Cynoglossus semilaevis (tongue sole): 103381857
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Entry
103381857 CDS
T04866
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like isoform X2
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103381857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csem03041
]
103381857
Enzymes [BR:
csem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103381857
Spliceosome [BR:
csem03041
]
Complex C
Other components
Step II factors
103381857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
S1
DEAD
AAA_22
Flavi_DEAD
AAA_19
nSTAND3
AAA_16
T2SSE
TsaE
AAA_30
Motif
Other DBs
NCBI-GeneID:
103381857
NCBI-ProteinID:
XP_008312639
LinkDB
All DBs
Position
8:7725814..7741364
Genome browser
AA seq
1092 aa
AA seq
DB search
MRSTPSTSKGEKDKLKEKYPALCKPDDPVWMIPPSTTDNNDAEVAAAAMKQLEMLMPNVS
RIISDNSDRGREADRATGCKRGRSRSRSRERVGETIHKRRRKRPSRWSDCPPSPVKDKVE
EERCPDRPLAHPLPEEPVMGDIYDGKISSIMQFGCFVQLEGLRKCWEGLVHVSELRKEGR
VANVADVVANGQKVKVKVLLFTGSKTSLSMKDVDQETGEDLNPNRRKNLEPGVREEVLRN
PDQPTQASVLELEENSSEHKRLTKITDLEKWEIKQMIAANVLAKEEFPEFDEETGILPKI
DDDEDQDVEIDLVEEEPPFLRGQTKWTLNMSPVRIVKNPDGSLSQAAMMQSALSKERKEQ
KQAMRAAEMDCIPTGLNKNWIDPMPDYEGRQIAANMRGIVAAMPIDLPEWKRYALGGNQV
SYGKKTELSILQQRASLPIFKLKAELIQAVHDNQILIVVGETGSGKTTQITQYLAEAGYT
ARGKRGSTQPGRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTCTETVIKYMTHGMLQR
ECLIDPDMSQYGVIMLDEAHERTIHTDVLFGLLKKTIQKRKDLKLIVSSATLDAVKFSQY
FFEAPIFTIPGRTFPVEILYTREPETDYLDASLLTVMQIHLTEPPGDILVFLTGQEEIDT
ACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFNPAPPGSRKVIIATNIAETSLTI
DGIFYVVDPGFVKQVVYNSKTGIDQLLVTPISQAQAKQRSGRAGRTGPGKCYRLYTERAH
RDEMLVSNVPEIQRTNLASTVLSLKAMGINDLLAFDFMDAPPMETLITAMEQLYSLGALD
DEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNIFYRPKEKQAQA
DQKKTKFFQPEGDHLTLLAVYNSWKNNKFSNPWCFENFIQGRSLKRAQDIRKQMLSIMDR
HKLDVVSCGKNTVRVQKAICSGFFRNAARKHPQDGYRTVIDQQVVYLHPSSTLFNRQPEW
LVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFRIADPTRLSRQKRQQKLEPLYNRYEEP
NAWRISRAFRRR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgcggtccacgccgtctacgagtaaaggtgagaaggacaaattgaaggagaaatatcct
gctttatgtaaacctgatgaccctgtgtggatgattcctccttctaccacagacaacaat
gatgcagaggtggctgcagctgcaatgaagcagttggaaatgctgatgcctaatgtcagt
agaataatctcagataacagtgacagaggtcgagaagcagacagagcaactggatgtaag
cgaggtcgatctcgttccagatcaagagaacgtgtgggcgagaccattcacaaacgtaga
aggaaaagaccatctcgctggagtgactgtccaccaagtccagtcaaagacaaggtggag
gaggagcgctgtcctgatagaccgttagctcaccctctgccagaagagccagtcatggga
gacatctatgacggcaaaatcagtagtattatgcaatttggttgtttcgtgcagctggaa
ggcctcaggaaatgctgggagggtctggtgcatgtatcagagctgcgcaaagaagggcgt
gtagcaaatgtggctgatgtggtagccaatggtcaaaaagtgaaggtcaaagtgctgctg
tttacaggaagcaaaacaagcctcagcatgaaggatgttgaccaggagacaggagaggac
ctgaaccccaaccgacgaaaaaaccttgaacctggagttagagaggaagtcttaagaaac
cctgaccagcccactcaggccagcgtgctagaactagaggaaaactcctcagaacacaaa
cgtctgaccaaaataactgacctggaaaaatgggaaatcaaacagatgattgcggcaaat
gttcttgctaaagaggagtttcccgagtttgatgaggagacgggaatccttcccaaaata
gatgatgacgaagatcaagatgtagagattgatctggtggaagaagagccaccattcctc
agaggacaaaccaagtggactttgaacatgagtccagtcagaatagtgaagaatcctgat
ggctccctctcccaggcagccatgatgcaaagcgctctctctaaggagaggaaagagcag
aagcaggcgatgcgtgcagcagagatggactgcatccctactgggctaaacaagaactgg
atcgacccaatgcctgattatgaaggaaggcagattgctgccaacatgagaggcatcgta
gcggcaatgcccattgatcttccagagtggaagagatatgccctcggaggaaaccaggtg
tcgtacggcaagaagacagaactgtccatcctgcagcagagagcgagtctgcctattttc
aagctcaaggcagagctcattcaggctgttcatgacaatcagattctgattgtagttgga
gaaactgggtctggtaagaccacacaaatcactcagtatctggcagaagcgggctacaca
gccagggggaagaggggctccactcagcccggtcgtgtagcagccatgtcagtggccaag
agagtctctgaggagtttgggtgccgtctgggtcaagaggtgggttacactatccgtttt
gaagactgcacctgtacagagacggttatcaagtacatgacccacggcatgctgcagagg
gagtgtctgatcgacccagacatgagtcagtacggagtcatcatgctcgacgaggcccat
gagagaacaattcacactgatgtgctgtttggtctgttgaaaaagacgatacagaaacgc
aaagacttgaagctgattgtgtcctctgctacactggatgccgtcaaattctcccagtat
ttctttgaagcccccatcttcacaatcccaggaagaactttcccagttgaaattctctac
accagagagccagagacggactacctggatgccagtctcttaacggtcatgcagatccac
ttgacagaaccaccaggtgacatcctggtgtttctaactggacaggaggagattgacacg
gcctgtgagatcctttatgaacggatgaagtcactgggccctgatgttcctgagctgatt
attctgccagtttattctgctctgcccagtgagatgcagaccaggatctttaatcctgca
cctccaggcagcagaaaggtcatcatcgccacaaatattgccgagacgtctctgaccatt
gatggtatcttctatgtagtggacccaggttttgttaagcaggtcgtatataattccaag
actggcatcgatcagcttctggtgaccccgatatcacaggcacaagcaaagcagaggtcg
ggtcgagctggcaggacaggccccggaaagtgctacagactctacacagaaagagcccac
agagatgaaatgctagtgtccaacgttccagagatccagaggacaaacttggccagcact
gtgctgtctttaaaggccatgggtatcaatgacctcctggcctttgacttcatggatgct
cctcccatggagactttgatcacagctatggagcagctgtactcactgggagctctggat
gatgagggtttactgacaaggctgggcagaaggatggcagagtttcctcttgaacccatg
ctgtgtaagatgttgattatgtctgtccacctgggctgcagtgaagagatgctcaccata
gtgtcaatgctgtctgttcagaacattttctacagacctaaggaaaagcaggcccaggct
gaccagaagaagaccaaattcttccagcctgagggagaccacctcactcttttggcggtt
tacaactcctggaagaacaacaagttctctaacccctggtgtttcgagaacttcatccag
gggagatcccttaagagggctcaagacattcgaaaacagatgctgagcatcatggacagg
cataagttggacgtggtttcttgcggaaaaaatacagtgcgagtccaaaaagcgatctgc
agcggtttcttcagaaacgcggccaggaagcatcctcaggacgggtatcgtaccgttatt
gaccagcaggtggtgtacctgcacccgtccagcacgctcttcaaccgacagcctgagtgg
cttgtgtaccacgagttggtactgaccactaaagagtacatgagggaggtgaccaccatc
gatccccgctggttggtggagtttgctccagccttcttcagaattgccgaccccactcgc
ctcagcagacagaagaggcagcagaaactggaacctctctacaaccgatacgaagaaccg
aacgcttggagaatctctcgtgcctttaggcgacgatga
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