIHGLRFVTNNLLEDLEKISKENKEMRFY
LSELNNSSSTGGGGDADNDLDREGGLWCVQDGRAYEPGENWEVDSCTSCTCQHGEVVCDQ
VSCPPVSCINPVFTDEQCCPVCPDNDNDWSPWSEWTHCSVSCGRGGQRRGRSCNDVMLSC
AGPSVQMRSCMIMKCDRKVRSDGNWGLWSPWSACTTTCGEGDITRVRLCNNPPPAKGAKG
CAGSASETQPCNNTLCPIAGGWASWTQWSLCSESCGGGLSSRRRKCSNPAPQNSGKPCAG
DSVDYEACNKQPCPKDMCLLSNPCFPGVACTMHRDGSWECGGCPLGLKGNGTHCEDENEC
EVEGVCVTECVNTDPGFHCLPCPPRYKGTQPYSLGLQAARQIRQVCEPYNPCKDNTHSCH
RYGECVYLGLASEVLYRCVCAVGFAGDGFLCGEDSDLDGWPNSRLTCRRNATYHCQKDNC
PMMPNSGQEDLDNDGQGDACDPDDDNDDIMDERDNCPLVYNPRQYDSDRDGIGDSCDNCP
FESNPLQRDTDENGEGDACSIDIDGDEVLNDHDNCPLVYNTDQRDTDLDGVGDQCDNCPL
LHNPLQLDSDNDLVGDMCDDNEDIDEDGYQNSLDNCPYIANSNQADHDNDGRGDACDHDD
DNDGIPDDRDNCRLVPNKEQLDTDGDGSGEACFDDFDNDTIPDALDPCPLNQEIRSTDFK
KFQVVLLDPKGTTQSDPLWVIRSQGTELLQTANSDPGIALGYDKFSSVDFSVTFYVNTNR
DDDYAGIVFSYQSSQRFYVVMWKQVSQAYWEKKPSKAFGTAGVSIKLVNSTTGPGEDLRN
ALWHTGNTRDQVRTLWHDPNKTGWRDYTAYRMHLIHRPKTGFIRVVVYEGREIMTDSGAV
YDHTLAGGRLGLFVFSQEHVLFSDLRYECRDT
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
ttcctttacgcaggtgtagatggtgcaaaggtcgaaaatgtgtctcttgaaatctgccaa
catccttgcaaggacctggttaatttactgacagagatccatggactgcgatttgtgacc
aacaacctgcttgaagacctagaaaaaatatcaaaggaaaacaaggagatgagattctat
ttgtctgaactgaacaacagcagcagcactggtggaggtggtgatgctgacaatgatctt
gacagagagggagggctgtggtgtgtgcaggatggacgagcgtacgagccgggagagaac
tgggaggttgacagctgcacctcctgtacctgccagcatggagaggtggtgtgcgatcag
gtgtcttgtcctcctgtgtcctgcatcaacccagtcttcactgatgaacagtgctgcccc
gtttgtcctgacaatgacaatgactggtctccgtggtcggagtggacccactgctctgtc
tcctgtggacgcggggggcagagaaggggacgatcgtgcaatgacgtcatgctgtcctgt
gccggtccctcagttcaaatgcggagctgtatgataatgaagtgcgatcggaaggtacgc
agtgacgggaactggggactctggtctccctggtctgcatgtaccaccacatgcggagaa
ggtgacatcacacgggtacgtctgtgcaacaaccctccaccagccaagggggcaaaagga
tgtgcaggcagtgccagtgaaacccaaccgtgcaacaacacactctgtcccattgccgga
ggttgggcaagttggacgcagtggtctttgtgctccgagtcttgtggaggaggtctatcg
agtcgcagaagaaaatgttcaaaccccgcacctcagaacagtgggaagccttgtgctgga
gactccgtggactatgaagcctgtaacaaacagccttgtcctaaagacatgtgtttgctg
tcaaatccatgttttcccggtgtggcttgcactatgcaccgtgatggatcgtgggaatgt
ggaggctgtccattgggtttaaagggcaatggaactcactgtgaagatgaaaatgagtgt
gaagtggagggtgtgtgtgttacagagtgtgtaaacacagaccctgggttccactgtctg
ccctgccctcctcggtataaaggcacacagccttacagcctgggtctgcaggcagcccga
caaatcaggcaggtgtgtgaaccatacaatccttgcaaagacaacacacacagctgccac
aggtatggtgagtgtgtgtaccttggtcttgcatctgaggtcttgtacagatgtgtgtgt
gctgttgggtttgccggggatggctttttgtgtggcgaggactctgacctggacggctgg
cccaacagtagactgacatgcaggcgaaatgcaacctatcactgtcaaaaggataactgc
cctatgatgcccaactctggacaagaggacctggacaatgatggacaaggagacgcctgt
gaccccgatgatgacaatgatgacatcatggatgagagggacaactgcccgctggtatac
aatcctcggcagtacgactcagacagagacgggattggagacagctgtgataactgtccg
tttgagagcaacccactgcagagagatactgacgagaacggagagggagacgcctgcagc
atcgacatagacggggatgaggtcctgaatgaccacgacaactgtccactagtctacaac
actgaccagagagacacagacctggatggtgtcggagaccagtgtgacaactgccccctg
ttacacaacccactgcagctggactctgacaatgacctagtgggggacatgtgtgatgac
aacgaggacatagatgaggacggttaccagaactccttggacaactgtccatacattgcc
aacagcaaccaggcggaccacgataacgacggcagaggggacgcctgtgaccacgacgat
gacaacgacggcatccccgacgaccgggacaactgcagattggtgccaaacaaggagcag
ctggacactgacggtgacggcagtggagaagcctgctttgatgactttgacaacgacact
attccagatgccctggatccgtgtccgctgaatcaggaaattaggtctacagacttcaag
aagtttcaagttgtgttgctggaccccaaaggaaccacacagtctgaccctctttgggta
atccgcagccaagggacagaattactgcagacggccaactcagatcctggaattgctcta
ggatatgacaagttcagctcggtcgacttcagtgtgacgttctatgtgaacaccaaccga
gatgacgactacgcgggcatcgtgttctcgtaccagtcgagtcagcgcttctacgttgtt
atgtggaagcaggtgtcccaggcttactgggagaaaaagccttccaaagcttttggcaca
gcgggagtctccattaaactggtcaactccaccacaggaccaggagaggatctgcgtaat
gctctctggcatacaggaaataccagagaccaggtcaggacgctgtggcacgaccccaat
aaaactggctggagagactacacagcttatcgcatgcacctgatccatagacctaagact
ggctttatcagggtggtggtgtacgagggcagggagattatgactgattcaggagcggtg
tacgaccacaccttggccggcggcagactgggattgttcgtcttctcccaggagcacgtg
ctcttctcggacctcagatatgagtgcagagatacctga
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